Incidental Mutation 'IGL00912:Cep83'
ID |
28317 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Cep83
|
Ensembl Gene |
ENSMUSG00000020024 |
Gene Name |
centrosomal protein 83 |
Synonyms |
4921537D05Rik, Ccdc41, 5730513H21Rik, 2600001G24Rik |
Accession Numbers |
|
Is this an essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
IGL00912
|
Quality Score |
|
Status
|
|
Chromosome |
10 |
Chromosomal Location |
94688654-94790853 bp(+) (GRCm38) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
C to T
at 94737866 bp (GRCm38)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Arginine to Stop codon
at position 206
(R206*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000020212
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000020212]
|
AlphaFold |
Q9D5R3 |
Predicted Effect |
probably null
Transcript: ENSMUST00000020212
AA Change: R206*
|
SMART Domains |
Protein: ENSMUSP00000020212 Gene: ENSMUSG00000020024 AA Change: R206*
Domain | Start | End | E-Value | Type |
coiled coil region
|
31 |
100 |
N/A |
INTRINSIC |
coiled coil region
|
121 |
602 |
N/A |
INTRINSIC |
coiled coil region
|
656 |
689 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000218076
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000220052
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a centriolar protein involved in primary cilium assembly. Defects in this gene have been associated with infantile nephronophthisis and intellectual disability. [provided by RefSeq, Oct 2016]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 12 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
A2ml1 |
C |
T |
6: 128,552,307 |
M957I |
probably benign |
Het |
H3f3b |
A |
T |
11: 116,023,444 |
I125N |
probably damaging |
Het |
Hnrnpm |
C |
A |
17: 33,649,902 |
R517L |
probably damaging |
Het |
Jag1 |
G |
A |
2: 137,115,573 |
T73M |
probably damaging |
Het |
Mrps35 |
T |
A |
6: 147,055,921 |
I148N |
possibly damaging |
Het |
Nostrin |
G |
A |
2: 69,182,819 |
|
probably benign |
Het |
Rer1 |
A |
G |
4: 155,082,665 |
|
probably null |
Het |
Scaper |
A |
G |
9: 55,685,955 |
L466S |
probably damaging |
Het |
Tmem87a |
T |
C |
2: 120,403,936 |
D42G |
possibly damaging |
Het |
Ttn |
G |
T |
2: 76,738,832 |
T27239K |
probably damaging |
Het |
Ugt3a1 |
G |
A |
15: 9,310,612 |
V327M |
probably damaging |
Het |
Vmn2r100 |
A |
G |
17: 19,531,392 |
T566A |
possibly damaging |
Het |
|
Other mutations in Cep83 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00671:Cep83
|
APN |
10 |
94789764 |
missense |
possibly damaging |
0.77 |
IGL01141:Cep83
|
APN |
10 |
94788757 |
missense |
probably benign |
0.39 |
R0358:Cep83
|
UTSW |
10 |
94719731 |
missense |
probably benign |
|
R0530:Cep83
|
UTSW |
10 |
94719588 |
splice site |
probably benign |
|
R0579:Cep83
|
UTSW |
10 |
94749053 |
missense |
possibly damaging |
0.58 |
R1140:Cep83
|
UTSW |
10 |
94737890 |
missense |
probably damaging |
1.00 |
R1573:Cep83
|
UTSW |
10 |
94788663 |
missense |
probably damaging |
1.00 |
R1756:Cep83
|
UTSW |
10 |
94750267 |
missense |
probably damaging |
1.00 |
R3121:Cep83
|
UTSW |
10 |
94786838 |
missense |
probably damaging |
1.00 |
R3684:Cep83
|
UTSW |
10 |
94786825 |
missense |
probably benign |
0.01 |
R5115:Cep83
|
UTSW |
10 |
94768889 |
missense |
probably benign |
|
R5325:Cep83
|
UTSW |
10 |
94737906 |
missense |
probably damaging |
0.98 |
R5439:Cep83
|
UTSW |
10 |
94789738 |
missense |
probably benign |
0.03 |
R5782:Cep83
|
UTSW |
10 |
94749032 |
missense |
probably damaging |
1.00 |
R5891:Cep83
|
UTSW |
10 |
94725675 |
missense |
probably benign |
0.12 |
R7229:Cep83
|
UTSW |
10 |
94719665 |
missense |
probably damaging |
1.00 |
R7632:Cep83
|
UTSW |
10 |
94750640 |
missense |
probably damaging |
1.00 |
R7953:Cep83
|
UTSW |
10 |
94737942 |
missense |
probably damaging |
0.99 |
R8043:Cep83
|
UTSW |
10 |
94737942 |
missense |
probably damaging |
0.99 |
R8167:Cep83
|
UTSW |
10 |
94728717 |
missense |
possibly damaging |
0.56 |
R8171:Cep83
|
UTSW |
10 |
94768935 |
missense |
possibly damaging |
0.83 |
R8409:Cep83
|
UTSW |
10 |
94737977 |
nonsense |
probably null |
|
R9079:Cep83
|
UTSW |
10 |
94728679 |
missense |
possibly damaging |
0.62 |
R9195:Cep83
|
UTSW |
10 |
94768939 |
missense |
possibly damaging |
0.90 |
|
Posted On |
2013-04-17 |