Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02223:Gpatch11'

285218

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Gpatch11

Ensembl Gene

ENSMUSG00000050668

Gene Name

G patch domain containing 11

Synonyms

2310002B06Rik, Ccdc75

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.123) question?

Stock #

IGL02223

Quality Score

Status

Chromosome

Chromosomal Location

79142996-79155737 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 79152608 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 259 (T259A)

Ref Sequence

ENSEMBL: ENSMUSP00000126814 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000170759]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000170759
AA Change: T259A

PolyPhen 2 Score 0.232 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000126814
Gene: ENSMUSG00000050668
AA Change: T259A

Domain	Start	End	E-Value	Type
G_patch	71	117	5.8e-14	SMART
DUF4187	195	263	1.51e-25	SMART

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 51 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca17	C	T	17: 24,506,909 (GRCm39)	W1148*	probably null	Het
Adam17	A	G	12: 21,411,706 (GRCm39)	S62P	possibly damaging	Het
Akap8	T	C	17: 32,535,621 (GRCm39)	Y131C	probably damaging	Het
Ccdc169	A	G	3: 55,049,721 (GRCm39)	N48S	probably benign	Het
Ccdc80	A	G	16: 44,915,966 (GRCm39)	T241A	probably damaging	Het
Cct7	G	T	6: 85,439,023 (GRCm39)	M112I	probably benign	Het
Cftr	G	A	6: 18,221,481 (GRCm39)	A198T	probably damaging	Het
Crk	T	C	11: 75,594,205 (GRCm39)	V264A	probably damaging	Het
Dhx34	T	C	7: 15,932,584 (GRCm39)	T1071A	probably benign	Het
Dlst	A	G	12: 85,177,692 (GRCm39)	I362V	probably benign	Het
Fat2	T	C	11: 55,163,955 (GRCm39)	E3100G	probably benign	Het
Fbxo11	A	G	17: 88,316,714 (GRCm39)	V323A	probably benign	Het
Foxe3	C	A	4: 114,782,906 (GRCm39)	R102L	probably damaging	Het
Gale	T	C	4: 135,693,817 (GRCm39)	F162S	probably damaging	Het
Gipc2	G	A	3: 151,833,687 (GRCm39)	P198L	probably damaging	Het
Gm5258	A	G	1: 86,251,118 (GRCm39)		noncoding transcript	Het
H2-M10.3	T	C	17: 36,678,972 (GRCm39)	N32S	possibly damaging	Het
Hdlbp	T	C	1: 93,340,171 (GRCm39)	I999V	probably damaging	Het
Ibtk	A	G	9: 85,592,419 (GRCm39)		probably benign	Het
Ift46	A	G	9: 44,697,609 (GRCm39)	S165G	probably damaging	Het
Igsf1	A	G	X: 48,873,897 (GRCm39)	S389P	probably damaging	Het
Lrrd1	A	C	5: 3,900,211 (GRCm39)	N172T	probably benign	Het
Mamdc2	G	A	19: 23,336,507 (GRCm39)		probably benign	Het
Matn2	A	G	15: 34,423,864 (GRCm39)	N574S	probably benign	Het
Med1	T	C	11: 98,048,702 (GRCm39)	D683G	probably damaging	Het
Mon1a	A	G	9: 107,778,484 (GRCm39)	E236G	probably damaging	Het
Moxd2	T	A	6: 40,861,967 (GRCm39)	I202F	probably damaging	Het
Nif3l1	T	A	1: 58,487,202 (GRCm39)	Y129*	probably null	Het
Nlrp5	T	C	7: 23,129,447 (GRCm39)		probably benign	Het
Odad3	G	A	9: 21,904,908 (GRCm39)	R293C	probably damaging	Het
Or5k14	C	T	16: 58,693,057 (GRCm39)	G152E	probably damaging	Het
Pcx	T	C	19: 4,652,006 (GRCm39)	Y84H	probably damaging	Het
Pom121l2	T	C	13: 22,166,265 (GRCm39)	S179P	probably benign	Het
Rexo4	C	A	2: 26,845,511 (GRCm39)	C369F	probably damaging	Het
Rigi	T	C	4: 40,209,993 (GRCm39)	N692D	possibly damaging	Het
Scmh1	C	A	4: 120,372,416 (GRCm39)	H406Q	probably benign	Het
Slc12a8	A	G	16: 33,445,060 (GRCm39)	D372G	probably damaging	Het
Snip1	T	C	4: 124,966,545 (GRCm39)	F325S	possibly damaging	Het
Spr-ps1	C	T	6: 85,132,181 (GRCm39)		noncoding transcript	Het
Stk36	A	G	1: 74,662,496 (GRCm39)	Y538C	possibly damaging	Het
Svil	A	G	18: 5,105,879 (GRCm39)		probably benign	Het
Syne2	A	G	12: 76,155,079 (GRCm39)	T6787A	probably benign	Het
Tbcel	T	G	9: 42,363,014 (GRCm39)	M10L	probably benign	Het
Tesk2	T	A	4: 116,599,022 (GRCm39)	Y43*	probably null	Het
Tjp1	C	T	7: 64,972,349 (GRCm39)	R605Q	probably damaging	Het
Tmem65	A	G	15: 58,662,000 (GRCm39)		probably benign	Het
Tnnt2	A	G	1: 135,769,753 (GRCm39)		probably benign	Het
Trmt44	T	C	5: 35,731,989 (GRCm39)	E134G	probably benign	Het
Trpv2	T	C	11: 62,472,081 (GRCm39)	L91P	probably benign	Het
Ttn	G	A	2: 76,807,463 (GRCm39)	T90I	probably damaging	Het
Yy1	A	G	12: 108,759,466 (GRCm39)	E43G	unknown	Het

