Incidental Mutation 'IGL02324:Tnfrsf25'
ID |
288373 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Tnfrsf25
|
Ensembl Gene |
ENSMUSG00000024793 |
Gene Name |
tumor necrosis factor receptor superfamily, member 25 |
Synonyms |
LARD, DDR3, WSL-1, Wsl, Tnfrsf12, DR3, WSL-LR, APO-3, TR3, TRAMP |
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
IGL02324
|
Quality Score |
|
Status
|
|
Chromosome |
4 |
Chromosomal Location |
152200391-152204576 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
C to A
at 152203779 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamine to Lysine
at position 296
(Q296K)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000025706
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000025706]
[ENSMUST00000030785]
[ENSMUST00000035275]
[ENSMUST00000049305]
[ENSMUST00000070018]
[ENSMUST00000080042]
[ENSMUST00000103196]
[ENSMUST00000105661]
[ENSMUST00000105655]
[ENSMUST00000105653]
[ENSMUST00000084114]
[ENSMUST00000105654]
[ENSMUST00000105656]
[ENSMUST00000105657]
[ENSMUST00000105659]
[ENSMUST00000084115]
[ENSMUST00000105662]
[ENSMUST00000105658]
[ENSMUST00000207676]
[ENSMUST00000118648]
[ENSMUST00000135185]
|
AlphaFold |
B1AWN9 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000025706
AA Change: Q296K
PolyPhen 2
Score 0.981 (Sensitivity: 0.75; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000025706 Gene: ENSMUSG00000024793 AA Change: Q296K
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
30 |
N/A |
INTRINSIC |
TNFR
|
38 |
75 |
4.12e0 |
SMART |
TNFR
|
78 |
120 |
3.78e-5 |
SMART |
transmembrane domain
|
196 |
218 |
N/A |
INTRINSIC |
DEATH
|
315 |
407 |
6.04e-22 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000030785
|
SMART Domains |
Protein: ENSMUSP00000030785 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
ANK
|
35 |
64 |
3.26e0 |
SMART |
ANK
|
69 |
99 |
1.15e0 |
SMART |
ANK
|
103 |
133 |
2.58e-3 |
SMART |
ANK
|
137 |
167 |
1.63e0 |
SMART |
ANK
|
171 |
201 |
4.97e-5 |
SMART |
ANK
|
205 |
235 |
3.08e-1 |
SMART |
ANK
|
239 |
268 |
9.13e-4 |
SMART |
ANK
|
271 |
300 |
2.15e0 |
SMART |
ANK
|
304 |
334 |
2.08e3 |
SMART |
low complexity region
|
377 |
395 |
N/A |
INTRINSIC |
low complexity region
|
428 |
465 |
N/A |
INTRINSIC |
low complexity region
|
605 |
629 |
N/A |
INTRINSIC |
WH2
|
669 |
686 |
4.82e-3 |
SMART |
low complexity region
|
714 |
728 |
N/A |
INTRINSIC |
low complexity region
|
740 |
748 |
N/A |
INTRINSIC |
coiled coil region
|
772 |
848 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000035275
AA Change: Q272K
PolyPhen 2
Score 0.929 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000047823 Gene: ENSMUSG00000024793 AA Change: Q272K
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
43 |
N/A |
INTRINSIC |
TNFR
|
51 |
88 |
4.12e0 |
SMART |
TNFR
|
91 |
133 |
3.78e-5 |
SMART |
transmembrane domain
|
172 |
194 |
N/A |
INTRINSIC |
DEATH
|
291 |
383 |
6.04e-22 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000049305
|
SMART Domains |
Protein: ENSMUSP00000037982 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
WH2
|
26 |
43 |
4.82e-3 |
SMART |
low complexity region
|
96 |
110 |
N/A |
INTRINSIC |
