Incidental Mutation 'IGL02407:Or4k39'
ID 292106
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Or4k39
Ensembl Gene ENSMUSG00000062280
Gene Name olfactory receptor family 4 subfamily K member 39, pseudogene 1
Synonyms GA_x6K02T2Q125-72459956-72460837, MOR248-25_p, MOR248-17P, Olfr1285
Accession Numbers
Essential gene? Probably non essential (E-score: 0.078) question?
Stock # IGL02407
Quality Score
Status
Chromosome 2
Chromosomal Location 111238802-111239643 bp(+) (GRCm39)
Type of Mutation exon
DNA Base Change (assembly) T to A at 111238923 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s):
AlphaFold no structure available at present
Predicted Effect noncoding transcript
Transcript: ENSMUST00000208523
Predicted Effect noncoding transcript
Transcript: ENSMUST00000220153
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 60 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A2m G A 6: 121,645,575 (GRCm39) W1040* probably null Het
Adgrv1 C A 13: 81,627,789 (GRCm39) A3691S probably damaging Het
Als2cl T A 9: 110,718,295 (GRCm39) Y345* probably null Het
Aplp2 A T 9: 31,069,823 (GRCm39) Y496* probably null Het
Ash1l T C 3: 88,979,855 (GRCm39) V2793A probably damaging Het
Bfsp1 A T 2: 143,668,853 (GRCm39) D575E probably benign Het
Ceacam20 G T 7: 19,704,332 (GRCm39) V128F probably benign Het
Cers4 A T 8: 4,570,306 (GRCm39) K204* probably null Het
Cog1 T C 11: 113,544,852 (GRCm39) Y345H probably benign Het
Col14a1 T C 15: 55,312,272 (GRCm39) probably benign Het
Col19a1 A T 1: 24,351,453 (GRCm39) probably null Het
Ctnnd2 T A 15: 30,966,914 (GRCm39) M955K probably damaging Het
Cyp3a16 A T 5: 145,388,652 (GRCm39) M275K probably damaging Het
Degs2 T G 12: 108,658,254 (GRCm39) T242P probably damaging Het
Elac2 T C 11: 64,890,001 (GRCm39) V612A probably benign Het
Elovl6 T A 3: 129,398,733 (GRCm39) F45I probably damaging Het
Exoc1 A C 5: 76,693,193 (GRCm39) N360H probably damaging Het
Fam221b A T 4: 43,666,309 (GRCm39) S101T possibly damaging Het
Garre1 A T 7: 33,955,909 (GRCm39) N393K probably damaging Het
Glyr1 A G 16: 4,854,812 (GRCm39) F89L probably benign Het
Herc4 C A 10: 63,142,203 (GRCm39) T668K probably damaging Het
Hibadh C T 6: 52,525,874 (GRCm39) V259I possibly damaging Het
Hp1bp3 T A 4: 137,967,983 (GRCm39) D397E probably damaging Het
Ift80 G T 3: 68,805,869 (GRCm39) D724E probably benign Het
Igkv3-10 T C 6: 70,550,223 (GRCm39) probably benign Het
Irf9 G T 14: 55,842,678 (GRCm39) A75S possibly damaging Het
Kif13a C T 13: 46,938,769 (GRCm39) V76M probably damaging Het
Krt4 T C 15: 101,829,740 (GRCm39) I263V probably benign Het
Lgals8 A G 13: 12,469,699 (GRCm39) W87R probably benign Het
Mccc2 G A 13: 100,127,816 (GRCm39) P96L probably damaging Het
Megf11 A C 9: 64,587,531 (GRCm39) D443A probably damaging Het
Nckap5l T C 15: 99,321,008 (GRCm39) probably benign Het
Ndor1 A G 2: 25,139,281 (GRCm39) V230A probably benign Het
