Incidental Mutation 'IGL02362:Sik2'
ID290531
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Sik2
Ensembl Gene ENSMUSG00000037112
Gene Namesalt inducible kinase 2
SynonymsSnf1lk2
Accession Numbers
Is this an essential gene? Possibly essential (E-score: 0.688) question?
Stock #IGL02362
Quality Score
Status
Chromosome9
Chromosomal Location50892801-51009073 bp(-) (GRCm38)
Type of Mutationnonsense
DNA Base Change (assembly) C to T at 50917603 bp
ZygosityHeterozygous
Amino Acid Change Tryptophan to Stop codon at position 176 (W176*)
Ref Sequence ENSEMBL: ENSMUSP00000134936 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000041375] [ENSMUST00000176491] [ENSMUST00000176663] [ENSMUST00000176824]
Predicted Effect probably null
Transcript: ENSMUST00000041375
AA Change: W176*
SMART Domains Protein: ENSMUSP00000038761
Gene: ENSMUSG00000037112
AA Change: W176*

DomainStartEndE-ValueType
S_TKc 20 271 4.63e-101 SMART
low complexity region 454 464 N/A INTRINSIC
low complexity region 643 664 N/A INTRINSIC
low complexity region 708 731 N/A INTRINSIC
low complexity region 800 842 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000176491
AA Change: W176*
SMART Domains Protein: ENSMUSP00000134954
Gene: ENSMUSG00000037112
AA Change: W176*

DomainStartEndE-ValueType
S_TKc 20 271 4.63e-101 SMART
low complexity region 454 464 N/A INTRINSIC
low complexity region 643 664 N/A INTRINSIC
low complexity region 708 731 N/A INTRINSIC
low complexity region 800 842 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000176663
AA Change: W176*
SMART Domains Protein: ENSMUSP00000135376
Gene: ENSMUSG00000037112
AA Change: W176*

DomainStartEndE-ValueType
S_TKc 20 271 4.63e-101 SMART
low complexity region 454 464 N/A INTRINSIC
low complexity region 643 664 N/A INTRINSIC
low complexity region 708 731 N/A INTRINSIC
low complexity region 800 842 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000176824
AA Change: W176*
SMART Domains Protein: ENSMUSP00000134936
Gene: ENSMUSG00000037112
AA Change: W176*

