Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02314:Alg2'

287950

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Alg2

Ensembl Gene

ENSMUSG00000039740

Gene Name

ALG2 alpha-1,3/1,6-mannosyltransferase

Synonyms

CDGIi, 1110018A23Rik, ALPG2, 1300013N08Rik

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

IGL02314

Quality Score

Status

Chromosome

Chromosomal Location

47469833-47474367 bp(-) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

T to A at 47472143 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Stop codon at position 94 (K94*)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000044148] [ENSMUST00000065678] [ENSMUST00000125622] [ENSMUST00000137461]

AlphaFold

Q9DBE8

Predicted Effect

probably null
Transcript: ENSMUST00000044148
AA Change: K222*

SMART Domains

Protein: ENSMUSP00000043580
Gene: ENSMUSG00000039740
AA Change: K222*

Domain	Start	End	E-Value	Type
Pfam:Glyco_transf_4	21	208	1.1e-10	PFAM
Pfam:Glyco_trans_4_4	27	189	1.3e-12	PFAM
Pfam:Glycos_transf_1	211	393	4.1e-37	PFAM
Pfam:Glyco_trans_1_4	224	379	1.9e-10	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000065678

SMART Domains

Protein: ENSMUSP00000067681
Gene: ENSMUSG00000053317

Domain	Start	End	E-Value	Type
Pfam:Sec61_beta	51	91	1.5e-23	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000125622

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000136685

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000136912

Predicted Effect

probably null
Transcript: ENSMUST00000137461

Predicted Effect

probably null
Transcript: ENSMUST00000143104
AA Change: K94*

SMART Domains

Protein: ENSMUSP00000121934
Gene: ENSMUSG00000039740
AA Change: K94*

Domain	Start	End	E-Value	Type
low complexity region	3	12	N/A	INTRINSIC
Pfam:Glycos_transf_1	84	177	6.7e-11	PFAM

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the glycosyltransferase 1 family. The encoded protein acts as an alpha 1,3 mannosyltransferase, mannosylating Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Defects in this gene have been associated with congenital disorder of glycosylation type Ih (CDG-Ii). Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2008]
PHENOTYPE: Homozygous mice die prior to genotyping age. Female heterozygous mice exhibit decreased skin fibroblast proliferation rates. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 64 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Axl	A	G	7: 25,486,345 (GRCm39)	F120L	possibly damaging	Het
Baz2b	A	G	2: 59,792,571 (GRCm39)	V519A	probably benign	Het
Cdk2	A	T	10: 128,539,595 (GRCm39)	I99N	probably damaging	Het
Ces1b	C	A	8: 93,791,524 (GRCm39)	W358C	possibly damaging	Het
Cimap1b	T	G	15: 89,262,372 (GRCm39)	K82N	probably damaging	Het
Clca3b	A	G	3: 144,533,903 (GRCm39)		probably benign	Het
Col6a4	T	G	9: 105,874,355 (GRCm39)	T2211P	probably damaging	Het
Cyp4f14	C	T	17: 33,125,265 (GRCm39)	E438K	probably benign	Het
Dpy19l4	T	A	4: 11,267,720 (GRCm39)	T407S	possibly damaging	Het
Dtx3	G	A	10: 127,026,828 (GRCm39)		probably benign	Het
Eif1ad14	T	A	12: 87,886,377 (GRCm39)	Y84F	probably benign	Het
Fat3	A	T	9: 15,881,134 (GRCm39)	L3246H	possibly damaging	Het
Fat4	A	T	3: 38,941,779 (GRCm39)	D224V	probably damaging	Het
Fndc9	A	T	11: 46,129,122 (GRCm39)	I214F	probably benign	Het
Foxred1	A	T	9: 35,117,264 (GRCm39)	I22N	probably damaging	Het
Gkn1	T	C	6: 87,326,103 (GRCm39)	D29G	probably benign	Het
Gng11	T	A	6: 4,004,317 (GRCm39)	M1K	probably null	Het
Hdac7	T	C	15: 97,706,885 (GRCm39)	D237G	probably damaging	Het
Hgf	A	G	5: 16,777,600 (GRCm39)	Y199C	probably damaging	Het
Hgfac	A	T	5: 35,198,941 (GRCm39)	M1L	probably benign	Het
Hsd17b6	T	C	10: 127,833,777 (GRCm39)	T35A	probably damaging	Het
Htr3a	G	A	9: 48,815,927 (GRCm39)	P170L	probably damaging	Het
Ighv12-3	A	G	12: 114,330,421 (GRCm39)	S25P	probably damaging	Het
Jph2	A	T	2: 163,239,273 (GRCm39)	N58K	probably damaging	Het
Lama5	A	G	2: 179,836,275 (GRCm39)		probably benign	Het
Lpin3	T	A	2: 160,740,638 (GRCm39)	Y394*	probably null	Het
Macf1	G	T	4: 123,338,630 (GRCm39)	T2248K	probably damaging	Het
Map3k2	A	G	18: 32,351,553 (GRCm39)		probably benign	Het
Map4k5	G	A	12: 69,865,213 (GRCm39)	P524S	probably benign	Het
Mcf2l	C	T	8: 13,051,851 (GRCm39)	S359L	probably damaging	Het
Mdh1b	C	T	1: 63,750,273 (GRCm39)		probably null	Het
Mfhas1	G	A	8: 36,055,927 (GRCm39)	R134H	probably damaging	Het
Mogs	A	G	6: 83,095,036 (GRCm39)	T618A	probably benign	Het
Mybpc2	T	A	7: 44,171,812 (GRCm39)	Q39H	possibly damaging	Het
Myoc	C	T	1: 162,466,917 (GRCm39)	R29W	probably damaging	Het
Nae1	A	G	8: 105,252,938 (GRCm39)	M162T	probably damaging	Het
Nfatc3	A	G	8: 106,805,532 (GRCm39)	I126V	probably benign	Het
Nxnl2	C	A	13: 51,325,565 (GRCm39)	F69L	probably benign	Het
Oca2	T	A	7: 56,006,899 (GRCm39)	I662N	probably benign	Het
Or52b3	A	T	7: 102,204,318 (GRCm39)	I276F	probably damaging	Het
Or5w8	A	G	2: 87,688,400 (GRCm39)	N294D	probably damaging	Het
Or7c70	A	T	10: 78,683,099 (GRCm39)	S217T	probably damaging	Het
Or7e176	A	T	9: 20,171,774 (GRCm39)	I213L	probably benign	Het
Pcdhb14	G	A	18: 37,583,248 (GRCm39)	E785K	probably benign	Het
Plb1	A	C	5: 32,438,492 (GRCm39)	Y209S	possibly damaging	Het
Pramel24	T	C	4: 143,455,012 (GRCm39)	S437P	probably benign	Het
Rab44	C	A	17: 29,358,327 (GRCm39)	Q172K	probably benign	Het
Rnf214	A	T	9: 45,811,105 (GRCm39)	V186E	probably benign	Het
Rps6ka1	C	A	4: 133,578,065 (GRCm39)	G522W	probably damaging	Het
Samhd1	G	T	2: 156,976,948 (GRCm39)	T21K	probably damaging	Het
Scly	A	G	1: 91,246,763 (GRCm39)	Y358C	probably benign	Het
Sfxn2	A	G	19: 46,571,026 (GRCm39)	N29D	possibly damaging	Het
Shank2	A	G	7: 143,965,008 (GRCm39)	D1451G	probably benign	Het
Slc44a5	G	A	3: 153,962,156 (GRCm39)	S363N	probably damaging	Het
Smg1	A	G	7: 117,753,932 (GRCm39)		probably benign	Het
Tas1r3	A	T	4: 155,945,119 (GRCm39)	C701S	probably damaging	Het
Tmem87a	A	G	2: 120,234,502 (GRCm39)	S14P	possibly damaging	Het
Trmt6	G	A	2: 132,647,378 (GRCm39)	A486V	probably benign	Het
Ttn	G	A	2: 76,727,091 (GRCm39)	R1602*	probably null	Het
Ush2a	A	G	1: 188,365,826 (GRCm39)	M2227V	probably benign	Het
Vmn2r96	A	T	17: 18,804,221 (GRCm39)	Q490H	probably benign	Het
Wdr19	G	T	5: 65,414,463 (GRCm39)	A1279S	probably benign	Het
Zbtb7c	G	A	18: 76,278,937 (GRCm39)	R465H	probably damaging	Het
Zfp473	T	C	7: 44,383,353 (GRCm39)	S326G	probably benign	Het

