Incidental Mutation 'IGL02298:Clec2m'
ID 290228
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Clec2m
Ensembl Gene ENSMUSG00000047720
Gene Name C-type lectin domain family 2, member m
Synonyms 4922502D21Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.054) question?
Stock # IGL02298
Quality Score
Status
Chromosome 6
Chromosomal Location 129299127-129308759 bp(-) (GRCm39)
Type of Mutation start codon destroyed
DNA Base Change (assembly) T to A at 129308527 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Methionine to Leucine at position 1 (M1L)
Ref Sequence ENSEMBL: ENSMUSP00000062024 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000051283]
AlphaFold Q8C634
Predicted Effect probably benign
Transcript: ENSMUST00000051283
AA Change: M1L

PolyPhen 2 Score 0.090 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000062024
Gene: ENSMUSG00000047720
AA Change: M1L

DomainStartEndE-ValueType
low complexity region 31 44 N/A INTRINSIC
CLECT 71 183 1.32e-19 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000203159
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 15 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ahctf1 A G 1: 179,580,044 (GRCm39) S2053P probably benign Het
Alkbh2 C T 5: 114,263,633 (GRCm39) E125K probably benign Het
Cd226 A T 18: 89,225,175 (GRCm39) D24V probably damaging Het
Dync1h1 G A 12: 110,607,322 (GRCm39) E2638K probably damaging Het
Fbxw5 G A 2: 25,394,456 (GRCm39) W143* probably null Het
Galk2 T C 2: 125,701,290 (GRCm39) S5P probably benign Het
Gtf2h2 A G 13: 100,617,547 (GRCm39) V205A probably damaging Het
Helb C A 10: 119,937,431 (GRCm39) Q604H probably damaging Het
Ifih1 A G 2: 62,440,783 (GRCm39) probably null Het
Map7d1 T C 4: 126,127,714 (GRCm39) E675G unknown Het
Or8b48 C T 9: 38,492,809 (GRCm39) P79S probably damaging Het
Shc4 T C 2: 125,491,074 (GRCm39) H488R probably damaging Het
Speer1d T G 5: 11,307,158 (GRCm39) L12R probably damaging Het
Zfhx4 G A 3: 5,309,364 (GRCm39) probably null Het
Zfp451 A T 1: 33,812,002 (GRCm39) N904K probably damaging Het
Other mutations in Clec2m
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02053:Clec2m APN 6 129,303,725 (GRCm39) missense probably benign 0.00
IGL03350:Clec2m APN 6 129,307,986 (GRCm39) missense probably benign 0.07
R0178:Clec2m UTSW 6 129,303,786 (GRCm39) missense probably benign 0.01
R0270:Clec2m UTSW 6 129,302,571 (GRCm39) nonsense probably null
R0414:Clec2m UTSW 6 129,303,813 (GRCm39) unclassified probably benign
R0648:Clec2m UTSW 6 129,307,932 (GRCm39) missense probably benign 0.03
R1065:Clec2m UTSW 6 129,300,013 (GRCm39) missense possibly damaging 0.83
R2075:Clec2m UTSW 6 129,303,666 (GRCm39) missense probably benign 0.01
R6163:Clec2m UTSW 6 129,303,710 (GRCm39) missense probably benign 0.00
R7092:Clec2m UTSW 6 129,299,963 (GRCm39) missense probably benign 0.12
R7107:Clec2m UTSW 6 129,299,915 (GRCm39) missense probably damaging 1.00
R7360:Clec2m UTSW 6 129,303,710 (GRCm39) missense probably benign 0.00
R7369:Clec2m UTSW 6 129,308,496 (GRCm39) missense possibly damaging 0.68
R7414:Clec2m UTSW 6 129,302,596 (GRCm39) missense probably benign 0.17
R7937:Clec2m UTSW 6 129,307,974 (GRCm39) missense possibly damaging 0.84
R8345:Clec2m UTSW 6 129,302,593 (GRCm39) missense probably damaging 1.00
R8402:Clec2m UTSW 6 129,300,007 (GRCm39) missense possibly damaging 0.94
R8814:Clec2m UTSW 6 129,302,567 (GRCm39) intron probably benign
R8862:Clec2m UTSW 6 129,308,494 (GRCm39) missense probably benign 0.00
X0026:Clec2m UTSW 6 129,303,656 (GRCm39) missense probably benign 0.03
Posted On 2015-04-16