Incidental Mutation 'IGL02086:Lancl2'
ID 285462
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Lancl2
Ensembl Gene ENSMUSG00000062190
Gene Name LanC (bacterial lantibiotic synthetase component C)-like 2
Synonyms 1700003F10Rik
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL02086
Quality Score
Status
Chromosome 6
Chromosomal Location 57679525-57716424 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 57711024 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Cysteine at position 394 (Y394C)
Ref Sequence ENSEMBL: ENSMUSP00000121377 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000050077] [ENSMUST00000072954] [ENSMUST00000127485] [ENSMUST00000153777]
AlphaFold Q9JJK2
Predicted Effect probably damaging
Transcript: ENSMUST00000050077
AA Change: Y403C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000052146
Gene: ENSMUSG00000062190
AA Change: Y403C

DomainStartEndE-ValueType
low complexity region 32 44 N/A INTRINSIC
LANC_like 96 444 2.51e-148 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000072954
AA Change: Y403C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000072723
Gene: ENSMUSG00000062190
AA Change: Y403C

DomainStartEndE-ValueType
low complexity region 32 44 N/A INTRINSIC
LANC_like 96 444 2.51e-148 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000127485
SMART Domains Protein: ENSMUSP00000115377
Gene: ENSMUSG00000037788

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:WBP-1 37 106 7e-8 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000153777
AA Change: Y394C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000121377
Gene: ENSMUSG00000062190
AA Change: Y394C