low complexity region
|
122 |
130 |
N/A |
INTRINSIC |
coiled coil region
|
154 |
230 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000070018
|
SMART Domains |
Protein: ENSMUSP00000065545 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
68 |
N/A |
INTRINSIC |
low complexity region
|
101 |
138 |
N/A |
INTRINSIC |
low complexity region
|
267 |
291 |
N/A |
INTRINSIC |
low complexity region
|
304 |
313 |
N/A |
INTRINSIC |
WH2
|
322 |
339 |
4.82e-3 |
SMART |
low complexity region
|
367 |
381 |
N/A |
INTRINSIC |
low complexity region
|
393 |
401 |
N/A |
INTRINSIC |
SCOP:d1eq1a_
|
432 |
499 |
4e-5 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000080042
|
SMART Domains |
Protein: ENSMUSP00000078951 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
68 |
N/A |
INTRINSIC |
low complexity region
|
101 |
138 |
N/A |
INTRINSIC |
low complexity region
|
186 |
210 |
N/A |
INTRINSIC |
WH2
|
250 |
267 |
4.82e-3 |
SMART |
low complexity region
|
295 |
309 |
N/A |
INTRINSIC |
low complexity region
|
321 |
329 |
N/A |
INTRINSIC |
SCOP:d1eq1a_
|
360 |
427 |
2e-5 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000103196
|
SMART Domains |
Protein: ENSMUSP00000099485 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
68 |
N/A |
INTRINSIC |
low complexity region
|
98 |
135 |
N/A |
INTRINSIC |
low complexity region
|
183 |
207 |
N/A |
INTRINSIC |
low complexity region
|
220 |
229 |
N/A |
INTRINSIC |
WH2
|
238 |
255 |
4.82e-3 |
SMART |
low complexity region
|
283 |
297 |
N/A |
INTRINSIC |
low complexity region
|
309 |
317 |
N/A |
INTRINSIC |
SCOP:d1eq1a_
|
348 |
415 |
2e-5 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105661
|
SMART Domains |
Protein: ENSMUSP00000101286 Gene: ENSMUSG00000039713
Domain | Start | End | E-Value | Type |
low complexity region
|
314 |
334 |
N/A |
INTRINSIC |
low complexity region
|
369 |
380 |
N/A |
INTRINSIC |
RhoGEF
|
410 |
597 |
5.21e-53 |
SMART |
PH
|
655 |
756 |
7.35e-12 |
SMART |
low complexity region
|
778 |
790 |
N/A |
INTRINSIC |
low complexity region
|
895 |
934 |
N/A |
INTRINSIC |
low complexity region
|
1060 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105655
|
SMART Domains |
Protein: ENSMUSP00000101280 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
68 |
N/A |
INTRINSIC |
low complexity region
|
98 |
135 |
N/A |
INTRINSIC |
low complexity region
|
183 |
207 |
N/A |
INTRINSIC |
WH2
|
247 |
264 |
4.82e-3 |
SMART |
low complexity region
|
292 |
306 |
N/A |
INTRINSIC |
low complexity region
|
318 |
326 |
N/A |
INTRINSIC |
SCOP:d1eq1a_
|
357 |
424 |
3e-5 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105653
|
SMART Domains |
Protein: ENSMUSP00000101278 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
28 |
52 |
N/A |
INTRINSIC |
low complexity region
|
65 |
74 |
N/A |
INTRINSIC |
WH2
|
83 |
100 |
4.82e-3 |
SMART |
low complexity region
|
128 |
142 |
N/A |
INTRINSIC |
low complexity region
|
154 |
162 |
N/A |
INTRINSIC |
coiled coil region
|
186 |
262 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000084114
|
SMART Domains |
Protein: ENSMUSP00000081131 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
68 |
N/A |
INTRINSIC |