Nif3l1 G T 1: 58,496,956 (GRCm39) V294L possibly damaging Het
Pcdhb13 T A 18: 37,576,128 (GRCm39) Y169N probably damaging Het
Peg3 A G 7: 6,710,635 (GRCm39) I1529T probably damaging Het
Piezo2 T A 18: 63,279,915 (GRCm39) I219F probably damaging Het
Prpf38a G A 4: 108,424,836 (GRCm39) R242W unknown Het
Prrc2a A T 17: 35,379,480 (GRCm39) D255E unknown Het
Rapgef6 G T 11: 54,567,181 (GRCm39) D1121Y possibly damaging Het
Ryr3 T A 2: 112,585,303 (GRCm39) H2761L probably damaging Het
Sel1l A T 12: 91,810,042 (GRCm39) probably benign Het
Slc30a9 A G 5: 67,510,065 (GRCm39) D539G probably damaging Het
Slc38a9 A G 13: 112,826,777 (GRCm39) S172G probably benign Het
Slfn2 C A 11: 82,960,402 (GRCm39) T127K probably benign Het
Smurf1 A T 5: 144,821,534 (GRCm39) M496K probably damaging Het
Srgap2 A T 1: 131,247,340 (GRCm39) V564D probably damaging Het
Stk32a T C 18: 43,430,576 (GRCm39) I162T probably benign Het
Tchhl1 A T 3: 93,378,634 (GRCm39) N446I possibly damaging Het
Tmem64 T A 4: 15,266,584 (GRCm39) H211Q probably damaging Het
Trim3 T C 7: 105,262,218 (GRCm39) N586S probably benign Het
Trpm1 A G 7: 63,868,869 (GRCm39) E507G probably damaging Het
Tyk2 G T 9: 21,020,523 (GRCm39) probably benign Het
Ugt3a1 A T 15: 9,365,316 (GRCm39) K310* probably null Het
Unc13a T A 8: 72,101,586 (GRCm39) N1022Y probably damaging Het
Vmn1r172 A T 7: 23,359,228 (GRCm39) N38Y probably damaging Het
Vmn2r100 A T 17: 19,741,770 (GRCm39) I161F probably damaging Het
Zcchc17 A G 4: 130,243,108 (GRCm39) M25T probably benign Het
Zfp563 G A 17: 33,323,795 (GRCm39) R130Q probably benign Het
Zhx2 A G 15: 57,686,802 (GRCm39) S724G probably benign Het
Other mutations in Or4k39
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01328:Or4k39 APN 2 111,239,564 (GRCm39) missense probably damaging 1.00
IGL01819:Or4k39 APN 2 111,239,078 (GRCm39) missense probably damaging 0.99
IGL02109:Or4k39 APN 2 111,238,838 (GRCm39) exon noncoding transcript
R0054:Or4k39 UTSW 2 111,239,140 (GRCm39) missense probably benign 0.00
R1665:Or4k39 UTSW 2 111,239,098 (GRCm39) missense probably damaging 1.00
R2339:Or4k39 UTSW 2 111,239,534 (GRCm39) missense probably benign 0.36
R3876:Or4k39 UTSW 2 111,238,967 (GRCm39) missense possibly damaging 0.57
R4260:Or4k39 UTSW 2 111,238,850 (GRCm39) exon noncoding transcript
R4439:Or4k39 UTSW 2 111,239,653 (GRCm39) exon noncoding transcript
R4762:Or4k39 UTSW 2 111,239,225 (GRCm39) exon noncoding transcript
R4821:Or4k39 UTSW 2 111,239,570 (GRCm39) exon noncoding transcript
R5120:Or4k39 UTSW 2 111,239,585 (GRCm39) exon noncoding transcript
R5215:Or4k39 UTSW 2 111,239,631 (GRCm39) exon noncoding transcript
R5244:Or4k39 UTSW 2 111,238,899 (GRCm39) exon noncoding transcript
R5667:Or4k39 UTSW 2 111,238,818 (GRCm39) exon noncoding transcript
R5671:Or4k39 UTSW 2 111,238,818 (GRCm39) exon noncoding transcript
R5687:Or4k39 UTSW 2 111,239,033 (GRCm39) exon noncoding transcript
Posted On 2015-04-16