Incidental Mutation 'IGL02340:Vmn1r203'
ID |
289016 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn1r203
|
Ensembl Gene |
ENSMUSG00000069289 |
Gene Name |
vomeronasal 1 receptor 203 |
Synonyms |
V1rh11 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.080)
|
Stock # |
IGL02340
|
Quality Score |
|
Status
|
|
Chromosome |
13 |
Chromosomal Location |
22708221-22709156 bp(+) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
T to A
at 22708997 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Cysteine to Stop codon
at position 259
(C259*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154399
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000091729]
[ENSMUST00000227520]
[ENSMUST00000228889]
|
AlphaFold |
Q8R273 |
Predicted Effect |
probably null
Transcript: ENSMUST00000091729
AA Change: C259*
|
SMART Domains |
Protein: ENSMUSP00000089322 Gene: ENSMUSG00000069289 AA Change: C259*
Domain | Start | End | E-Value | Type |
transmembrane domain
|
19 |
41 |
N/A |
INTRINSIC |
Pfam:V1R
|
43 |
304 |
5.8e-35 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000137651
|
Predicted Effect |
probably null
Transcript: ENSMUST00000227520
AA Change: C259*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000228889
AA Change: C259*
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 43 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Akt2 |
T |
A |
7: 27,328,824 (GRCm39) |
I182N |
probably damaging |
Het |
Alpk3 |
A |
G |
7: 80,728,255 (GRCm39) |
T462A |
probably benign |
Het |
Amz1 |
A |
G |
5: 140,738,014 (GRCm39) |
R425G |
probably damaging |
Het |
Aoc2 |
A |
G |
11: 101,217,201 (GRCm39) |
E428G |
probably damaging |
Het |
Car4 |
C |
T |
11: 84,856,593 (GRCm39) |
P294S |
probably damaging |
Het |
Chchd6 |
A |
T |
6: 89,396,762 (GRCm39) |
H216Q |
probably damaging |
Het |
Chl1 |
A |
G |
6: 103,675,086 (GRCm39) |
Y591C |
probably damaging |
Het |
Cln8 |
T |
C |
8: 14,945,178 (GRCm39) |
L164S |
probably damaging |
Het |
Dscaml1 |
T |
C |
9: 45,581,474 (GRCm39) |
I431T |
possibly damaging |
Het |
Fam234b |
T |
C |
6: 135,208,659 (GRCm39) |
L524P |
probably damaging |
Het |
Fmo1 |
T |
C |
1: 162,660,559 (GRCm39) |
N410S |
probably benign |
Het |
Ftsj3 |
G |
A |
11: 106,143,972 (GRCm39) |
R251* |
probably null |
Het |
Greb1l |
A |
T |
18: 10,515,200 (GRCm39) |
D555V |
probably damaging |
Het |
Hcar1 |
G |
T |
5: 124,017,135 (GRCm39) |
H185Q |
probably damaging |
Het |
Kcnj12 |
G |
A |
11: 60,960,319 (GRCm39) |
V206I |
probably benign |
Het |
Lamc3 |
G |
A |
2: 31,808,469 (GRCm39) |
G742S |
probably damaging |
Het |
Lipg |
T |
C |
18: 75,093,946 (GRCm39) |
|
probably null |
Het |
Ltbp2 |
A |
G |
12: 84,839,729 (GRCm39) |
|
probably null |
Het |
Mcm3ap |
T |
G |
10: 76,332,386 (GRCm39) |
Y1234* |
probably null |
Het |
Myh6 |
T |
A |
14: 55,194,612 (GRCm39) |
D719V |
possibly damaging |
Het |
Myo9b |
A |
G |
8: 71,743,689 (GRCm39) |
N250S |
probably damaging |
Het |
Nherf1 |
A |
G |
11: 115,070,858 (GRCm39) |
E270G |
probably benign |
Het |
Notch2 |
G |
A |
3: 98,054,652 (GRCm39) |
W2438* |
probably null |
Het |
Nphp1 |
G |
A |
2: 127,621,987 (GRCm39) |
Q47* |
probably null |
Het |
Nptx2 |
T |
C |
5: 144,493,056 (GRCm39) |
L381P |
probably damaging |
Het |
Nrxn3 |
A |
G |
12: 90,171,402 (GRCm39) |
N911S |
possibly damaging |
Het |
Or10j2 |
A |
T |
1: 173,097,972 (GRCm39) |
I77F |
probably benign |
Het |
Or5d46 |
T |
C |
2: 88,169,906 (GRCm39) |
|
probably benign |
Het |
P4ha1 |
T |
A |
10: 59,188,023 (GRCm39) |
F260Y |
probably benign |
Het |
Pitpnm2 |
T |
C |
5: 124,268,676 (GRCm39) |
D504G |
probably damaging |
Het |
Prss54 |
A |
G |
8: 96,292,237 (GRCm39) |
V114A |
probably benign |
Het |
Ptprc |
G |
A |
1: 137,998,957 (GRCm39) |
T1031M |
probably damaging |
Het |
Rtf2 |
T |
C |
2: 172,310,511 (GRCm39) |
|
probably benign |
Het |
Ryr3 |
A |
G |