low complexity region
|
101 |
138 |
N/A |
INTRINSIC |
low complexity region
|
267 |
291 |
N/A |
INTRINSIC |
WH2
|
331 |
348 |
4.82e-3 |
SMART |
low complexity region
|
376 |
390 |
N/A |
INTRINSIC |
low complexity region
|
402 |
410 |
N/A |
INTRINSIC |
SCOP:d1eq1a_
|
441 |
508 |
6e-5 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105654
|
SMART Domains |
Protein: ENSMUSP00000101279 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
68 |
N/A |
INTRINSIC |
low complexity region
|
98 |
135 |
N/A |
INTRINSIC |
low complexity region
|
264 |
288 |
N/A |
INTRINSIC |
low complexity region
|
301 |
310 |
N/A |
INTRINSIC |
WH2
|
319 |
336 |
4.82e-3 |
SMART |
low complexity region
|
364 |
378 |
N/A |
INTRINSIC |
low complexity region
|
390 |
398 |
N/A |
INTRINSIC |
SCOP:d1eq1a_
|
429 |
496 |
6e-5 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105656
|
SMART Domains |
Protein: ENSMUSP00000101281 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
68 |
N/A |
INTRINSIC |
low complexity region
|
98 |
135 |
N/A |
INTRINSIC |
low complexity region
|
264 |
288 |
N/A |
INTRINSIC |
WH2
|
328 |
345 |
4.82e-3 |
SMART |
low complexity region
|
373 |
387 |
N/A |
INTRINSIC |
low complexity region
|
399 |
407 |
N/A |
INTRINSIC |
SCOP:d1eq1a_
|
438 |
505 |
8e-5 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105657
|
SMART Domains |
Protein: ENSMUSP00000101282 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
low complexity region
|
50 |
68 |
N/A |
INTRINSIC |
low complexity region
|
101 |
138 |
N/A |
INTRINSIC |
low complexity region
|
186 |
210 |
N/A |
INTRINSIC |
low complexity region
|
223 |
232 |
N/A |
INTRINSIC |
WH2
|
241 |
258 |
4.82e-3 |
SMART |
low complexity region
|
286 |
300 |
N/A |
INTRINSIC |
low complexity region
|
312 |
320 |
N/A |
INTRINSIC |
SCOP:d1eq1a_
|
351 |
418 |
2e-5 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105659
|
SMART Domains |
Protein: ENSMUSP00000101284 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
ANK
|
35 |
64 |
3.26e0 |
SMART |
ANK
|
69 |
99 |
1.15e0 |
SMART |
ANK
|
103 |
133 |
2.58e-3 |
SMART |
ANK
|
137 |
167 |
1.63e0 |
SMART |
ANK
|
171 |
201 |
4.97e-5 |
SMART |
ANK
|
205 |
235 |
3.08e-1 |
SMART |
ANK
|
239 |
268 |
9.13e-4 |
SMART |
ANK
|
271 |
300 |
2.15e0 |
SMART |
ANK
|
304 |
334 |
2.08e3 |
SMART |
low complexity region
|
377 |
395 |
N/A |
INTRINSIC |
low complexity region
|
428 |
465 |
N/A |
INTRINSIC |
low complexity region
|
624 |
648 |
N/A |
INTRINSIC |
low complexity region
|
661 |
670 |
N/A |
INTRINSIC |
WH2
|
679 |
696 |
4.82e-3 |
SMART |
low complexity region
|
724 |
738 |
N/A |
INTRINSIC |
low complexity region
|
750 |
758 |
N/A |
INTRINSIC |
coiled coil region
|
782 |
858 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000084115
|
SMART Domains |
Protein: ENSMUSP00000081132 Gene: ENSMUSG00000039713
Domain | Start | End | E-Value | Type |
low complexity region
|
314 |
334 |
N/A |
INTRINSIC |
low complexity region
|
369 |
380 |
N/A |
INTRINSIC |
RhoGEF
|
410 |
597 |
5.21e-53 |
SMART |
PH
|
655 |
756 |
7.35e-12 |
SMART |
low complexity region
|
778 |
790 |
N/A |
INTRINSIC |
low complexity region
|
895 |
934 |
N/A |
INTRINSIC |
