Incidental Mutation 'IGL02424:Vmn1r69'
ID |
292813 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn1r69
|
Ensembl Gene |
ENSMUSG00000091662 |
Gene Name |
vomeronasal 1 receptor 69 |
Synonyms |
V1re9 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.057)
|
Stock # |
IGL02424
|
Quality Score |
|
Status
|
|
Chromosome |
7 |
Chromosomal Location |
10313683-10315414 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 10314585 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Valine
at position 49
(I49V)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154076
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000163658]
[ENSMUST00000176284]
[ENSMUST00000176707]
[ENSMUST00000226160]
[ENSMUST00000226190]
[ENSMUST00000226228]
[ENSMUST00000228478]
[ENSMUST00000228296]
[ENSMUST00000227853]
[ENSMUST00000228638]
|
AlphaFold |
Q8VIC1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000163658
AA Change: I49V
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
SMART Domains |
Protein: ENSMUSP00000129646 Gene: ENSMUSG00000091662 AA Change: I49V
Domain | Start | End | E-Value | Type |
Pfam:V1R
|
50 |
307 |
3.3e-32 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176284
AA Change: I49V
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000176707
AA Change: I49V
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226160
AA Change: I49V
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226190
AA Change: I49V
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226228
AA Change: I49V
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000226990
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000228478
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000228296
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000227853
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000228638
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 43 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930579F01Rik |
A |
G |
3: 137,880,466 (GRCm39) |
|
probably benign |
Het |
A930011G23Rik |
A |
G |
5: 99,377,236 (GRCm39) |
S404P |
probably damaging |
Het |
A930011G23Rik |
G |
A |
5: 99,377,241 (GRCm39) |
P402L |
probably damaging |
Het |
Abl1 |
G |
A |
2: 31,691,144 (GRCm39) |
V888I |
probably benign |
Het |
Adcy9 |
G |
T |
16: 4,106,461 (GRCm39) |
N884K |
probably damaging |
Het |
Alyref |
T |
C |
11: 120,486,133 (GRCm39) |
N176D |
probably benign |
Het |
Amtn |
T |
C |
5: 88,529,456 (GRCm39) |
|
probably benign |
Het |
Baz1b |
T |
C |
5: 135,246,833 (GRCm39) |
Y761H |
probably damaging |
Het |
Cckar |
T |
A |
5: 53,863,770 (GRCm39) |
T64S |
possibly damaging |
Het |
Csmd1 |
A |
G |
8: 16,142,340 (GRCm39) |
F1521S |
probably benign |
Het |
Cyp11b1 |
T |
C |
15: 74,711,085 (GRCm39) |
T198A |
probably benign |
Het |
Def8 |
G |
T |
8: 124,186,387 (GRCm39) |
L399F |
possibly damaging |
Het |
Epha7 |
A |
T |
4: 28,948,790 (GRCm39) |
|
probably benign |
Het |
Ets1 |
T |
A |
9: 32,665,589 (GRCm39) |
Y181* |
probably null |
Het |
Fas |
A |
T |
19: 34,304,434 (GRCm39) |
M232L |
probably damaging |
Het |
Fkbp10 |
T |
A |
11: 100,306,782 (GRCm39) |
V37E |
probably damaging |
Het |
Galnt3 |
A |
G |
2: 65,926,132 (GRCm39) |
|
probably null |
Het |
Gdap1 |
T |
C |
1: 17,231,402 (GRCm39) |
V249A |
probably damaging |
Het |
Gm5356 |
T |
A |
8: 89,913,594 (GRCm39) |
|
noncoding transcript |
