Incidental Mutation 'IGL02397:Vmn1r71'
ID 291721
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r71
Ensembl Gene ENSMUSG00000059206
Gene Name vomeronasal 1 receptor 71
Synonyms V1re13
Accession Numbers
Essential gene? Probably non essential (E-score: 0.050) question?
Stock # IGL02397
Quality Score
Status
Chromosome 7
Chromosomal Location 10481429-10483465 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 10482199 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Glutamine at position 163 (R163Q)
Ref Sequence ENSEMBL: ENSMUSP00000154779 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000079113] [ENSMUST00000226874] [ENSMUST00000227003] [ENSMUST00000227702] [ENSMUST00000227940] [ENSMUST00000228526] [ENSMUST00000228098] [ENSMUST00000228248] [ENSMUST00000228374] [ENSMUST00000228561]
AlphaFold Q8VIC0
Predicted Effect probably benign
Transcript: ENSMUST00000079113
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000078116
Gene: ENSMUSG00000059206
AA Change: R163Q

DomainStartEndE-ValueType
Pfam:TAS2R 3 304 2e-8 PFAM
Pfam:7tm_1 22 289 3.1e-6 PFAM
Pfam:V1R 34 297 4.8e-28 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000210233
Predicted Effect probably benign
Transcript: ENSMUST00000226874
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
Predicted Effect probably benign
Transcript: ENSMUST00000227003
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
Predicted Effect probably benign
Transcript: ENSMUST00000227702
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
Predicted Effect probably benign
Transcript: ENSMUST00000227940
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
Predicted Effect probably benign
Transcript: ENSMUST00000228526
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
Predicted Effect probably benign
Transcript: ENSMUST00000228098
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
Predicted Effect probably benign
Transcript: ENSMUST00000228248
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
Predicted Effect probably benign
Transcript: ENSMUST00000228374
AA Change: R163Q

PolyPhen 2 Score 0.266 (Sensitivity: 0.91; Specificity: 0.88)
Predicted Effect probably benign
Transcript: ENSMUST00000228561
AA Change: R97Q