low complexity region
|
1060 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105662
|
SMART Domains |
Protein: ENSMUSP00000101287 Gene: ENSMUSG00000039713
Domain | Start | End | E-Value | Type |
low complexity region
|
282 |
302 |
N/A |
INTRINSIC |
low complexity region
|
337 |
348 |
N/A |
INTRINSIC |
RhoGEF
|
378 |
565 |
5.21e-53 |
SMART |
PH
|
623 |
724 |
7.35e-12 |
SMART |
low complexity region
|
746 |
758 |
N/A |
INTRINSIC |
low complexity region
|
863 |
902 |
N/A |
INTRINSIC |
low complexity region
|
1028 |
1037 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000105658
|
SMART Domains |
Protein: ENSMUSP00000101283 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
ANK
|
35 |
64 |
3.26e0 |
SMART |
ANK
|
69 |
99 |
1.15e0 |
SMART |
ANK
|
103 |
133 |
2.58e-3 |
SMART |
ANK
|
137 |
167 |
1.63e0 |
SMART |
ANK
|
171 |
201 |
4.97e-5 |
SMART |
ANK
|
205 |
235 |
3.08e-1 |
SMART |
ANK
|
239 |
268 |
9.13e-4 |
SMART |
ANK
|
271 |
300 |
2.15e0 |
SMART |
ANK
|
304 |
334 |
2.08e3 |
SMART |
low complexity region
|
377 |
395 |
N/A |
INTRINSIC |
low complexity region
|
425 |
462 |
N/A |
INTRINSIC |
low complexity region
|
591 |
615 |
N/A |
INTRINSIC |
low complexity region
|
628 |
637 |
N/A |
INTRINSIC |
WH2
|
646 |
663 |
4.82e-3 |
SMART |
low complexity region
|
691 |
705 |
N/A |
INTRINSIC |
low complexity region
|
717 |
725 |
N/A |
INTRINSIC |
coiled coil region
|
749 |
825 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000153619
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000207676
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000140085
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000127111
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000150958
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000136627
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000156517
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000118648
|
SMART Domains |
Protein: ENSMUSP00000112707 Gene: ENSMUSG00000039713
Domain | Start | End | E-Value | Type |
low complexity region
|
301 |
321 |
N/A |
INTRINSIC |
low complexity region
|
356 |
367 |
N/A |
INTRINSIC |
RhoGEF
|
397 |
584 |
5.21e-53 |
SMART |
PH
|
642 |
743 |
7.35e-12 |
SMART |
low complexity region
|
765 |
777 |
N/A |
INTRINSIC |
low complexity region
|
882 |
921 |
N/A |
INTRINSIC |
low complexity region
|
1047 |
1056 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000135185
|
SMART Domains |
Protein: ENSMUSP00000122464 Gene: ENSMUSG00000028943
Domain | Start | End | E-Value | Type |
ANK
|
5 |
35 |
2.58e-3 |
SMART |
ANK
|
39 |
69 |
1.63e0 |
SMART |
ANK
|
73 |
103 |
4.97e-5 |
SMART |
ANK
|
107 |
137 |
3.08e-1 |
SMART |
ANK
|
141 |
170 |
9.13e-4 |
SMART |
ANK
|
173 |
202 |
2.15e0 |
SMART |
ANK
|
206 |
236 |
2.08e3 |
SMART |
low complexity region
|
279 |
297 |
N/A |
INTRINSIC |
low complexity region
|
330 |
367 |
N/A |
INTRINSIC |
low complexity region
|
496 |
520 |
N/A |
INTRINSIC |
low complexity region
|
533 |
542 |
N/A |
INTRINSIC |
WH2
|
551 |
568 |
4.82e-3 |
SMART |
low complexity region
|
596 |
610 |
N/A |
INTRINSIC |
low complexity region
|
622 |
630 |
N/A |
INTRINSIC |
coiled coil region
|
654 |
