Incidental Mutation 'IGL02305:Ogfod2'
ID 287564
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Ogfod2
Ensembl Gene ENSMUSG00000023707
Gene Name 2-oxoglutarate and iron-dependent oxygenase domain containing 2
Synonyms 1300006G11Rik, 5730405M13Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.118) question?
Stock # IGL02305
Quality Score
Status
Chromosome 5
Chromosomal Location 124250384-124253544 bp(+) (GRCm39)
Type of Mutation critical splice donor site (2 bp from exon)
DNA Base Change (assembly) T to C at 124250910 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s): [ENSMUST00000024470] [ENSMUST00000031351] [ENSMUST00000119269] [ENSMUST00000122394] [ENSMUST00000198505] [ENSMUST00000196627] [ENSMUST00000198770] [ENSMUST00000145667] [ENSMUST00000196401] [ENSMUST00000149835]
AlphaFold Q9CQ04
Predicted Effect probably null
Transcript: ENSMUST00000024470
SMART Domains Protein: ENSMUSP00000024470
Gene: ENSMUSG00000023707

DomainStartEndE-ValueType
low complexity region 2 16 N/A INTRINSIC
Blast:P4Hc 42 100 2e-6 BLAST
low complexity region 102 112 N/A INTRINSIC
P4Hc 136 307 7.91e-26 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000031351
SMART Domains Protein: ENSMUSP00000031351
Gene: ENSMUSG00000029404

DomainStartEndE-ValueType
Pfam:SR-25 7 227 2.7e-104 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000119269
SMART Domains Protein: ENSMUSP00000112701
Gene: ENSMUSG00000023707

DomainStartEndE-ValueType
low complexity region 2 16 N/A INTRINSIC
Blast:P4Hc 42 133 1e-22 BLAST
Blast:P4Hc 136 175 1e-20 BLAST
low complexity region 176 187 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000122394
SMART Domains Protein: ENSMUSP00000112506
Gene: ENSMUSG00000029404

DomainStartEndE-ValueType
Pfam:SR-25 2 199 6.3e-85 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000127989
Predicted Effect noncoding transcript
Transcript: ENSMUST00000130140
Predicted Effect probably null
Transcript: ENSMUST00000198505
SMART Domains Protein: ENSMUSP00000142965
Gene: ENSMUSG00000023707

DomainStartEndE-ValueType
low complexity region 2 11 N/A INTRINSIC
low complexity region 30 45 N/A INTRINSIC
low complexity region 48 61 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000199457
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131094
Predicted Effect probably null
Transcript: ENSMUST00000196627
SMART Domains Protein: ENSMUSP00000143698
Gene: ENSMUSG00000023707

DomainStartEndE-ValueType
low complexity region 2 16 N/A INTRINSIC
Blast:P4Hc 42 133 1e-23 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000198770
SMART Domains Protein: ENSMUSP00000143318
Gene: ENSMUSG00000023707

DomainStartEndE-ValueType
Blast:P4Hc 11 102 7e-24 BLAST
Predicted Effect noncoding transcript
Transcript: ENSMUST00000143062
Predicted Effect noncoding transcript
Transcript: ENSMUST00000136955
Predicted Effect noncoding transcript
Transcript: ENSMUST00000148365
Predicted Effect probably benign
Transcript: ENSMUST00000145667
SMART Domains Protein: ENSMUSP00000122377
Gene: ENSMUSG00000029404

DomainStartEndE-ValueType
Pfam:SR-25 19 227 3e-86 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000196401
SMART Domains Protein: ENSMUSP00000142496
Gene: ENSMUSG00000029404

DomainStartEndE-ValueType
low complexity region 29 50 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000149835
SMART Domains Protein: ENSMUSP00000116269
Gene: ENSMUSG00000029404