PolyPhen 2 Score 0.225 (Sensitivity: 0.91; Specificity: 0.88)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 35 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A2m A G 6: 121,623,834 (GRCm39) N400S probably benign Het
Adam12 T A 7: 133,511,548 (GRCm39) probably benign Het
Adam5 T C 8: 25,234,149 (GRCm39) probably benign Het
Amn A T 12: 111,240,913 (GRCm39) Y139F possibly damaging Het
Ano10 C A 9: 122,090,458 (GRCm39) R285L probably damaging Het
Atad2b A G 12: 5,024,046 (GRCm39) Y57C probably damaging Het
Brd8 T C 18: 34,737,926 (GRCm39) K786R probably damaging Het
Cacna2d1 T C 5: 16,525,162 (GRCm39) probably benign Het
Card9 C T 2: 26,242,341 (GRCm39) D532N probably damaging Het
Cd22 T C 7: 30,577,050 (GRCm39) T86A probably benign Het
Cebpz A T 17: 79,230,690 (GRCm39) D842E possibly damaging Het
Csgalnact1 C A 8: 68,854,144 (GRCm39) G219V probably damaging Het
Cspp1 A G 1: 10,178,690 (GRCm39) N713S possibly damaging Het
Eml5 T C 12: 98,756,933 (GRCm39) T1899A probably benign Het
Fpgs T C 2: 32,575,801 (GRCm39) T381A probably damaging Het
Frmd7 G A X: 49,984,775 (GRCm39) T465I possibly damaging Het
Gm9837 A T 11: 53,360,987 (GRCm39) probably benign Het
Hectd3 C A 4: 116,860,333 (GRCm39) A816D possibly damaging Het
Itpripl2 A G 7: 118,089,519 (GRCm39) W347R probably damaging Het
Kcnc3 A G 7: 44,245,218 (GRCm39) T503A probably damaging Het
Mmadhc T C 2: 50,178,992 (GRCm39) E142G possibly damaging Het
Nabp2 T A 10: 128,244,192 (GRCm39) N138I possibly damaging Het
Obscn A G 11: 58,967,725 (GRCm39) V2902A possibly damaging Het
Rbm8a2 T C 1: 175,806,204 (GRCm39) D91G probably damaging Het
Samd3 A T 10: 26,109,474 (GRCm39) Y134F possibly damaging Het
Slc11a2 A G 15: 100,299,530 (GRCm39) F58S probably damaging Het
Slitrk4 T C X: 63,316,290 (GRCm39) T126A probably damaging Het
Sspo C A 6: 48,438,572 (GRCm39) P1547T probably benign Het
Tecta T C 9: 42,306,294 (GRCm39) S45G probably damaging Het
Tenm3 T C 8: 48,689,729 (GRCm39) T1937A possibly damaging Het
Tmem214 G A 5: 31,030,090 (GRCm39) A296T probably benign Het
Trmt1l T A 1: 151,315,282 (GRCm39) I156N probably damaging Het
Ythdf2 C T 4: 131,938,757 (GRCm39) G13D probably damaging Het
Zbtb7c A T 18: 76,270,047 (GRCm39) Y45F possibly damaging Het
Zfc3h1 G A 10: 115,243,890 (GRCm39) M740I probably damaging Het
Other mutations in Vmn1r71
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00984:Vmn1r71 APN 7 10,482,046 (GRCm39) missense probably damaging 0.99
IGL01921:Vmn1r71 APN 7 10,482,199 (GRCm39) missense probably benign 0.16
IGL02654:Vmn1r71 APN 7 10,482,242 (GRCm39) missense probably benign 0.42
IGL02900:Vmn1r71 APN 7 10,482,601 (GRCm39) missense probably benign 0.28
IGL03236:Vmn1r71 APN 7 10,482,211 (GRCm39) missense probably benign 0.11
IGL03269:Vmn1r71 APN 7 10,482,571 (GRCm39) missense possibly damaging 0.88
FR4976:Vmn1r71 UTSW 7 10,482,048 (GRCm39) missense probably benign
R0389:Vmn1r71 UTSW 7 10,482,238 (GRCm39) missense probably benign 0.05
R0443:Vmn1r71 UTSW 7 10,482,238 (GRCm39) missense probably benign 0.05
R0470:Vmn1r71 UTSW 7 10,482,019 (GRCm39) missense possibly damaging 0.64
R0471:Vmn1r71 UTSW 7 10,482,019 (GRCm39) missense possibly damaging 0.64
R0472:Vmn1r71 UTSW 7 10,482,019 (GRCm39) missense possibly damaging 0.64
R0567:Vmn1r71 UTSW 7 10,482,556 (GRCm39) missense probably damaging 1.00
R1498:Vmn1r71 UTSW 7 10,482,575 (GRCm39) missense probably benign 0.01
R1745:Vmn1r71 UTSW 7 10,482,196 (GRCm39) missense probably benign 0.05
R2350:Vmn1r71 UTSW 7 10,481,846 (GRCm39) missense probably benign 0.00
R2970:Vmn1r71 UTSW 7 10,482,641 (GRCm39) missense possibly damaging 0.67
R3522:Vmn1r71 UTSW 7 10,481,792 (GRCm39) missense probably benign 0.03
R4193:Vmn1r71 UTSW 7 10,482,175 (GRCm39) missense possibly damaging 0.55
R4736:Vmn1r71 UTSW 7 10,481,791 (GRCm39) missense possibly damaging 0.94
R5115:Vmn1r71 UTSW 7 10,481,885 (GRCm39) missense probably benign 0.00
R6108:Vmn1r71 UTSW 7 10,482,545 (GRCm39) missense probably benign 0.01
R6455:Vmn1r71 UTSW 7 10,482,331 (GRCm39) missense probably benign 0.01
R6582:Vmn1r71 UTSW 7 10,482,608 (GRCm39) missense probably benign 0.00
R6696:Vmn1r71 UTSW 7 10,482,401 (GRCm39) missense probably damaging 0.96
R6778:Vmn1r71 UTSW 7 10,482,143 (GRCm39) missense probably benign 0.02
R7347:Vmn1r71 UTSW 7 10,482,428 (GRCm39) missense not run
R7631:Vmn1r71 UTSW 7 10,482,378 (GRCm39) missense probably damaging 1.00
R7795:Vmn1r71 UTSW 7 10,482,136 (GRCm39) missense probably damaging 0.98
R7820:Vmn1r71 UTSW 7 10,482,652 (GRCm39) missense possibly damaging 0.85
R7836:Vmn1r71 UTSW 7 10,482,277 (GRCm39) missense possibly damaging 0.51
Posted On 2015-04-16