DomainStartEndE-ValueType
S_TKc 20 271 4.63e-101 SMART
low complexity region 454 464 N/A INTRINSIC
low complexity region 643 664 N/A INTRINSIC
low complexity region 708 731 N/A INTRINSIC
low complexity region 800 842 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice heterozygous for a knock-out allele exhibit darkened hair color in an agouti background. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930430A15Rik T C 2: 111,211,651 probably benign Het
Adam3 C A 8: 24,697,191 C428F probably damaging Het
Alas1 T C 9: 106,236,639 Y469C probably damaging Het
Asxl1 C T 2: 153,401,786 L1419F probably benign Het
Bcan C T 3: 87,994,142 D418N possibly damaging Het
Cdc42bpg A G 19: 6,310,809 D199G possibly damaging Het
Chst15 T C 7: 132,266,672 N340D probably benign Het
Col12a1 T G 9: 79,630,711 probably benign Het
Cyp2c67 T A 19: 39,643,405 H116L probably benign Het
Cyp2c67 G A 19: 39,617,382 R357* probably null Het
Ears2 T C 7: 122,044,550 D395G probably benign Het
Fam227a A T 15: 79,643,938 probably benign Het
Fap A G 2: 62,573,498 V11A probably benign Het
Ganc A G 2: 120,433,757 D397G probably damaging Het
Gjb6 C A 14: 57,124,295 G170C possibly damaging Het
Gm13023 A G 4: 143,793,010 S114G probably damaging Het
Gm8989 T C 7: 106,330,273 noncoding transcript Het
Gria2 A T 3: 80,706,937 W599R probably damaging Het
Ighv1-64 A G 12: 115,507,616 S94P probably benign Het
Kifc3 C T 8: 95,109,879 A85T probably damaging Het
Lifr G A 15: 7,164,693 probably null Het
Lonp2 T G 8: 86,624,246 S21R probably benign Het
Nxpe3 A G 16: 55,890,586 V30A probably benign Het
Olfml1 T C 7: 107,567,803 V13A probably benign Het
Olfr1490 T C 19: 13,655,233 V268A probably benign Het
Olfr366 A G 2: 37,219,669 Y60C probably damaging Het
Pcnt G A 10: 76,375,162 Q2376* probably null Het
Pglyrp2 A G 17: 32,417,022 L380P probably damaging Het
Plin3 A G 17: 56,286,636 V26A probably benign Het
Rims1 A G 1: 22,483,207 I470T probably damaging Het
Rora T C 9: 69,374,092 Y329H probably damaging Het
Scnn1b G A 7: 121,917,547 R503H probably damaging Het
Sec14l1 A G 11: 117,144,849 D237G possibly damaging Het
Selplg A G 5: 113,819,406 S280P probably benign Het
Serpina12 A G 12: 104,037,881 L164P probably benign Het
Slc2a1 T C 4: 119,136,415 F483S possibly damaging Het
Speg A G 1: 75,423,915 D2573G possibly damaging Het
Stil C T 4: 115,010,111 S239L probably damaging Het
Tmem94 C A 11: 115,794,745 S941R probably damaging Het
Tnfrsf11b T A 15: 54,252,382 D273V probably damaging Het
Tns2 A G 15: 102,112,290 T864A probably benign Het
Zfpm2 A G 15: 41,099,494 H184R probably damaging Het
Other mutations in Sik2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01366:Sik2 APN 9 50907463 missense probably damaging 0.96
IGL01552:Sik2 APN 9 50917522 splice site probably benign
IGL02175:Sik2 APN 9 50895609 nonsense probably null
IGL02355:Sik2 APN 9 50917603 nonsense probably null
IGL03197:Sik2 APN 9 50895773 missense probably damaging 1.00
R0066:Sik2 UTSW 9 50998533 missense probably benign 0.18
R0066:Sik2 UTSW 9 50998533 missense probably benign 0.18
R0109:Sik2 UTSW 9 50899475 missense possibly damaging 0.50
R0109:Sik2 UTSW 9 50899475 missense possibly damaging 0.50
R0416:Sik2 UTSW 9 50995632 missense probably damaging 1.00
R0648:Sik2 UTSW 9 50898745 missense probably benign 0.26
R0714:Sik2 UTSW 9 50907436 missense probably benign 0.13
R1472:Sik2 UTSW 9 51008811 missense probably damaging 1.00
R1592:Sik2 UTSW 9 50995671 missense probably damaging 1.00
R1899:Sik2 UTSW 9 50995674 splice site probably benign
R2032:Sik2 UTSW 9 50995647 missense probably damaging 1.00
R2079:Sik2 UTSW 9 50907406 critical splice donor site probably null
R2853:Sik2 UTSW 9 50898297 missense probably damaging 1.00
R4085:Sik2 UTSW 9 50935385 intron probably benign
R4567:Sik2 UTSW 9 50998576 missense probably damaging 1.00
R5098:Sik2 UTSW 9 50995591 intron probably benign
R5176:Sik2 UTSW 9 50899403 missense probably benign 0.02
R5640:Sik2 UTSW 9 50915506 missense possibly damaging 0.93
R5682:Sik2 UTSW 9 50917082 missense probably damaging 1.00
R5779:Sik2 UTSW 9 50895845 missense probably benign
R5935:Sik2 UTSW 9 50917131 missense probably damaging 1.00
R5997:Sik2 UTSW 9 50895342 critical splice donor site probably null
R6664:Sik2 UTSW 9 50935457 missense probably damaging 1.00
R6787:Sik2 UTSW 9 50998534 missense possibly damaging 0.67
R6980:Sik2 UTSW 9 50897455 missense probably benign 0.00
R7057:Sik2 UTSW 9 50998561 missense probably damaging 1.00
R7064:Sik2 UTSW 9 50907420 missense probably damaging 0.99
R7165:Sik2 UTSW 9 50917097 missense probably damaging 1.00
R7892:Sik2 UTSW 9 51008832 missense probably damaging 0.98
R8252:Sik2 UTSW 9 50917115 missense possibly damaging 0.89
Posted On2015-04-16