Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02192:Trim34a'

283922

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Trim34a

Ensembl Gene

ENSMUSG00000056144

Gene Name

tripartite motif-containing 34A

Synonyms

Trim34-1, Trim34

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.086) question?

Stock #

IGL02192

Quality Score

Status

Chromosome

Chromosomal Location

103893664-103911441 bp(+) (GRCm39)

Type of Mutation

start codon destroyed

DNA Base Change (assembly)

T to A at 103896939 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Lysine at position 1 (M1K)

Ref Sequence

ENSEMBL: ENSMUSP00000102462 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000060315] [ENSMUST00000106848] [ENSMUST00000106849]

AlphaFold

no structure available at present

Predicted Effect

probably null
Transcript: ENSMUST00000060315
AA Change: M1K

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000055058
Gene: ENSMUSG00000056144
AA Change: M1K

Domain	Start	End	E-Value	Type
RING	15	58	6.79e-7	SMART
BBOX	91	132	1.08e-9	SMART
coiled coil region	194	238	N/A	INTRINSIC
Blast:PRY	299	343	2e-21	BLAST
Pfam:SPRY	347	474	1e-12	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000106848
AA Change: M1K

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000102461
Gene: ENSMUSG00000056144
AA Change: M1K

Domain	Start	End	E-Value	Type
RING	15	58	6.79e-7	SMART
BBOX	91	132	1.08e-9	SMART
coiled coil region	194	238	N/A	INTRINSIC
Blast:PRY	299	343	2e-21	BLAST
Pfam:SPRY	345	484	6.5e-21	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000106849
AA Change: M1K

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000102462
Gene: ENSMUSG00000056144
AA Change: M1K