Other mutations in Alg2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00673:Alg2	APN	4	47,472,329 (GRCm39)	missense	probably damaging	0.99
IGL02321:Alg2	APN	4	47,474,249 (GRCm39)	missense	probably benign	0.01
IGL02697:Alg2	APN	4	47,471,772 (GRCm39)	missense	probably damaging	0.99
PIT4434001:Alg2	UTSW	4	47,474,076 (GRCm39)	missense	probably benign	0.13
R1265:Alg2	UTSW	4	47,474,289 (GRCm39)	unclassified	probably benign
R1861:Alg2	UTSW	4	47,471,670 (GRCm39)	missense	probably benign
R3147:Alg2	UTSW	4	47,472,259 (GRCm39)	missense	probably damaging	0.99
R3148:Alg2	UTSW	4	47,472,259 (GRCm39)	missense	probably damaging	0.99
R4828:Alg2	UTSW	4	47,471,563 (GRCm39)	missense	probably benign	0.31
R4937:Alg2	UTSW	4	47,473,974 (GRCm39)	missense	probably benign	0.01
R5529:Alg2	UTSW	4	47,472,101 (GRCm39)	missense	probably damaging	0.99
R6523:Alg2	UTSW	4	47,472,071 (GRCm39)	missense	possibly damaging	0.50
R7007:Alg2	UTSW	4	47,471,881 (GRCm39)	missense	probably benign	0.31
R7990:Alg2	UTSW	4	47,472,308 (GRCm39)	missense	probably damaging	1.00
R8361:Alg2	UTSW	4	47,471,848 (GRCm39)	missense	probably damaging	1.00
R8678:Alg2	UTSW	4	47,474,108 (GRCm39)	missense	probably damaging	1.00
R8885:Alg2	UTSW	4	47,474,159 (GRCm39)	missense	probably benign	0.00
R9248:Alg2	UTSW	4	47,474,001 (GRCm39)	missense	probably benign	0.00

Posted On

2015-04-16