Incidental Mutation 'IGL02239:Scart2'
ID 286014
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Scart2
Ensembl Gene ENSMUSG00000054672
Gene Name scavenger receptor family member expressed on T cells 2
Synonyms 5830411N06Rik
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL02239
Quality Score
Status
Chromosome 7
Chromosomal Location 139827197-139880649 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 139875756 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Serine at position 340 (F340S)
Ref Sequence ENSEMBL: ENSMUSP00000091520 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000093984] [ENSMUST00000164583]
AlphaFold B3F5L4
Predicted Effect noncoding transcript
Transcript: ENSMUST00000059882
SMART Domains Protein: ENSMUSP00000061346
Gene: ENSMUSG00000054672

DomainStartEndE-ValueType
signal peptide 1 24 N/A INTRINSIC
SR 29 130 1.49e-18 SMART
SR 137 233 2.53e-4 SMART
SR 238 336 1.65e-34 SMART
SR 340 440 4.53e-32 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000093984
AA Change: F340S

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000091520
Gene: ENSMUSG00000054672
AA Change: F340S

DomainStartEndE-ValueType
signal peptide 1 24 N/A INTRINSIC
SR 29 130 1.49e-18 SMART
SR 137 233 2.53e-4 SMART
SR 238 336 1.65e-34 SMART
SR 340 440 4.53e-32 SMART
SR 446 546 8.78e-30 SMART
SR 551 651 1.26e-53 SMART
SR 656 756 2.88e-16 SMART
SR 783 883 7.62e-48 SMART
transmembrane domain 903 925 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000164583
AA Change: F456S

PolyPhen 2 Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000131905
Gene: ENSMUSG00000054672
AA Change: F456S