Domain	Start	End	E-Value	Type
RING	15	58	6.79e-7	SMART
BBOX	91	132	1.08e-9	SMART
coiled coil region	194	238	N/A	INTRINSIC
Blast:PRY	299	343	2e-21	BLAST
Pfam:SPRY	345	484	6.5e-21	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 60 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Actn4	A	T	7: 28,597,825 (GRCm39)	M545K	possibly damaging	Het
Adamtsl1	A	G	4: 86,146,253 (GRCm39)	E303G	probably damaging	Het
Anxa13	A	T	15: 58,220,628 (GRCm39)		noncoding transcript	Het
Ap2b1	C	T	11: 83,237,592 (GRCm39)	T552I	possibly damaging	Het
Cars1	T	C	7: 143,125,325 (GRCm39)	S388G	probably damaging	Het
Cdh18	A	T	15: 23,460,402 (GRCm39)	D544V	probably damaging	Het
Chat	T	C	14: 32,145,279 (GRCm39)	R377G	possibly damaging	Het
Col14a1	A	G	15: 55,225,798 (GRCm39)	T154A	unknown	Het
Col9a1	C	T	1: 24,261,068 (GRCm39)	P311S	probably damaging	Het
Cpsf3	G	T	12: 21,360,194 (GRCm39)		probably benign	Het
Cpsf3	G	T	12: 21,360,197 (GRCm39)		probably null	Het
Dock8	T	C	19: 25,055,569 (GRCm39)		probably null	Het
Eml6	A	G	11: 29,755,743 (GRCm39)	I837T	probably benign	Het
Epb41	T	C	4: 131,657,028 (GRCm39)	T792A	probably damaging	Het
Exph5	A	T	9: 53,287,625 (GRCm39)	R1569*	probably null	Het
F13b	A	T	1: 139,445,071 (GRCm39)	T574S	probably damaging	Het
Fam184b	G	T	5: 45,695,062 (GRCm39)	D727E	probably benign	Het
Fhip1a	A	G	3: 85,580,633 (GRCm39)	L524P	possibly damaging	Het
Fhod3	T	C	18: 25,189,415 (GRCm39)	L619P	probably damaging	Het
Fsd1l	A	G	4: 53,647,754 (GRCm39)	I66V	probably benign	Het
Fv1	A	G	4: 147,954,712 (GRCm39)	D426G	possibly damaging	Het
Gm3371	A	T	14: 44,641,235 (GRCm39)		probably benign	Het
Hnf1a	A	T	5: 115,098,177 (GRCm39)	S142T	probably damaging	Het
Itgb3	A	G	11: 104,534,765 (GRCm39)	I541V	probably benign	Het
Itgbl1	G	T	14: 124,081,338 (GRCm39)	C239F	probably damaging	Het
Krt26	C	T	11: 99,224,471 (GRCm39)	R349Q	probably benign	Het
Larp1b	G	T	3: 40,921,929 (GRCm39)	S116I	probably benign	Het
Lmtk3	A	G	7: 45,443,933 (GRCm39)		probably benign	Het
Mapk10	T	C	5: 103,137,513 (GRCm39)	I235V	probably damaging	Het
Mctp1	C	T	13: 76,879,887 (GRCm39)		probably benign	Het
Megf8	G	A	7: 25,053,285 (GRCm39)	D1819N	probably damaging	Het
Muc6	T	C	7: 141,217,717 (GRCm39)	T2254A	possibly damaging	Het
Nbr1	T	A	11: 101,460,417 (GRCm39)	S444T	probably damaging	Het
Ncor2	A	T	5: 125,101,301 (GRCm39)	D1956E	probably damaging	Het
Ndufaf5	T	C	2: 140,030,663 (GRCm39)	V183A	probably benign	Het
Nfasc	G	A	1: 132,498,219 (GRCm39)	T1155M	probably damaging	Het
Nol12	A	G	15: 78,821,374 (GRCm39)	E78G	probably damaging	Het
Npy5r	T	A	8: 67,133,998 (GRCm39)	H265L	probably benign	Het
Or10j2	T	A	1: 173,098,417 (GRCm39)	L225H	probably damaging	Het
Or8k16	G	A	2: 85,520,472 (GRCm39)	G233D	possibly damaging	Het
Pop1	A	G	15: 34,529,217 (GRCm39)	E749G	probably benign	Het
Ppil3	T	C	1: 58,477,547 (GRCm39)	I66V	probably damaging	Het
Prl4a1	C	A	13: 28,202,554 (GRCm39)	T43K	possibly damaging	Het
Prop1	A	G	11: 50,844,113 (GRCm39)		probably benign	Het
Qrsl1	A	T	10: 43,761,010 (GRCm39)	I218N	probably damaging	Het
Rbm22	T	A	18: 60,697,484 (GRCm39)	M63K	possibly damaging	Het
Rictor	T	C	15: 6,815,895 (GRCm39)	S1056P	probably benign	Het
Rps6kb2	T	C	19: 4,207,587 (GRCm39)	T388A	probably damaging	Het
Slc7a5	A	G	8: 122,613,129 (GRCm39)		probably benign	Het
Sp100	A	T	1: 85,635,722 (GRCm39)	D509V	probably damaging	Het
Spata18	G	T	5: 73,829,861 (GRCm39)		probably null	Het
Sspo	C	A	6: 48,436,502 (GRCm39)	T1254K	possibly damaging	Het
Stk19	A	G	17: 35,051,134 (GRCm39)		probably benign	Het
Taar8b	T	A	10: 23,967,262 (GRCm39)	I311F	probably damaging	Het
Themis2	C	A	4: 132,510,658 (GRCm39)		probably null	Het
Tll2	T	C	19: 41,074,702 (GRCm39)	Y937C	possibly damaging	Het
Usp50	G	A	2: 126,619,958 (GRCm39)	T118I	possibly damaging	Het
Vps13d	G	A	4: 144,875,428 (GRCm39)	S1693F	probably benign	Het
Vps16	T	A	2: 130,282,852 (GRCm39)	I467N	probably damaging	Het
Zfp318	C	T	17: 46,707,736 (GRCm39)	R265*	probably null	Het

