Incidental Mutation 'IGL02250:Emcn'
ID286367
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Emcn
Ensembl Gene ENSMUSG00000054690
Gene Nameendomucin
Synonyms0610012K22Rik
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL02250
Quality Score
Status
Chromosome3
Chromosomal Location137341067-137432185 bp(+) (GRCm38)
Type of Mutationsplice site
DNA Base Change (assembly) T to A at 137418986 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000142467 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000119475] [ENSMUST00000122064] [ENSMUST00000197511]
Predicted Effect probably benign
Transcript: ENSMUST00000119475
SMART Domains Protein: ENSMUSP00000114102
Gene: ENSMUSG00000054690

DomainStartEndE-ValueType
Pfam:Endomucin 1 248 5.2e-135 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000122064
SMART Domains Protein: ENSMUSP00000112603
Gene: ENSMUSG00000054690

DomainStartEndE-ValueType
Pfam:Endomucin 1 261 4e-112 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000128985
Predicted Effect probably benign
Transcript: ENSMUST00000197511
SMART Domains Protein: ENSMUSP00000142467
Gene: ENSMUSG00000054690

DomainStartEndE-ValueType
Pfam:Endomucin 1 92 1.3e-38 PFAM
Pfam:Endomucin 89 219 4.8e-80 PFAM
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] EMCN is a mucin-like sialoglycoprotein that interferes with the assembly of focal adhesion complexes and inhibits interaction between cells and the extracellular matrix (Kinoshita et al., 2001 [PubMed 11418125]).[supplied by OMIM, Mar 2008]
Allele List at MGI
Other mutations in this stock
Total: 40 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acp7 T A 7: 28,629,710 probably benign Het
Antxr2 A C 5: 97,977,595 probably null Het
Areg T A 5: 91,141,108 I91K possibly damaging Het
Arf1 G A 11: 59,213,167 R79C probably benign Het
Bbs2 A T 8: 94,092,426 I105N probably benign Het
Ccdc158 A T 5: 92,608,478 I1090N probably damaging Het
Ccdc90b T A 7: 92,574,615 probably benign Het
Cep57 A T 9: 13,810,643 F221I probably damaging Het
Ckap5 C T 2: 91,548,901 A62V probably damaging Het
Cntn5 G A 9: 10,145,331 R125C probably damaging Het
Csgalnact1 C A 8: 68,401,492 G219V probably damaging Het
Cxxc1 T A 18: 74,219,169 D321E probably benign Het
Ddr1 G A 17: 35,683,480 A801V probably damaging Het
Dnm1l A G 16: 16,321,686 probably benign Het
Eif2d T A 1: 131,160,429 S184T probably benign Het
Fry A T 5: 150,403,434 probably benign Het
Gas2 T A 7: 51,888,038 M37K probably damaging Het
Habp2 A G 19: 56,308,929 S100G probably benign Het
Kcnj5 A G 9: 32,317,756 C49R probably damaging Het
Lhx2 T A 2: 38,354,833 D236E probably benign Het
Megf8 T A 7: 25,342,575 S1273T probably benign Het
Mrps2 T C 2: 28,469,545 I138T possibly damaging Het
Mta1 T C 12: 113,126,798 S175P possibly damaging Het
Npat T A 9: 53,548,951 Y66* probably null Het
Nup160 A G 2: 90,708,870 R798G probably damaging Het
Olfr668 T C 7: 104,925,015 I250V probably damaging Het
Olfr921 C A 9: 38,775,554 Q100K probably damaging Het
Plxnc1 C T 10: 94,871,031 G548E probably benign Het
Radil A G 5: 142,543,774 S56P probably damaging Het
Rpgrip1l A T 8: 91,232,861 M1137K probably benign Het
Serpina1c T G 12: 103,897,228 M238L probably benign Het
Tbc1d14 A G 5: 36,571,519 S168P probably damaging Het
Tmem209 A G 6: 30,487,388 S498P probably damaging Het
Utrn A G 10: 12,436,391 Y607H probably damaging Het
Vipr1 A G 9: 121,665,189 I279V probably benign Het
Vmn2r67 T G 7: 85,155,800 N35H probably benign Het
Xirp2 C T 2: 67,514,012 T2199I probably benign Het
Zfp423 A G 8: 87,783,255 S86P probably damaging Het
Zfp831 A G 2: 174,648,201 K1254E possibly damaging Het
Zfp873 T A 10: 82,058,418 M1K probably null Het
Other mutations in Emcn
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00817:Emcn APN 3 137379877 missense probably benign 0.11
IGL03035:Emcn APN 3 137372851 critical splice donor site probably null
R0101:Emcn UTSW 3 137341240 start codon destroyed possibly damaging 0.51
R0180:Emcn UTSW 3 137418994 critical splice acceptor site probably null
R0329:Emcn UTSW 3 137416814 splice site probably benign
R0348:Emcn UTSW 3 137372847 nonsense probably null
R1475:Emcn UTSW 3 137379907 missense possibly damaging 0.92
R2224:Emcn UTSW 3 137404017 missense possibly damaging 0.93
R2226:Emcn UTSW 3 137404017 missense possibly damaging 0.93
R2227:Emcn UTSW 3 137404017 missense possibly damaging 0.93
R2471:Emcn UTSW 3 137404011 missense probably damaging 1.00
R4057:Emcn UTSW 3 137379899 missense probably damaging 0.98
R4456:Emcn UTSW 3 137379847 nonsense probably null
R4823:Emcn UTSW 3 137423426 missense probably damaging 1.00
R5043:Emcn UTSW 3 137391601 missense possibly damaging 0.95
R5326:Emcn UTSW 3 137379877 missense probably benign 0.11
R5542:Emcn UTSW 3 137379877 missense probably benign 0.11
R6925:Emcn UTSW 3 137419002 missense probably damaging 0.99
R7137:Emcn UTSW 3 137403991 missense probably damaging 0.98
R7148:Emcn UTSW 3 137417094 missense possibly damaging 0.95
R7265:Emcn UTSW 3 137417078 missense probably damaging 0.97
R7265:Emcn UTSW 3 137419076 missense probably damaging 0.99
Posted On2015-04-16