Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02221:Atp2c2'

285151

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Atp2c2

Ensembl Gene

ENSMUSG00000034112

Gene Name

ATPase, Ca++ transporting, type 2C, member 2

Synonyms

1810010G06Rik

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL02221

Quality Score

Status

Chromosome

Chromosomal Location

120426748-120484456 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 120471073 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 407 (Y407C)

Ref Sequence

ENSEMBL: ENSMUSP00000092794 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000095171]

AlphaFold

A7L9Z8

Predicted Effect

probably damaging
Transcript: ENSMUST00000095171
AA Change: Y407C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000092794
Gene: ENSMUSG00000034112
AA Change: Y407C

Domain	Start	End	E-Value	Type
Cation_ATPase_N	54	128	1.27e-12	SMART
Pfam:E1-E2_ATPase	133	366	1.7e-62	PFAM
Pfam:Hydrolase	371	684	5.3e-18	PFAM
Pfam:HAD	374	681	7.4e-11	PFAM
Pfam:Cation_ATPase	437	521	1.1e-17	PFAM
Pfam:Cation_ATPase_C	754	927	1.1e-47	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 35 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700013D24Rik	T	C	6: 124,333,907 (GRCm39)	I24M	probably benign	Het
Ano5	G	A	7: 51,220,071 (GRCm39)	D390N	probably damaging	Het
B430306N03Rik	T	C	17: 48,631,223 (GRCm39)		probably benign	Het
Cd44	A	T	2: 102,676,858 (GRCm39)	M269K	probably benign	Het
Cdin1	T	C	2: 115,469,547 (GRCm39)		probably null	Het
Cpped1	G	T	16: 11,646,392 (GRCm39)	P144Q	probably damaging	Het
Epas1	C	T	17: 87,135,275 (GRCm39)	T636M	possibly damaging	Het
Hsd17b3	G	T	13: 64,236,865 (GRCm39)	H26Q	probably benign	Het
Ighv8-9	A	G	12: 115,431,947 (GRCm39)		probably benign	Het
Itih1	A	T	14: 30,651,544 (GRCm39)	C883S	probably damaging	Het
Krt16	A	T	11: 100,137,162 (GRCm39)		probably benign	Het
Lcn3	A	T	2: 25,656,172 (GRCm39)	M76L	probably benign	Het
Lin9	A	T	1: 180,478,399 (GRCm39)	M53L	probably benign	Het
Mast1	A	G	8: 85,645,384 (GRCm39)	V687A	possibly damaging	Het
Mmd2	C	T	5: 142,555,212 (GRCm39)		probably benign	Het
Mroh2b	T	C	15: 4,953,123 (GRCm39)	L619S	probably damaging	Het
Ngef	T	C	1: 87,468,418 (GRCm39)	T114A	probably benign	Het
Nlrp12	T	C	7: 3,289,597 (GRCm39)	D305G	possibly damaging	Het
Nlrp1a	A	T	11: 71,013,944 (GRCm39)	F435L	possibly damaging	Het
Nup188	A	G	2: 30,220,653 (GRCm39)	I909V	possibly damaging	Het
Osbpl3	A	C	6: 50,304,347 (GRCm39)		probably benign	Het
P2ry2	G	T	7: 100,647,321 (GRCm39)	P328H	possibly damaging	Het
Prex2	A	T	1: 11,131,569 (GRCm39)	N46I	probably benign	Het
Prss42	T	C	9: 110,632,243 (GRCm39)	F325L	possibly damaging	Het
Reep5	A	G	18: 34,482,850 (GRCm39)	F120L	probably damaging	Het
Scg3	G	T	9: 75,590,939 (GRCm39)	F23L	probably damaging	Het
Scx	A	G	15: 76,343,295 (GRCm39)	D200G	probably benign	Het
Setd5	C	T	6: 113,098,131 (GRCm39)		probably benign	Het
Tcf4	T	A	18: 69,480,438 (GRCm39)	S23R	probably damaging	Het
Ttc4	A	G	4: 106,533,793 (GRCm39)		probably null	Het
Tyro3	T	A	2: 119,643,071 (GRCm39)	C627S	probably benign	Het
Yipf2	T	C	9: 21,502,764 (GRCm39)	N106S	possibly damaging	Het
Zfp619	T	C	7: 39,186,334 (GRCm39)	L788P	probably benign	Het
Zfp831	G	A	2: 174,485,519 (GRCm39)	V65I	probably benign	Het
Zgpat	T	C	2: 181,020,651 (GRCm39)	S275P	probably benign	Het

