Mutagenetix > Incidental Mutations

Incidental Mutation 'IGL02159:Lrrc41'

282359

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Lrrc41

Ensembl Gene

ENSMUSG00000028703

Gene Name

leucine rich repeat containing 41

Synonyms

D730026A16Rik, MUF1, D630045E04Rik

Accession Numbers

Is this an essential gene?

Possibly essential (E-score: 0.502) question?

Stock #

IGL02159

Quality Score

Status

Chromosome

Chromosomal Location

116075269-116097043 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 116088486 bp

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Isoleucine at position 133 (F133I)

Ref Sequence

ENSEMBL: ENSMUSP00000030471 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030471]

Predicted Effect

probably benign
Transcript: ENSMUST00000030471
AA Change: F133I

PolyPhen 2 Score 0.027 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000030471
Gene: ENSMUSG00000028703
AA Change: F133I

Domain	Start	End	E-Value	Type
low complexity region	30	45	N/A	INTRINSIC
low complexity region	280	291	N/A	INTRINSIC
low complexity region	314	325	N/A	INTRINSIC
low complexity region	352	382	N/A	INTRINSIC
low complexity region	417	429	N/A	INTRINSIC
SCOP:d1yrga_	449	742	4e-12	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000133799

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000134983

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000138952

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 43 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700017N19Rik	T	C	10: 100,610,665	L257S	probably damaging	Het
2210010C04Rik	T	C	6: 41,032,957	T148A	probably benign	Het
Abca13	A	G	11: 9,314,545	S2976G	probably benign	Het
Afmid	T	C	11: 117,836,426	W267R	probably damaging	Het
Ahi1	A	G	10: 21,058,177	K969R	probably benign	Het
Aldh1l1	A	G	6: 90,594,656		probably benign	Het
Ank3	A	G	10: 69,808,892	H62R	probably damaging	Het
Arid2	T	C	15: 96,358,912		probably benign	Het
BC030867	G	A	11: 102,260,165		probably null	Het
Caps2	G	A	10: 112,204,023	V457M	probably benign	Het
Capza1	T	C	3: 104,864,371	D3G	possibly damaging	Het
Cav1	T	A	6: 17,307,972	V41E	possibly damaging	Het
Celf2	G	T	2: 6,604,177	C264*	probably null	Het
Clec4a2	C	T	6: 123,139,326	S150L	probably benign	Het
D7Ertd443e	A	T	7: 134,349,400	D181E	possibly damaging	Het
Epyc	A	G	10: 97,670,631	E100G	probably benign	Het
Hdac11	A	G	6: 91,173,102	I294M	probably damaging	Het
Hsdl1	A	G	8: 119,566,414	V73A	probably benign	Het
Kmt2c	A	T	5: 25,311,343	S2501T	probably benign	Het
Map3k19	C	A	1: 127,823,170	G815C	probably benign	Het
Muc13	C	A	16: 33,799,479	T199K	unknown	Het
Nif3l1	G	T	1: 58,447,946		probably null	Het
Nlrp12	A	T	7: 3,249,545		probably benign	Het
Nup205	T	C	6: 35,189,178	S244P	probably damaging	Het
Olfr1353	A	T	10: 78,969,901	N84I	probably damaging	Het
Parl	G	A	16: 20,280,088		probably benign	Het
Pax8	A	G	2: 24,440,788	I211T	possibly damaging	Het
Pglyrp4	A	G	3: 90,730,853	E158G	possibly damaging	Het
Plekhm1	A	G	11: 103,380,231	L478P	probably benign	Het
Serpina1a	C	T	12: 103,854,706	G338R	probably damaging	Het
Serpina5	T	C	12: 104,105,298	L388P	possibly damaging	Het
Sorbs1	A	G	19: 40,327,596	V367A	probably damaging	Het
Srgap2	A	G	1: 131,319,666		probably benign	Het
Surf1	A	G	2: 26,915,651	L26P	probably damaging	Het
Taf4	A	G	2: 179,938,470	S486P	probably benign	Het
Tdrd6	A	T	17: 43,628,390	V589E	probably damaging	Het
Tuba3b	T	G	6: 145,619,666	S287A	probably benign	Het
Txnrd3	G	A	6: 89,669,324	R295H	probably damaging	Het
Ubr5	G	T	15: 37,991,379		probably benign	Het
Unc45b	C	T	11: 82,940,181		probably benign	Het
Usp32	A	G	11: 85,005,802		probably null	Het
Utp23	G	A	15: 51,882,365	R87K	probably benign	Het
Vps8	T	C	16: 21,466,484	I405T	possibly damaging	Het

Other mutations in Lrrc41

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01309:Lrrc41	APN	4	116096466	missense	probably damaging	0.97
IGL01358:Lrrc41	APN	4	116075587	missense	probably benign	0.16
IGL01734:Lrrc41	APN	4	116093134	critical splice donor site	probably null
IGL01986:Lrrc41	APN	4	116089322	missense	probably benign	0.27
IGL02892:Lrrc41	APN	4	116088835	missense	possibly damaging	0.68
IGL03135:Lrrc41	APN	4	116088531	missense	probably benign
R1478:Lrrc41	UTSW	4	116095208	nonsense	probably null
R1765:Lrrc41	UTSW	4	116089051	missense	possibly damaging	0.94
R2233:Lrrc41	UTSW	4	116096385	missense	possibly damaging	0.66
R4080:Lrrc41	UTSW	4	116080546	splice site	probably null
R4677:Lrrc41	UTSW	4	116095135	missense	probably benign
R4833:Lrrc41	UTSW	4	116093177	unclassified	probably benign
R4877:Lrrc41	UTSW	4	116079405	missense	probably damaging	0.99
R4926:Lrrc41	UTSW	4	116089324	missense	possibly damaging	0.46
R6459:Lrrc41	UTSW	4	116088780	missense	possibly damaging	0.95
R6817:Lrrc41	UTSW	4	116089305	missense	possibly damaging	0.66
R6834:Lrrc41	UTSW	4	116096529	missense	possibly damaging	0.46
R7479:Lrrc41	UTSW	4	116089041	missense	probably damaging	0.96
R7512:Lrrc41	UTSW	4	116092994	missense	possibly damaging	0.66
R7593:Lrrc41	UTSW	4	116092944	missense	possibly damaging	0.94
R8006:Lrrc41	UTSW	4	116094888	missense	possibly damaging	0.79

Posted On

2015-04-16