685 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the TNF-receptor superfamily. This receptor is expressed preferentially in the tissues enriched in lymphocytes, and it may play a role in regulating lymphocyte homeostasis. This receptor has been shown to stimulate NF-kappa B activity and regulate cell apoptosis. The signal transduction of this receptor is mediated by various death domain containing adaptor proteins. Knockout studies in mice suggested the role of this gene in the removal of self-reactive T cells in the thymus. Multiple alternatively spliced transcript variants of this gene encoding distinct isoforms have been reported, most of which are potentially secreted molecules. The alternative splicing of this gene in B and T cells encounters a programmed change upon T-cell activation, which predominantly produces full-length, membrane bound isoforms, and is thought to be involved in controlling lymphocyte proliferation induced by T-cell activation. [provided by RefSeq, Jul 2008] PHENOTYPE: Homozygous mutant mice show no developmental defects or impairments of early thymocyte development. Negative selection and anti-CD3-induced apoptosis, however, are significantly impaired. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 40 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adgrl4 |
T |
A |
3: 151,203,511 (GRCm39) |
C124S |
probably damaging |
Het |
Aldh1a7 |
T |
C |
19: 20,704,368 (GRCm39) |
N42S |
probably damaging |
Het |
Arhgef1 |
T |
C |
7: 24,623,240 (GRCm39) |
L667P |
probably damaging |
Het |
C1qb |
C |
A |
4: 136,607,811 (GRCm39) |
R184L |
possibly damaging |
Het |
Cacna1s |
A |
G |
1: 136,002,914 (GRCm39) |
|
probably benign |
Het |
Cdk20 |
A |
G |
13: 64,585,734 (GRCm39) |
E244G |
probably benign |
Het |
Copg2 |
C |
A |
6: 30,840,469 (GRCm39) |
|
probably null |
Het |
Cyp2d40 |
A |
T |
15: 82,645,149 (GRCm39) |
|
probably benign |
Het |
Cyp2j6 |
A |
G |
4: 96,414,170 (GRCm39) |
I365T |
probably damaging |
Het |
Dhx29 |
A |
G |
13: 113,064,342 (GRCm39) |
K6E |
probably damaging |
Het |
Dpp10 |
T |
A |
1: 123,295,531 (GRCm39) |
T539S |
probably benign |
Het |
Ehbp1 |
A |
T |
11: 22,046,048 (GRCm39) |
I542K |
probably damaging |
Het |
Fat1 |
A |
G |
8: 45,493,593 (GRCm39) |
Y3913C |
probably damaging |
Het |
Flt4 |
C |
T |
11: 49,536,822 (GRCm39) |
T1264I |
probably benign |
Het |
Fmnl1 |
A |
G |
11: 103,070,364 (GRCm39) |
D51G |
probably damaging |
Het |
Gm17093 |
A |
G |
14: 44,755,807 (GRCm39) |
T25A |
unknown |
Het |
Gpatch2 |
A |
G |
1: 186,957,936 (GRCm39) |
E97G |
probably damaging |
Het |
Hcn1 |
T |
C |
13: 118,039,422 (GRCm39) |
L446P |
unknown |
Het |
Hpse2 |
A |
T |
19: 42,920,038 (GRCm39) |
L354I |
probably damaging |
Het |
Hspa4 |
A |
G |
11: 53,190,885 (GRCm39) |
|
probably null |
Het |
Krtap16-1 |
C |
T |
11: 99,877,129 (GRCm39) |
V92M |
probably damaging |
Het |
Med23 |
A |
T |
10: 24,773,239 (GRCm39) |
Q281L |
probably damaging |
Het |
Megf8 |
T |
C |
7: 25,039,873 (GRCm39) |
S963P |
probably benign |
Het |
Mical1 |
G |
A |
10: 41,362,660 (GRCm39) |
E932K |
possibly damaging |
Het |
Mycbp2 |
A |
G |
14: 103,479,643 (GRCm39) |
S1217P |
probably damaging |
Het |
Myocd |