2: 112,777,349 (GRCm39) |
|
probably benign |
Het |
Slc14a2 |
C |
T |
18: 78,206,341 (GRCm39) |
E492K |
probably damaging |
Het |
Stab1 |
G |
T |
14: 30,862,367 (GRCm39) |
N2322K |
probably damaging |
Het |
Thsd7b |
A |
G |
1: 130,087,369 (GRCm39) |
N1162S |
probably benign |
Het |
Tmprss11b |
T |
C |
5: 86,810,090 (GRCm39) |
I297V |
probably benign |
Het |
Tnn |
T |
C |
1: 159,972,775 (GRCm39) |
N276D |
probably benign |
Het |
Trhde |
A |
T |
10: 114,428,118 (GRCm39) |
|
probably benign |
Het |
Vmn1r115 |
T |
A |
7: 20,578,453 (GRCm39) |
H153L |
possibly damaging |
Het |
Xpot |
T |
A |
10: 121,451,109 (GRCm39) |
E97V |
probably damaging |
Het |
Zbtb2 |
T |
C |
10: 4,318,712 (GRCm39) |
D438G |
probably damaging |
Het |
|
Other mutations in Vmn1r203 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01356:Vmn1r203
|
APN |
13 |
22,708,947 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01527:Vmn1r203
|
APN |
13 |
22,708,447 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL01808:Vmn1r203
|
APN |
13 |
22,708,717 (GRCm39) |
missense |
probably benign |
0.02 |
IGL01887:Vmn1r203
|
APN |
13 |
22,709,046 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02543:Vmn1r203
|
APN |
13 |
22,709,074 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02684:Vmn1r203
|
APN |
13 |
22,708,539 (GRCm39) |
missense |
possibly damaging |
0.95 |
BB005:Vmn1r203
|
UTSW |
13 |
22,708,705 (GRCm39) |
missense |
probably benign |
0.01 |
BB015:Vmn1r203
|
UTSW |
13 |
22,708,705 (GRCm39) |
missense |
probably benign |
0.01 |
PIT4519001:Vmn1r203
|
UTSW |
13 |
22,708,765 (GRCm39) |
missense |
probably benign |
0.01 |
R0544:Vmn1r203
|
UTSW |
13 |
22,708,443 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1365:Vmn1r203
|
UTSW |
13 |
22,708,756 (GRCm39) |
missense |
probably benign |
0.00 |
R1396:Vmn1r203
|
UTSW |
13 |
22,708,678 (GRCm39) |
missense |
probably benign |
0.01 |
R1794:Vmn1r203
|
UTSW |
13 |
22,708,521 (GRCm39) |
missense |
probably damaging |
1.00 |
R2010:Vmn1r203
|
UTSW |
13 |
22,708,617 (GRCm39) |
missense |
possibly damaging |
0.56 |
R2169:Vmn1r203
|
UTSW |
13 |
22,708,905 (GRCm39) |
nonsense |
probably null |
|
R2333:Vmn1r203
|
UTSW |
13 |
22,709,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R2418:Vmn1r203
|
UTSW |
13 |
22,709,004 (GRCm39) |
missense |
possibly damaging |
0.57 |
R2419:Vmn1r203
|
UTSW |
13 |
22,709,004 (GRCm39) |
missense |
possibly damaging |
0.57 |
R4322:Vmn1r203
|
UTSW |
13 |
22,708,408 (GRCm39) |
missense |
probably damaging |
1.00 |
R4460:Vmn1r203
|
UTSW |
13 |
22,708,852 (GRCm39) |
missense |
probably damaging |
0.98 |
R4686:Vmn1r203
|
UTSW |
13 |
22,708,528 (GRCm39) |
missense |
probably damaging |
1.00 |
R5526:Vmn1r203
|
UTSW |
13 |
22,708,273 (GRCm39) |
missense |
probably benign |
0.01 |
R6240:Vmn1r203
|
UTSW |
13 |
22,708,899 (GRCm39) |
missense |
possibly damaging |
0.89 |
R6607:Vmn1r203
|
UTSW |
13 |
22,708,891 (GRCm39) |
missense |
probably benign |
0.23 |
R7575:Vmn1r203
|
UTSW |
13 |
22,708,588 (GRCm39) |
missense |
probably benign |
0.12 |
R7928:Vmn1r203
|
UTSW |
13 |
22,708,705 (GRCm39) |
missense |
probably benign |
0.01 |
R8375:Vmn1r203
|
UTSW |
13 |
22,709,154 (GRCm39) |
makesense |
probably null |
|
R8421:Vmn1r203
|
UTSW |
13 |
22,709,154 (GRCm39) |
makesense |
probably null |
|
R8424:Vmn1r203
|
UTSW |
13 |
22,709,004 (GRCm39) |
missense |
probably damaging |
1.00 |
R8845:Vmn1r203
|
UTSW |
13 |
22,708,720 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8933:Vmn1r203
|
UTSW |
13 |
22,708,691 (GRCm39) |
missense |
possibly damaging |
0.69 |
R8956:Vmn1r203
|
UTSW |
13 |
22,709,004 (GRCm39) |
missense |
possibly damaging |
0.57 |
R9493:Vmn1r203
|
UTSW |
13 |
22,708,423 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Vmn1r203
|
UTSW |
13 |
22,708,579 (GRCm39) |
missense |
probably damaging |
0.97 |
|
Posted On |
2015-04-16 |