DomainStartEndE-ValueType
signal peptide 1 24 N/A INTRINSIC
SR 29 130 1.49e-18 SMART
SR 137 233 2.53e-4 SMART
Blast:SR 291 349 5e-12 BLAST
SR 354 452 1.65e-34 SMART
SR 456 556 4.53e-32 SMART
SR 562 662 8.78e-30 SMART
SR 667 767 1.26e-53 SMART
SR 772 872 2.88e-16 SMART
SR 899 999 7.62e-48 SMART
transmembrane domain 1019 1041 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000210212
Predicted Effect noncoding transcript
Transcript: ENSMUST00000211749
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 29 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcf3 A G 16: 20,369,386 (GRCm39) E262G possibly damaging Het
Adgra3 T A 5: 50,118,054 (GRCm39) S1165C probably damaging Het
Akap11 A G 14: 78,751,289 (GRCm39) L366P probably damaging Het
Astn1 T C 1: 158,491,700 (GRCm39) probably null Het
Bhmt2 C T 13: 93,799,687 (GRCm39) G250R probably benign Het
Cdc45 C T 16: 18,617,479 (GRCm39) M200I probably benign Het
Cntnap2 A G 6: 46,998,588 (GRCm39) D880G probably damaging Het
Erc1 A G 6: 119,750,852 (GRCm39) V443A probably damaging Het
Fbxw15 A G 9: 109,388,905 (GRCm39) I168T probably benign Het
Fgfr2 C T 7: 129,779,416 (GRCm39) A504T probably damaging Het
Galm A G 17: 80,452,467 (GRCm39) D135G probably damaging Het
Gstp3 C T 19: 4,107,899 (GRCm39) V145I possibly damaging Het
Hspa5 T C 2: 34,662,788 (GRCm39) F115L probably benign Het
Lig4 A C 8: 10,022,473 (GRCm39) S436A probably damaging Het
Ncam1 A G 9: 49,478,702 (GRCm39) V99A probably damaging Het
Nell1 T A 7: 49,899,398 (GRCm39) I336N probably benign Het
Or52ad1 T C 7: 102,995,805 (GRCm39) Y110C probably damaging Het
Or5p55 T C 7: 107,567,254 (GRCm39) S217P probably damaging Het
Or8g20 T A 9: 39,395,857 (GRCm39) I231F probably damaging Het
Patl1 A T 19: 11,914,723 (GRCm39) K625* probably null Het
Qrsl1 G A 10: 43,770,596 (GRCm39) P99S possibly damaging Het
Rfx8 T C 1: 39,720,046 (GRCm39) D343G probably benign Het
Serpinb3a T A 1: 106,979,418 (GRCm39) Y28F probably benign Het
Slc6a4 A T 11: 76,917,982 (GRCm39) I575F probably benign Het
Tbx5 T A 5: 120,009,345 (GRCm39) S285T possibly damaging Het
Tmem229a A T 6: 24,955,539 (GRCm39) S72T probably damaging Het
Ttn T C 2: 76,576,748 (GRCm39) D24715G probably damaging Het
Zfp784 T C 7: 5,038,670 (GRCm39) probably benign Het
Zswim2 T A 2: 83,769,107 (GRCm39) K85* probably null Het
Other mutations in Scart2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00465:Scart2 APN 7 139,874,755 (GRCm39) missense probably damaging 0.99
IGL01101:Scart2 APN 7 139,876,017 (GRCm39) missense probably benign 0.35
IGL01120:Scart2 APN 7 139,876,472 (GRCm39) missense probably benign 0.02
IGL01958:Scart2 APN 7 139,854,040 (GRCm39) missense probably damaging 1.00
IGL02150:Scart2 APN 7 139,877,772 (GRCm39) missense possibly damaging 0.84
IGL02193:Scart2 APN 7 139,828,913 (GRCm39) missense probably benign 0.17
IGL02335:Scart2 APN 7 139,876,453 (GRCm39) missense probably damaging 1.00
IGL02569:Scart2 APN 7 139,878,275 (GRCm39) missense probably benign 0.01
IGL02993:Scart2 APN 7 139,876,486 (GRCm39) missense probably benign 0.07
IGL03261:Scart2 APN 7 139,874,746 (GRCm39) missense probably benign 0.00
IGL03365:Scart2 APN 7 139,876,682 (GRCm39) missense probably damaging 1.00
IGL03399:Scart2 APN 7 139,827,869 (GRCm39) missense probably benign 0.00
IGL03052:Scart2 UTSW 7 139,828,827 (GRCm39) missense probably damaging 1.00
PIT4791001:Scart2 UTSW 7 139,853,975 (GRCm39) missense possibly damaging 0.53
R0021:Scart2 UTSW 7 139,876,310 (GRCm39) missense probably benign 0.15
R0021:Scart2 UTSW 7 139,876,310 (GRCm39) missense probably benign 0.15
R0347:Scart2 UTSW 7 139,877,767 (GRCm39) missense probably damaging 1.00
R0374:Scart2 UTSW 7 139,828,874 (GRCm39) missense probably damaging 1.00
R0639:Scart2 UTSW 7 139,827,872 (GRCm39) missense probably benign 0.01
R0667:Scart2 UTSW 7 139,841,450 (GRCm39) missense possibly damaging 0.73
R0789:Scart2 UTSW 7 139,828,133 (GRCm39) missense probably damaging 1.00
R0959:Scart2 UTSW 7 139,874,704 (GRCm39) missense probably damaging 1.00
R1316:Scart2 UTSW 7 139,879,583 (GRCm39) missense probably benign 0.09
R1764:Scart2 UTSW 7 139,877,178 (GRCm39) missense probably benign 0.00
R2247:Scart2 UTSW 7 139,829,042 (GRCm39) missense probably null 0.96
R2379:Scart2 UTSW 7 139,879,682 (GRCm39) missense probably benign 0.15
R4112:Scart2 UTSW 7 139,878,281 (GRCm39) nonsense probably null
R4114:Scart2 UTSW 7 139,877,823 (GRCm39) missense probably damaging 1.00
R4346:Scart2 UTSW 7 139,827,878 (GRCm39) missense probably damaging 0.97
R4836:Scart2 UTSW 7 139,879,021 (GRCm39) missense probably benign
R4956:Scart2 UTSW 7 139,878,275 (GRCm39) missense probably benign 0.00
R5208:Scart2 UTSW 7 139,877,949 (GRCm39) missense probably benign 0.00
R5571:Scart2 UTSW 7 139,829,036 (GRCm39) missense probably damaging 1.00
R5583:Scart2 UTSW 7 139,876,739 (GRCm39) missense probably damaging 1.00
R5645:Scart2 UTSW 7 139,828,853 (GRCm39) missense possibly damaging 0.95
R6183:Scart2 UTSW 7 139,875,947 (GRCm39) missense possibly damaging 0.82
R6995:Scart2 UTSW 7 139,841,514 (GRCm39) missense probably benign
R7436:Scart2 UTSW 7 139,841,520 (GRCm39) missense probably benign
R7621:Scart2 UTSW 7 139,876,742 (GRCm39) missense probably damaging 1.00
R7662:Scart2 UTSW 7 139,874,725 (GRCm39) missense possibly damaging 0.58
R7669:Scart2 UTSW 7 139,876,234 (GRCm39) missense possibly damaging 0.47
R7686:Scart2 UTSW 7 139,828,965 (GRCm39) missense probably benign 0.00
R7985:Scart2 UTSW 7 139,876,806 (GRCm39) missense probably damaging 1.00
R8330:Scart2 UTSW 7 139,876,231 (GRCm39) nonsense probably null
R8843:Scart2 UTSW 7 139,828,913 (GRCm39) missense possibly damaging 0.93
R8888:Scart2 UTSW 7 139,841,532 (GRCm39) missense possibly damaging 0.93
R8895:Scart2 UTSW 7 139,841,532 (GRCm39) missense possibly damaging 0.93
R9044:Scart2 UTSW 7 139,828,010 (GRCm39) missense probably damaging 1.00
R9142:Scart2 UTSW 7 139,877,806 (GRCm39) missense probably damaging 1.00
R9152:Scart2 UTSW 7 139,877,256 (GRCm39) missense possibly damaging 0.55
R9470:Scart2 UTSW 7 139,827,345 (GRCm39) missense probably benign 0.07
R9509:Scart2 UTSW 7 139,879,644 (GRCm39) nonsense probably null
R9522:Scart2 UTSW 7 139,853,987 (GRCm39) missense possibly damaging 0.73
R9755:Scart2 UTSW 7 139,841,544 (GRCm39) critical splice donor site probably null
R9794:Scart2 UTSW 7 139,874,716 (GRCm39) missense probably damaging 1.00
Posted On 2015-04-16