C |
A |
11: 65,069,484 (GRCm39) |
L785F |
probably benign |
Het |
Nell2 |
T |
C |
15: 95,126,982 (GRCm39) |
T798A |
probably damaging |
Het |
Nfat5 |
T |
C |
8: 108,092,808 (GRCm39) |
|
probably benign |
Het |
Olfm5 |
T |
C |
7: 103,803,302 (GRCm39) |
|
probably null |
Het |
Or1e26 |
A |
G |
11: 73,480,081 (GRCm39) |
V161A |
probably benign |
Het |
P2ry1 |
A |
T |
3: 60,911,199 (GRCm39) |
N113Y |
possibly damaging |
Het |
Pan3 |
A |
G |
5: 147,466,933 (GRCm39) |
|
probably null |
Het |
Pappa |
A |
G |
4: 65,115,045 (GRCm39) |
R714G |
probably damaging |
Het |
Plcd1 |
A |
G |
9: 118,901,710 (GRCm39) |
F579L |
probably damaging |
Het |
Ptprb |
T |
C |
10: 116,155,238 (GRCm39) |
V664A |
probably benign |
Het |
Slc27a5 |
T |
A |
7: 12,731,487 (GRCm39) |
Q168L |
probably benign |
Het |
Spag8 |
T |
C |
4: 43,651,781 (GRCm39) |
E395G |
probably damaging |
Het |
Stfa2l1 |
T |
C |
16: 35,982,138 (GRCm39) |
Y70H |
probably damaging |
Het |
Taf2 |
T |
C |
15: 54,891,772 (GRCm39) |
N1017S |
probably benign |
Het |
Trpm3 |
T |
A |
19: 22,676,143 (GRCm39) |
I103N |
probably benign |
Het |
|
Other mutations in Tnfrsf25 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01012:Tnfrsf25
|
APN |
4 |
152,202,885 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03143:Tnfrsf25
|
APN |
4 |
152,201,384 (GRCm39) |
unclassified |
probably benign |
|
hatikva
|
UTSW |
4 |
152,204,084 (GRCm39) |
splice site |
probably null |
|
R0103:Tnfrsf25
|
UTSW |
4 |
152,201,405 (GRCm39) |
missense |
possibly damaging |
0.62 |
R0103:Tnfrsf25
|
UTSW |
4 |
152,201,405 (GRCm39) |
missense |
possibly damaging |
0.62 |
R1067:Tnfrsf25
|
UTSW |
4 |
152,202,745 (GRCm39) |
missense |
probably damaging |
1.00 |
R1729:Tnfrsf25
|
UTSW |
4 |
152,202,761 (GRCm39) |
critical splice donor site |
probably null |
|
R1784:Tnfrsf25
|
UTSW |
4 |
152,202,761 (GRCm39) |
critical splice donor site |
probably null |
|
R1799:Tnfrsf25
|
UTSW |
4 |
152,201,465 (GRCm39) |
missense |
probably benign |
0.00 |
R4003:Tnfrsf25
|
UTSW |
4 |
152,204,058 (GRCm39) |
missense |
probably damaging |
0.98 |
R4151:Tnfrsf25
|
UTSW |
4 |
152,204,258 (GRCm39) |
missense |
probably damaging |
0.99 |
R4411:Tnfrsf25
|
UTSW |
4 |
152,202,843 (GRCm39) |
unclassified |
probably benign |
|
R4997:Tnfrsf25
|
UTSW |
4 |
152,202,153 (GRCm39) |
critical splice donor site |
probably null |
|
R6436:Tnfrsf25
|
UTSW |
4 |
152,204,084 (GRCm39) |
splice site |
probably null |
|
R7971:Tnfrsf25
|
UTSW |
4 |
152,204,193 (GRCm39) |
missense |
probably damaging |
1.00 |
R8164:Tnfrsf25
|
UTSW |
4 |
152,201,877 (GRCm39) |
missense |
possibly damaging |
0.91 |
R8412:Tnfrsf25
|
UTSW |
4 |
152,204,139 (GRCm39) |
missense |
possibly damaging |
0.69 |
R9089:Tnfrsf25
|
UTSW |
4 |
152,201,929 (GRCm39) |
nonsense |
probably null |
|
RF009:Tnfrsf25
|
UTSW |
4 |
152,204,081 (GRCm39) |
missense |
probably damaging |
1.00 |
X0018:Tnfrsf25
|
UTSW |
4 |
152,201,435 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Tnfrsf25
|
UTSW |
4 |
152,203,678 (GRCm39) |
missense |
probably benign |
0.19 |
Z1177:Tnfrsf25
|
UTSW |
4 |
152,202,096 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
Posted On |
2015-04-16 |