DomainStartEndE-ValueType
low complexity region 23 35 N/A INTRINSIC
LANC_like 87 435 2.51e-148 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 48 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930426L09Rik T C 2: 19,003,623 (GRCm39) probably benign Het
Abi3bp A G 16: 56,462,930 (GRCm39) probably benign Het
Asb4 T C 6: 5,398,386 (GRCm39) I117T probably benign Het
Birc6 T G 17: 74,946,822 (GRCm39) L2847R probably damaging Het
C2cd2 A G 16: 97,691,208 (GRCm39) probably benign Het
Ccdc77 C A 6: 120,316,119 (GRCm39) C186F possibly damaging Het
Cd300ld2 T A 11: 114,903,384 (GRCm39) probably benign Het
Cd55b A T 1: 130,345,919 (GRCm39) D166E probably benign Het
Cfap100 A G 6: 90,390,954 (GRCm39) F8L probably damaging Het
Col2a1 C T 15: 97,884,618 (GRCm39) probably null Het
Dbf4 A G 5: 8,453,189 (GRCm39) I270T probably benign Het
Dkk3 T C 7: 111,748,236 (GRCm39) S123G probably benign Het
Ep400 A G 5: 110,824,809 (GRCm39) probably benign Het
Fam184a A G 10: 53,575,351 (GRCm39) I30T probably damaging Het
Fam20a T C 11: 109,564,239 (GRCm39) I505V probably benign Het
Fbh1 T C 2: 11,768,938 (GRCm39) D285G probably benign Het
Fcho1 T C 8: 72,169,444 (GRCm39) E154G probably damaging Het
Klhdc1 A G 12: 69,329,958 (GRCm39) I362M probably benign Het
Knl1 A T 2: 118,931,255 (GRCm39) E1990D probably benign Het
Lgi2 G A 5: 52,723,299 (GRCm39) S50F probably damaging Het
Map2k7 A G 8: 4,288,950 (GRCm39) E14G probably damaging Het
Mga A G 2: 119,754,517 (GRCm39) I1009V probably damaging Het
Nat9 C A 11: 115,074,234 (GRCm39) probably null Het
Nek2 G A 1: 191,563,401 (GRCm39) A422T probably benign Het
Nfkbiz A T 16: 55,636,034 (GRCm39) L509Q probably damaging Het
Or56b2 A T 7: 104,337,634 (GRCm39) R137S probably benign Het
Pgap1 T A 1: 54,587,147 (GRCm39) Q143L probably damaging Het
Pkd1l3 C T 8: 110,392,217 (GRCm39) T1937I probably damaging Het
Pou1f1 A G 16: 65,326,784 (GRCm39) E128G probably damaging Het
Ppfia3 T C 7: 44,989,996 (GRCm39) probably benign Het
Prkd1 T C 12: 50,434,046 (GRCm39) I566V probably benign Het
Psd2 A G 18: 36,138,959 (GRCm39) R528G probably damaging Het
Ptprg G T 14: 12,110,080 (GRCm38) E263* probably null Het
Radil T C 5: 142,529,576 (GRCm39) D40G probably benign Het
Ryr2 T A 13: 11,750,442 (GRCm39) Y1943F probably damaging Het
Slc30a4 C T 2: 122,543,947 (GRCm39) probably benign Het
Slc31a1 A T 4: 62,306,241 (GRCm39) T120S possibly damaging Het
Snrpe A G 1: 133,537,487 (GRCm39) probably benign Het
Stx3 G T 19: 11,796,046 (GRCm39) probably benign Het
Thoc2l A G 5: 104,666,867 (GRCm39) E463G possibly damaging Het
Ufsp1 T A 5: 137,293,178 (GRCm39) C43S probably damaging Het
Vac14 T A 8: 111,379,950 (GRCm39) M416K possibly damaging Het
Vmn1r81 A C 7: 11,993,792 (GRCm39) V272G possibly damaging Het
Vmn2r107 T A 17: 20,578,062 (GRCm39) I457K probably benign Het
Vmn2r72 A T 7: 85,387,374 (GRCm39) V730E probably benign Het
Vmn2r9 T C 5: 108,995,433 (GRCm39) Y405C probably damaging Het
Zcchc17 T C 4: 130,210,440 (GRCm39) *242W probably null Het
Zfp503 T C 14: 22,037,354 (GRCm39) K83R possibly damaging Het
Other mutations in Lancl2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00094:Lancl2 APN 6 57,701,522 (GRCm39) splice site probably benign
IGL00469:Lancl2 APN 6 57,711,011 (GRCm39) missense probably damaging 1.00
IGL00568:Lancl2 APN 6 57,700,470 (GRCm39) splice site probably benign
IGL01527:Lancl2 APN 6 57,709,307 (GRCm39) missense probably damaging 0.99
R0309:Lancl2 UTSW 6 57,680,117 (GRCm39) missense probably damaging 1.00
R4202:Lancl2 UTSW 6 57,689,977 (GRCm39) missense probably benign 0.02
R4468:Lancl2 UTSW 6 57,690,019 (GRCm39) missense probably damaging 1.00
R4469:Lancl2 UTSW 6 57,690,019 (GRCm39) missense probably damaging 1.00
R4729:Lancl2 UTSW 6 57,714,697 (GRCm39) missense probably damaging 1.00
R4823:Lancl2 UTSW 6 57,709,262 (GRCm39) missense probably damaging 1.00
R5296:Lancl2 UTSW 6 57,701,567 (GRCm39) missense probably benign 0.05
R5615:Lancl2 UTSW 6 57,699,496 (GRCm39) missense probably damaging 1.00
R6619:Lancl2 UTSW 6 57,699,566 (GRCm39) missense probably damaging 0.98
R6784:Lancl2 UTSW 6 57,680,240 (GRCm39) missense probably benign
R6873:Lancl2 UTSW 6 57,699,642 (GRCm39) missense possibly damaging 0.86
R7363:Lancl2 UTSW 6 57,699,664 (GRCm39) missense probably benign 0.00
R8018:Lancl2 UTSW 6 57,690,078 (GRCm39) missense probably damaging 1.00
R8204:Lancl2 UTSW 6 57,714,701 (GRCm39) missense probably damaging 1.00
R9212:Lancl2 UTSW 6 57,714,673 (GRCm39) missense probably benign
R9794:Lancl2 UTSW 6 57,714,708 (GRCm39) missense probably benign 0.09
Posted On 2015-04-16