Incidental Mutation 'IGL00953:Cdyl2'
| ID |
28049 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Cdyl2
|
| Ensembl Gene |
ENSMUSG00000031758 |
| Gene Name |
chromodomain protein, Y chromosome-like 2 |
| Synonyms |
1700029M19Rik, 4930453I21Rik |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.127)
|
| Stock # |
IGL00953
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
8 |
| Chromosomal Location |
117301139-117459730 bp(-) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
T to A
at 117321928 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000104730
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000109102]
|
| AlphaFold |
Q9D5D8 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000109102
|
| SMART Domains |
Protein: ENSMUSP00000104730
Gene: ENSMUSG00000031758
| Domain | Start | End | E-Value | Type |
|---|
|
CHROMO
|
6 |
60 |
1.25e-17 |
SMART |
|
Pfam:ECH_1
|
252 |
499 |
5e-33 |
PFAM |
|
Pfam:ECH_2
|
258 |
501 |
1.6e-14 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 34 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aatk |
T |
C |
11: 119,902,047 (GRCm39) |
E726G |
probably benign |
Het |
| Cep41 |
T |
C |
6: 30,660,966 (GRCm39) |
T109A |
probably benign |
Het |
| Clca3b |
C |
T |
3: 144,552,972 (GRCm39) |
W84* |
probably null |
Het |
| Cyp27b1 |
A |
G |
10: 126,885,551 (GRCm39) |
D130G |
probably benign |
Het |
| Cyp2f2 |
T |
C |
7: 26,829,242 (GRCm39) |
V249A |
possibly damaging |
Het |
| Cyth3 |
G |
A |
5: 143,692,920 (GRCm39) |
|
probably null |
Het |
| Dnah8 |
G |
T |
17: 30,925,431 (GRCm39) |
E1289* |
probably null |
Het |
| Fam171a1 |
A |
T |
2: 3,179,327 (GRCm39) |
D51V |
possibly damaging |
Het |
| Farp2 |
A |
G |
1: 93,488,896 (GRCm39) |
R107G |
possibly damaging |
Het |
| Gemin6 |
T |
C |
17: 80,535,294 (GRCm39) |
F85L |
possibly damaging |
Het |
| Hivep3 |
A |
C |
4: 119,955,571 (GRCm39) |
T1296P |
probably damaging |
Het |
| Hnrnpm |
C |
A |
17: 33,868,876 (GRCm39) |
R517L |
probably damaging |
Het |
| Htt |
T |
A |
5: 34,976,021 (GRCm39) |
S670T |
probably benign |
Het |
| Klhl24 |
A |
T |
16: 19,941,717 (GRCm39) |
N555I |
possibly damaging |
Het |
| Limd1 |
T |
A |
9: 123,308,948 (GRCm39) |
S216T |
probably benign |
Het |
| Lmf2 |
A |
T |
15: 89,238,102 (GRCm39) |
I234N |
probably damaging |
Het |
| Mrpl4 |
C |
A |
9: 20,919,863 (GRCm39) |
D271E |
probably benign |
Het |
| Mydgf |
C |
T |
17: 56,486,407 (GRCm39) |
G75R |
probably damaging |
Het |
| Nat1 |
A |
G |
8: 67,943,630 (GRCm39) |
D5G |
possibly damaging |
Het |
| Or2t46 |
T |
C |
11: 58,472,636 (GRCm39) |
V322A |
probably benign |
Het |
| Or5h22 |
A |
T |
16: 58,895,052 (GRCm39) |
Y130* |
probably null |
Het |
| Or5k15 |
A |
C |
16: 58,710,048 (GRCm39) |
H178Q |
probably damaging |
Het |
| Pla2g4c |
T |
A |
7: 13,077,951 (GRCm39) |
M363K |
probably benign |
Het |
| Prex1 |
A |
G |
2: 166,480,329 (GRCm39) |
F137S |
probably damaging |
Het |
| Rbm12b1 |
A |
G |
4: 12,146,038 (GRCm39) |
D670G |
probably damaging |
Het |
| Rrp12 |
C |
A |
19: 41,860,231 (GRCm39) |
M997I |
possibly damaging |
Het |
| Scn3a |
A |
G |
2: 65,327,736 (GRCm39) |
V918A |
