Incidental Mutation 'IGL02141:Luc7l'
ID 281563
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Luc7l
Ensembl Gene ENSMUSG00000024188
Gene Name Luc7-like
Synonyms 2410018D03Rik, 1810045C04Rik
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.258) question?
Stock # IGL02141
Quality Score
Status
Chromosome 17
Chromosomal Location 26471870-26504478 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to A at 26472054 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Lysine at position 17 (T17K)
Ref Sequence ENSEMBL: ENSMUSP00000113405 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000025023] [ENSMUST00000114976] [ENSMUST00000119928] [ENSMUST00000140427] [ENSMUST00000148894] [ENSMUST00000154235] [ENSMUST00000155151]
AlphaFold Q9CYI4
Predicted Effect probably damaging
Transcript: ENSMUST00000025023
AA Change: T17K

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000025023
Gene: ENSMUSG00000024188
AA Change: T17K

DomainStartEndE-ValueType
Pfam:LUC7 4 260 3.1e-95 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000114976
AA Change: T17K

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000110627
Gene: ENSMUSG00000024188
AA Change: T17K

DomainStartEndE-ValueType
Pfam:LUC7 5 249 2.5e-85 PFAM
low complexity region 327 336 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000119928
AA Change: T17K

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000113405
Gene: ENSMUSG00000024188
AA Change: T17K

DomainStartEndE-ValueType
Pfam:LUC7 4 260 3.1e-95 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000129226
Predicted Effect noncoding transcript
Transcript: ENSMUST00000133032
Predicted Effect probably benign
Transcript: ENSMUST00000140427
SMART Domains Protein: ENSMUSP00000122258
Gene: ENSMUSG00000024188

DomainStartEndE-ValueType
Pfam:LUC7 1 168 1.5e-54 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000148894
AA Change: T17K

PolyPhen 2 Score 0.869 (Sensitivity: 0.83; Specificity: 0.93)
Predicted Effect unknown
Transcript: ENSMUST00000154235
AA Change: T17K
Predicted Effect probably benign
Transcript: ENSMUST00000155151
SMART Domains Protein: ENSMUSP00000120409
Gene: ENSMUSG00000024188