Other mutations in Atp2c2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00966:Atp2c2	APN	8	120,472,329 (GRCm39)	missense	probably benign
IGL01624:Atp2c2	APN	8	120,484,189 (GRCm39)	missense	probably benign	0.00
IGL02133:Atp2c2	APN	8	120,481,074 (GRCm39)	missense	probably benign	0.00
IGL02606:Atp2c2	APN	8	120,457,013 (GRCm39)	missense	probably benign
IGL02657:Atp2c2	APN	8	120,479,771 (GRCm39)	missense	probably damaging	1.00
IGL02839:Atp2c2	APN	8	120,475,859 (GRCm39)	missense	possibly damaging	0.85
IGL03122:Atp2c2	APN	8	120,469,414 (GRCm39)	missense	possibly damaging	0.77
R0031:Atp2c2	UTSW	8	120,475,801 (GRCm39)	missense	probably benign	0.15
R0372:Atp2c2	UTSW	8	120,484,180 (GRCm39)	missense	probably benign
R0502:Atp2c2	UTSW	8	120,461,316 (GRCm39)	missense	probably null	0.99
R0503:Atp2c2	UTSW	8	120,461,316 (GRCm39)	missense	probably null	0.99
R0584:Atp2c2	UTSW	8	120,465,157 (GRCm39)	missense	probably benign	0.01
R1225:Atp2c2	UTSW	8	120,461,984 (GRCm39)	missense	probably damaging	1.00
R1580:Atp2c2	UTSW	8	120,479,726 (GRCm39)	missense	probably benign	0.00
R1620:Atp2c2	UTSW	8	120,475,865 (GRCm39)	missense	probably benign
R1638:Atp2c2	UTSW	8	120,482,742 (GRCm39)	missense	possibly damaging	0.82
R1745:Atp2c2	UTSW	8	120,451,833 (GRCm39)	missense	probably benign	0.02
R1746:Atp2c2	UTSW	8	120,461,182 (GRCm39)	unclassified	probably benign
R1907:Atp2c2	UTSW	8	120,476,615 (GRCm39)	splice site	probably benign
R2104:Atp2c2	UTSW	8	120,476,584 (GRCm39)	missense	probably benign
R2151:Atp2c2	UTSW	8	120,482,841 (GRCm39)	missense	probably benign
R2152:Atp2c2	UTSW	8	120,482,841 (GRCm39)	missense	probably benign
R2154:Atp2c2	UTSW	8	120,482,841 (GRCm39)	missense	probably benign
R2207:Atp2c2	UTSW	8	120,475,048 (GRCm39)	missense	probably damaging	1.00
R3874:Atp2c2	UTSW	8	120,462,035 (GRCm39)	missense	possibly damaging	0.74
R3912:Atp2c2	UTSW	8	120,448,015 (GRCm39)	missense	probably damaging	1.00
R4093:Atp2c2	UTSW	8	120,476,610 (GRCm39)	critical splice donor site	probably null
R4782:Atp2c2	UTSW	8	120,475,891 (GRCm39)	missense	probably damaging	0.97
R4801:Atp2c2	UTSW	8	120,474,426 (GRCm39)	missense	probably damaging	1.00
R4973:Atp2c2	UTSW	8	120,481,002 (GRCm39)	missense	probably benign	0.00
R5485:Atp2c2	UTSW	8	120,479,801 (GRCm39)	critical splice donor site	probably null
R5978:Atp2c2	UTSW	8	120,476,614 (GRCm39)	splice site	probably null
R6377:Atp2c2	UTSW	8	120,453,093 (GRCm39)	missense	probably benign	0.10
R6613:Atp2c2	UTSW	8	120,482,760 (GRCm39)	missense	probably damaging	0.99
R6765:Atp2c2	UTSW	8	120,479,756 (GRCm39)	missense	probably damaging	1.00
R6836:Atp2c2	UTSW	8	120,461,154 (GRCm39)	missense	probably damaging	1.00
R6963:Atp2c2	UTSW	8	120,457,006 (GRCm39)	nonsense	probably null
R7220:Atp2c2	UTSW	8	120,472,300 (GRCm39)	missense	probably benign	0.00
R7238:Atp2c2	UTSW	8	120,469,160 (GRCm39)	missense	possibly damaging	0.73
R7373:Atp2c2	UTSW	8	120,456,991 (GRCm39)	missense	probably benign	0.02
R7438:Atp2c2	UTSW	8	120,474,936 (GRCm39)	missense	probably damaging	1.00
R7573:Atp2c2	UTSW	8	120,478,008 (GRCm39)	missense	probably damaging	1.00
R7677:Atp2c2	UTSW	8	120,474,915 (GRCm39)	missense	probably benign	0.00
R7737:Atp2c2	UTSW	8	120,469,134 (GRCm39)	missense	probably damaging	1.00
R7912:Atp2c2	UTSW	8	120,456,917 (GRCm39)	missense	possibly damaging	0.81
R8821:Atp2c2	UTSW	8	120,476,033 (GRCm39)	splice site	probably null
R8831:Atp2c2	UTSW	8	120,476,033 (GRCm39)	splice site	probably null
R9200:Atp2c2	UTSW	8	120,474,999 (GRCm39)	nonsense	probably null
R9211:Atp2c2	UTSW	8	120,446,032 (GRCm39)	missense	probably benign
R9246:Atp2c2	UTSW	8	120,456,989 (GRCm39)	missense	probably damaging	1.00
R9285:Atp2c2	UTSW	8	120,465,141 (GRCm39)	missense	probably benign	0.00
RF004:Atp2c2	UTSW	8	120,479,561 (GRCm39)	missense	probably damaging	1.00
RF012:Atp2c2	UTSW	8	120,472,253 (GRCm39)	missense	possibly damaging	0.91
Z1177:Atp2c2	UTSW	8	120,461,124 (GRCm39)	missense	probably benign	0.00

Posted On

2015-04-16