DomainStartEndE-ValueType
low complexity region 5 32 N/A INTRINSIC
SCOP:d1l9ha_ 58 84 7e-3 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 37 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adamts16 G A 13: 70,921,048 (GRCm39) T599I probably damaging Het
Ahi1 A G 10: 20,846,796 (GRCm39) T409A probably benign Het
Apol10b T A 15: 77,469,630 (GRCm39) R182S possibly damaging Het
Arhgap35 A G 7: 16,297,590 (GRCm39) F492L probably benign Het
Ccdc136 A G 6: 29,406,173 (GRCm39) D173G probably damaging Het
Ccndbp1 T C 2: 120,841,933 (GRCm39) L67P probably damaging Het
Dync2h1 C T 9: 7,122,678 (GRCm39) V2093I probably benign Het
Eps15l1 T C 8: 73,140,853 (GRCm39) K213R probably null Het
Fat4 A T 3: 39,064,137 (GRCm39) N4698Y probably damaging Het
Frmpd1 G T 4: 45,249,209 (GRCm39) R133L probably damaging Het
Gdi2 T A 13: 3,606,428 (GRCm39) M158K probably damaging Het
Hoxc8 A G 15: 102,901,025 (GRCm39) Y156C probably damaging Het
Iho1 A T 9: 108,283,031 (GRCm39) M219K possibly damaging Het
Kcnh2 T C 5: 24,527,658 (GRCm39) D898G possibly damaging Het
Kng2 T C 16: 22,819,374 (GRCm39) probably benign Het
Men1 T C 19: 6,390,168 (GRCm39) L566P probably damaging Het
Mtmr2 T C 9: 13,706,551 (GRCm39) W153R probably damaging Het
Mug2 T G 6: 122,013,015 (GRCm39) L309R probably benign Het
Myo7a A G 7: 97,700,836 (GRCm39) *2165R probably null Het
Or8b48 C T 9: 38,492,809 (GRCm39) P79S probably damaging Het
Or8g20 A T 9: 39,396,333 (GRCm39) I72N probably damaging Het
Pard6g T C 18: 80,160,985 (GRCm39) L366P probably damaging Het
Pdlim4 A T 11: 53,946,759 (GRCm39) L117H probably damaging Het
Pkd1l1 G A 11: 8,852,467 (GRCm39) A672V probably benign Het
Pomt2 A G 12: 87,164,703 (GRCm39) probably benign Het
Prpf4 T A 4: 62,333,633 (GRCm39) probably benign Het
Rad17 C T 13: 100,770,370 (GRCm39) probably null Het
Ryr3 T A 2: 112,475,622 (GRCm39) I4499F probably damaging Het
Sav1 A G 12: 70,033,550 (GRCm39) probably benign Het
Scube1 A T 15: 83,491,591 (GRCm39) F887I probably damaging Het
Slc5a6 T C 5: 31,195,179 (GRCm39) S473G probably benign Het
Taf1b T C 12: 24,594,270 (GRCm39) S268P possibly damaging Het
Tmem135 A T 7: 88,814,331 (GRCm39) probably null Het
Vmn2r104 A T 17: 20,263,118 (GRCm39) N114K probably benign Het
Ypel5 A T 17: 73,155,591 (GRCm39) Y53F probably benign Het
Zfp438 A G 18: 5,213,674 (GRCm39) V428A possibly damaging Het
Zzef1 T C 11: 72,757,423 (GRCm39) probably benign Het
Other mutations in Ogfod2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03304:Ogfod2 APN 5 124,250,886 (GRCm39) missense probably damaging 0.99
R0018:Ogfod2 UTSW 5 124,252,588 (GRCm39) unclassified probably benign
R0681:Ogfod2 UTSW 5 124,250,907 (GRCm39) missense probably null 1.00
R0751:Ogfod2 UTSW 5 124,251,539 (GRCm39) unclassified probably benign
R1744:Ogfod2 UTSW 5 124,252,219 (GRCm39) splice site probably null
R1800:Ogfod2 UTSW 5 124,253,019 (GRCm39) missense probably damaging 1.00
R2211:Ogfod2 UTSW 5 124,250,843 (GRCm39) splice site probably null
R3977:Ogfod2 UTSW 5 124,251,272 (GRCm39) splice site probably null
R4346:Ogfod2 UTSW 5 124,251,357 (GRCm39) missense probably damaging 1.00
R4508:Ogfod2 UTSW 5 124,251,317 (GRCm39) nonsense probably null
R4537:Ogfod2 UTSW 5 124,252,591 (GRCm39) unclassified probably benign
R5795:Ogfod2 UTSW 5 124,252,824 (GRCm39) missense probably damaging 1.00
R6647:Ogfod2 UTSW 5 124,252,866 (GRCm39) missense possibly damaging 0.95
R7101:Ogfod2 UTSW 5 124,252,558 (GRCm39) missense unknown
R8001:Ogfod2 UTSW 5 124,252,946 (GRCm39) missense probably damaging 1.00
R8139:Ogfod2 UTSW 5 124,251,538 (GRCm39) missense possibly damaging 0.69
R9080:Ogfod2 UTSW 5 124,253,007 (GRCm39) missense probably damaging 0.99
R9258:Ogfod2 UTSW 5 124,250,505 (GRCm39) missense probably benign
R9619:Ogfod2 UTSW 5 124,252,470 (GRCm39) missense probably damaging 1.00
R9675:Ogfod2 UTSW 5 124,252,452 (GRCm39) missense probably damaging 1.00
Posted On 2015-04-16