Other mutations in Gpatch11

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02007:Gpatch11	APN	17	79,149,593 (GRCm39)	missense	probably benign
IGL02125:Gpatch11	APN	17	79,147,538 (GRCm39)	missense	probably benign	0.21
IGL02183:Gpatch11	APN	17	79,149,660 (GRCm39)	critical splice donor site	probably null
IGL02224:Gpatch11	APN	17	79,148,522 (GRCm39)	splice site	probably benign
IGL03116:Gpatch11	APN	17	79,151,282 (GRCm39)	nonsense	probably null
FR4340:Gpatch11	UTSW	17	79,149,603 (GRCm39)	small insertion	probably benign
FR4342:Gpatch11	UTSW	17	79,149,607 (GRCm39)	small insertion	probably benign
FR4449:Gpatch11	UTSW	17	79,149,610 (GRCm39)	small insertion	probably benign
FR4449:Gpatch11	UTSW	17	79,149,605 (GRCm39)	small insertion	probably benign
FR4449:Gpatch11	UTSW	17	79,149,597 (GRCm39)	small insertion	probably benign
FR4548:Gpatch11	UTSW	17	79,149,604 (GRCm39)	small insertion	probably benign
FR4737:Gpatch11	UTSW	17	79,149,609 (GRCm39)	small insertion	probably benign
FR4737:Gpatch11	UTSW	17	79,149,600 (GRCm39)	small insertion	probably benign
FR4976:Gpatch11	UTSW	17	79,149,601 (GRCm39)	small insertion	probably benign
FR4976:Gpatch11	UTSW	17	79,149,600 (GRCm39)	small insertion	probably benign
FR4976:Gpatch11	UTSW	17	79,149,599 (GRCm39)	small insertion	probably benign
FR4976:Gpatch11	UTSW	17	79,149,609 (GRCm39)	small insertion	probably benign
FR4976:Gpatch11	UTSW	17	79,149,602 (GRCm39)	nonsense	probably null
R1670:Gpatch11	UTSW	17	79,146,529 (GRCm39)	missense	possibly damaging	0.85
R1986:Gpatch11	UTSW	17	79,151,266 (GRCm39)	missense	probably benign	0.04
R2071:Gpatch11	UTSW	17	79,148,514 (GRCm39)	critical splice donor site	probably null
R3056:Gpatch11	UTSW	17	79,151,272 (GRCm39)	missense	probably damaging	1.00
R4348:Gpatch11	UTSW	17	79,148,446 (GRCm39)	missense	probably damaging	1.00
R4352:Gpatch11	UTSW	17	79,148,446 (GRCm39)	missense	probably damaging	1.00
R5426:Gpatch11	UTSW	17	79,148,663 (GRCm39)	missense	possibly damaging	0.47
R5546:Gpatch11	UTSW	17	79,149,548 (GRCm39)	nonsense	probably null
R6681:Gpatch11	UTSW	17	79,147,528 (GRCm39)	missense	probably damaging	1.00
R7221:Gpatch11	UTSW	17	79,149,546 (GRCm39)	missense	possibly damaging	0.69
R7409:Gpatch11	UTSW	17	79,146,595 (GRCm39)	missense	probably damaging	1.00
R7662:Gpatch11	UTSW	17	79,146,484 (GRCm39)	missense	probably benign	0.44
R8906:Gpatch11	UTSW	17	79,145,289 (GRCm39)	missense	probably benign	0.17
R9265:Gpatch11	UTSW	17	79,146,547 (GRCm39)	missense	probably benign	0.11
R9277:Gpatch11	UTSW	17	79,148,446 (GRCm39)	missense	possibly damaging	0.72

Posted On

2015-04-16