probably benign |
Het |
| Slc35g2 |
A |
G |
9: 100,434,516 (GRCm39) |
V385A |
probably damaging |
Het |
| Slit1 |
A |
T |
19: 41,590,739 (GRCm39) |
I1311N |
probably damaging |
Het |
| Ube2j2 |
C |
T |
4: 156,030,834 (GRCm39) |
|
probably benign |
Het |
| Ucp2 |
A |
G |
7: 100,147,629 (GRCm39) |
T203A |
probably benign |
Het |
| Upk1b |
C |
T |
16: 38,600,347 (GRCm39) |
G211D |
possibly damaging |
Het |
| Vmn1r220 |
A |
T |
13: 23,367,935 (GRCm39) |
F254I |
probably benign |
Het |
| Zcchc4 |
T |
C |
5: 52,965,638 (GRCm39) |
F314S |
probably damaging |
Het |
|
| Other mutations in Cdyl2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01670:Cdyl2
|
APN |
8 |
117,351,092 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01964:Cdyl2
|
APN |
8 |
117,350,768 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02148:Cdyl2
|
APN |
8 |
117,315,983 (GRCm39) |
splice site |
probably benign |
|
|
IGL02186:Cdyl2
|
APN |
8 |
117,306,025 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
Allein
|
UTSW |
8 |
117,305,935 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0449:Cdyl2
|
UTSW |
8 |
117,309,931 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0630:Cdyl2
|
UTSW |
8 |
117,350,774 (GRCm39) |
missense |
probably benign |
0.03 |
|
R1430:Cdyl2
|
UTSW |
8 |
117,306,056 (GRCm39) |
splice site |
probably benign |
|
|
R1883:Cdyl2
|
UTSW |
8 |
117,321,902 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2326:Cdyl2
|
UTSW |
8 |
117,350,537 (GRCm39) |
missense |
probably benign |
|
|
R4194:Cdyl2
|
UTSW |
8 |
117,305,903 (GRCm39) |
splice site |
probably null |
|
|
R4916:Cdyl2
|
UTSW |
8 |
117,305,926 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4977:Cdyl2
|
UTSW |
8 |
117,302,008 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5092:Cdyl2
|
UTSW |
8 |
117,350,679 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
R5320:Cdyl2
|
UTSW |
8 |
117,321,794 (GRCm39) |
nonsense |
probably null |
|
|
R5727:Cdyl2
|
UTSW |
8 |
117,309,907 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5830:Cdyl2
|
UTSW |
8 |
117,321,823 (GRCm39) |
missense |
probably benign |
0.23 |
|
R6077:Cdyl2
|
UTSW |
8 |
117,316,129 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6086:Cdyl2
|
UTSW |
8 |
117,316,035 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6145:Cdyl2
|
UTSW |
8 |
117,321,717 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6380:Cdyl2
|
UTSW |
8 |
117,309,923 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7152:Cdyl2
|
UTSW |
8 |
117,351,066 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7193:Cdyl2
|
UTSW |
8 |
117,350,733 (GRCm39) |
missense |
probably benign |
0.09 |
|
R7244:Cdyl2
|
UTSW |
8 |
117,301,999 (GRCm39) |
nonsense |
probably null |
|
|
R7394:Cdyl2
|
UTSW |
8 |
117,350,790 (GRCm39) |
missense |
not run |
|
|
R7457:Cdyl2
|
UTSW |
8 |
117,305,935 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8770:Cdyl2
|
UTSW |
8 |
117,321,822 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9574:Cdyl2
|
UTSW |
8 |
117,350,669 (GRCm39) |
missense |
probably benign |
0.00 |
|
| Posted On |
2013-04-17 |
Incidental Mutation