DomainStartEndE-ValueType
Pfam:LUC7 1 69 7.4e-23 PFAM
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The LUC7L gene may represent a mammalian heterochromatic gene, encoding a putative RNA-binding protein similar to the yeast Luc7p subunit of the U1 snRNP splicing complex that is normally required for 5-prime splice site selection (Tufarelli et al., 2001 [PubMed 11170747]).[supplied by OMIM, Mar 2008]
PHENOTYPE: Mice homozygous for a mutant allele producing a truncated product lacked any obvious phenotypic abnormalities. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 57 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700001J03Rik C T 5: 146,120,275 (GRCm39) A188T probably benign Het
2310022B05Rik A T 8: 125,364,645 (GRCm39) probably benign Het
Atf6b C A 17: 34,872,251 (GRCm39) H539Q probably benign Het
Bmal2 T A 6: 146,729,593 (GRCm39) probably benign Het
Bpifb5 G T 2: 154,071,477 (GRCm39) probably null Het
Cep89 T A 7: 35,120,349 (GRCm39) M377K probably damaging Het
Clpx G T 9: 65,219,400 (GRCm39) probably null Het
Cops5 T C 1: 10,105,342 (GRCm39) K47E probably damaging Het
Cryba2 T C 1: 74,931,943 (GRCm39) N35S probably benign Het
Ddx27 A G 2: 166,862,443 (GRCm39) K162E possibly damaging Het
Dhx36 A G 3: 62,401,310 (GRCm39) S319P probably benign Het
Dram2 A G 3: 106,479,012 (GRCm39) probably benign Het
Eci2 T A 13: 35,162,656 (GRCm39) T300S probably benign Het
Egf C A 3: 129,533,631 (GRCm39) G70* probably null Het
Eif5b T C 1: 38,071,403 (GRCm39) V444A probably benign Het
Elf3 T C 1: 135,185,445 (GRCm39) D23G possibly damaging Het
Epb41l4b A T 4: 57,103,422 (GRCm39) probably null Het
Fam167a T A 14: 63,689,708 (GRCm39) S2T probably benign Het
Flrt3 A G 2: 140,502,608 (GRCm39) V340A probably damaging Het
Gimap3 T C 6: 48,742,312 (GRCm39) E206G probably benign Het
Gp6 T C 7: 4,397,103 (GRCm39) probably benign Het
Gpr158 A T 2: 21,788,101 (GRCm39) M581L probably damaging Het
Hapln3 A G 7: 78,767,893 (GRCm39) V167A probably damaging Het
Hnrnpll G A 17: 80,358,142 (GRCm39) T203I probably benign Het
Ighv3-6 A G 12: 114,251,982 (GRCm39) I47T probably damaging Het
Iqgap1 G A 7: 80,387,869 (GRCm39) T926M probably damaging Het
Lonp1 A T 17: 56,922,086 (GRCm39) S765T probably benign Het
Lpp C T 16: 24,580,365 (GRCm39) S27F probably damaging Het
Lrit2 T C 14: 36,790,031 (GRCm39) probably benign Het
Mmut A G 17: 41,249,708 (GRCm39) T228A possibly damaging Het
Mroh1 G T 15: 76,330,799 (GRCm39) S1161I possibly damaging Het
Muc5b T G 7: 141,407,104 (GRCm39) C1091G unknown Het
Nppb A T 4: 148,070,463 (GRCm39) I11F probably benign Het
Nsf A T 11: 103,719,351 (GRCm39) D650E probably benign Het
Ogdh A G 11: 6,305,015 (GRCm39) K907E probably damaging Het
Or1b1 G A 2: 36,995,437 (GRCm39) S75F probably benign Het
Or1j15 A G 2: 36,458,820 (GRCm39) D70G probably damaging Het
Or7a35 A G 10: 78,853,555 (GRCm39) Y133C probably damaging Het
Pcnx1 A T 12: 81,907,156 (GRCm39) Q4L possibly damaging Het
Pgc T A 17: 48,037,856 (GRCm39) L9H probably damaging Het
Pikfyve T A 1: 65,285,556 (GRCm39) S887T probably benign Het
Plec T C 15: 76,059,815 (GRCm39) D3239G probably damaging Het
Pole4 T C 6: 82,625,015 (GRCm39) T116A probably benign Het
Potegl T C 2: 23,120,212 (GRCm39) F203L probably damaging Het
Prpf8 A G 11: 75,381,498 (GRCm39) N300D possibly damaging Het
Rara T A 11: 98,858,907 (GRCm39) Y119N probably damaging Het
Rbck1 G T 2: 152,160,294 (GRCm39) R462S possibly damaging Het
Setdb2 C T 14: 59,639,764 (GRCm39) R709Q probably damaging Het
Slfn2 C A 11: 82,960,670 (GRCm39) N216K probably benign Het
Suox A G 10: 128,507,967 (GRCm39) probably benign Het
Tars1 T A 15: 11,391,280 (GRCm39) Y283F probably damaging Het
Trpm4 A T 7: 44,967,603 (GRCm39) probably null Het
Ubtd2 A T 11: 32,449,262 (GRCm39) K36N probably benign Het
Unkl T C 17: 25,448,408 (GRCm39) L327P probably damaging Het
Vmn1r11 T A 6: 57,114,364 (GRCm39) Y9* probably null Het
Vps13b T C 15: 35,572,227 (GRCm39) V948A probably benign Het
Zbtb17 A G 4: 141,192,264 (GRCm39) H403R probably damaging Het
Other mutations in Luc7l
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02054:Luc7l APN 17 26,498,314 (GRCm39) utr 3 prime probably benign
R0658:Luc7l UTSW 17 26,485,296 (GRCm39) missense probably damaging 1.00
R1114:Luc7l UTSW 17 26,494,832 (GRCm39) splice site probably benign
R1868:Luc7l UTSW 17 26,499,030 (GRCm39) utr 3 prime probably benign
R2112:Luc7l UTSW 17 26,474,101 (GRCm39) critical splice donor site probably null
R2286:Luc7l UTSW 17 26,499,020 (GRCm39) utr 3 prime probably benign
R2864:Luc7l UTSW 17 26,485,335 (GRCm39) missense probably damaging 1.00
R2865:Luc7l UTSW 17 26,485,335 (GRCm39) missense probably damaging 1.00
R3040:Luc7l UTSW 17 26,496,593 (GRCm39) utr 3 prime probably benign
R4319:Luc7l UTSW 17 26,496,593 (GRCm39) utr 3 prime probably benign
R4384:Luc7l UTSW 17 26,498,936 (GRCm39) splice site probably benign
R5160:Luc7l UTSW 17 26,486,271 (GRCm39) missense probably benign 0.27
R5330:Luc7l UTSW 17 26,494,707 (GRCm39) nonsense probably null
R5331:Luc7l UTSW 17 26,494,707 (GRCm39) nonsense probably null
R7220:Luc7l UTSW 17 26,472,219 (GRCm39) start gained probably benign
R7418:Luc7l UTSW 17 26,472,156 (GRCm39) unclassified probably benign
R7559:Luc7l UTSW 17 26,474,089 (GRCm39) missense probably damaging 1.00
R8077:Luc7l UTSW 17 26,474,047 (GRCm39) missense probably damaging 1.00
R8203:Luc7l UTSW 17 26,485,333 (GRCm39) missense possibly damaging 0.95
R8895:Luc7l UTSW 17 26,472,978 (GRCm39) missense possibly damaging 0.46
X0026:Luc7l UTSW 17 26,496,549 (GRCm39) missense probably damaging 1.00
Z1088:Luc7l UTSW 17 26,486,229 (GRCm39) missense probably damaging 0.96
Z1177:Luc7l UTSW 17 26,500,635 (GRCm39) missense unknown
Posted On 2015-04-16