Other mutations in Trim34a

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00503:Trim34a	APN	7	103,910,538 (GRCm39)	missense	probably damaging	1.00
IGL00826:Trim34a	APN	7	103,910,140 (GRCm39)	splice site	probably null
IGL01526:Trim34a	APN	7	103,909,706 (GRCm39)	missense	probably damaging	1.00
IGL01859:Trim34a	APN	7	103,910,149 (GRCm39)	missense	probably damaging	0.96
IGL02052:Trim34a	APN	7	103,897,038 (GRCm39)	missense	probably benign	0.33
IGL02351:Trim34a	APN	7	103,910,441 (GRCm39)	nonsense	probably null
IGL02358:Trim34a	APN	7	103,910,441 (GRCm39)	nonsense	probably null
IGL03326:Trim34a	APN	7	103,910,587 (GRCm39)	missense	probably benign	0.03
IGL03366:Trim34a	APN	7	103,910,140 (GRCm39)	splice site	probably null
Gold_belt	UTSW	7	103,910,271 (GRCm39)	nonsense	probably null
PIT4472001:Trim34a	UTSW	7	103,897,155 (GRCm39)	missense	probably damaging	1.00
PIT4791001:Trim34a	UTSW	7	103,909,691 (GRCm39)	missense	probably benign	0.15
R0115:Trim34a	UTSW	7	103,897,109 (GRCm39)	missense	probably damaging	1.00
R0848:Trim34a	UTSW	7	103,910,331 (GRCm39)	missense	probably benign
R1016:Trim34a	UTSW	7	103,897,167 (GRCm39)	missense	probably benign	0.10
R1477:Trim34a	UTSW	7	103,897,287 (GRCm39)	missense	possibly damaging	0.81
R1622:Trim34a	UTSW	7	103,910,545 (GRCm39)	splice site	probably null
R2287:Trim34a	UTSW	7	103,910,262 (GRCm39)	missense	probably damaging	1.00
R3685:Trim34a	UTSW	7	103,909,333 (GRCm39)	splice site	probably null
R4166:Trim34a	UTSW	7	103,910,223 (GRCm39)	missense	probably benign	0.02
R4967:Trim34a	UTSW	7	103,910,271 (GRCm39)	nonsense	probably null
R4979:Trim34a	UTSW	7	103,897,069 (GRCm39)	missense	probably benign	0.00
R5194:Trim34a	UTSW	7	103,910,200 (GRCm39)	missense	possibly damaging	0.70
R5443:Trim34a	UTSW	7	103,909,420 (GRCm39)	missense	possibly damaging	0.80
R5631:Trim34a	UTSW	7	103,897,946 (GRCm39)	missense	probably damaging	1.00
R5902:Trim34a	UTSW	7	103,910,328 (GRCm39)	nonsense	probably null
R6147:Trim34a	UTSW	7	103,910,398 (GRCm39)	missense	probably damaging	0.99
R6644:Trim34a	UTSW	7	103,910,244 (GRCm39)	missense	probably damaging	1.00
R7971:Trim34a	UTSW	7	103,897,025 (GRCm39)	missense	probably damaging	0.98
R8060:Trim34a	UTSW	7	103,910,183 (GRCm39)	missense	probably damaging	1.00
R8278:Trim34a	UTSW	7	103,898,623 (GRCm39)	missense	probably damaging	0.99
R8356:Trim34a	UTSW	7	103,910,178 (GRCm39)	missense	probably damaging	0.99
R9275:Trim34a	UTSW	7	103,910,201 (GRCm39)	missense	probably damaging	0.96
R9563:Trim34a	UTSW	7	103,910,328 (GRCm39)	nonsense	probably null
X0023:Trim34a	UTSW	7	103,908,622 (GRCm39)	missense	probably benign	0.43

Posted On

2015-04-16