Het |
Gm7732 |
A |
G |
17: 21,349,709 (GRCm39) |
|
noncoding transcript |
Het |
Gpr3 |
G |
T |
4: 132,938,405 (GRCm39) |
A89E |
probably damaging |
Het |
Kat2a |
A |
G |
11: 100,601,973 (GRCm39) |
|
probably null |
Het |
Kit |
T |
G |
5: 75,799,766 (GRCm39) |
D499E |
probably benign |
Het |
Kmt2a |
C |
T |
9: 44,735,932 (GRCm39) |
|
probably benign |
Het |
Med12l |
T |
C |
3: 59,000,143 (GRCm39) |
L666P |
probably benign |
Het |
Mmp2 |
T |
G |
8: 93,562,635 (GRCm39) |
C291G |
probably damaging |
Het |
Neb |
A |
G |
2: 52,154,203 (GRCm39) |
Y2303H |
probably damaging |
Het |
Or14a259 |
C |
A |
7: 86,012,688 (GRCm39) |
V286L |
probably benign |
Het |
Or1d2 |
T |
A |
11: 74,256,299 (GRCm39) |
M268K |
probably benign |
Het |
Or1o2 |
T |
C |
17: 37,543,263 (GRCm39) |
|
probably benign |
Het |
Pde1b |
T |
A |
15: 103,436,646 (GRCm39) |
|
probably benign |
Het |
Prl7a2 |
A |
C |
13: 27,851,953 (GRCm39) |
C9G |
probably null |
Het |
Rabl6 |
A |
G |
2: 25,477,469 (GRCm39) |
V327A |
probably benign |
Het |
Robo2 |
T |
A |
16: 73,770,189 (GRCm39) |
I516F |
possibly damaging |
Het |
Ror2 |
C |
T |
13: 53,264,764 (GRCm39) |
S764N |
probably damaging |
Het |
Slc35a3 |
G |
A |
3: 116,488,267 (GRCm39) |
T140I |
possibly damaging |
Het |
Slc38a7 |
A |
G |
8: 96,568,200 (GRCm39) |
V395A |
probably damaging |
Het |
Stag3 |
T |
A |
5: 138,280,247 (GRCm39) |
C37* |
probably null |
Het |
Stag3 |
T |
C |
5: 138,289,628 (GRCm39) |
L266P |
probably damaging |
Het |
Strn |
A |
G |
17: 78,991,780 (GRCm39) |
S180P |
probably damaging |
Het |
Sulf1 |
A |
G |
1: 12,867,064 (GRCm39) |
T83A |
probably benign |
Het |
Vrk2 |
G |
A |
11: 26,426,564 (GRCm39) |
P387L |
probably benign |
Het |
Xdh |
A |
T |
17: 74,233,565 (GRCm39) |
M183K |
probably benign |
Het |
|
Other mutations in Vmn1r69 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00155:Vmn1r69
|
APN |
7 |
10,313,879 (GRCm39) |
missense |
probably benign |
0.00 |
IGL01972:Vmn1r69
|
APN |
7 |
10,314,586 (GRCm39) |
nonsense |
probably null |
|
IGL02339:Vmn1r69
|
APN |
7 |
10,314,645 (GRCm39) |
nonsense |
probably null |
|
IGL02602:Vmn1r69
|
APN |
7 |
10,313,901 (GRCm39) |
missense |
probably benign |
0.14 |
IGL03271:Vmn1r69
|
APN |
7 |
10,314,596 (GRCm39) |
missense |
probably benign |
0.11 |
R0034:Vmn1r69
|
UTSW |
7 |
10,314,738 (GRCm39) |
intron |
probably benign |
|
R0052:Vmn1r69
|
UTSW |
7 |
10,314,327 (GRCm39) |
missense |
probably benign |
0.00 |
R0096:Vmn1r69
|
UTSW |
7 |
10,313,985 (GRCm39) |
missense |
probably damaging |
1.00 |
R0539:Vmn1r69
|
UTSW |
7 |
10,314,874 (GRCm39) |
splice site |
probably benign |
|
R0604:Vmn1r69
|
UTSW |
7 |
10,314,581 (GRCm39) |
missense |
probably benign |
0.00 |
R1681:Vmn1r69
|
UTSW |
7 |
10,314,179 (GRCm39) |
missense |
probably benign |
0.06 |
R1884:Vmn1r69
|
UTSW |
7 |
10,314,678 (GRCm39) |
missense |
probably benign |
0.00 |
R3741:Vmn1r69
|
UTSW |
7 |
10,314,069 (GRCm39) |
missense |
possibly damaging |
0.47 |
R4655:Vmn1r69
|
UTSW |
7 |
10,314,026 (GRCm39) |
missense |
probably benign |
0.03 |
R4735:Vmn1r69
|
UTSW |
7 |
10,314,926 (GRCm39) |
utr 5 prime |
probably benign |
|
R4758:Vmn1r69
|
UTSW |
7 |
10,314,473 (GRCm39) |
missense |
probably benign |
0.00 |
R5582:Vmn1r69
|
UTSW |
7 |
10,314,435 (GRCm39) |
missense |
probably damaging |
1.00 |
R5966:Vmn1r69
|
UTSW |
7 |
10,314,717 (GRCm39) |
missense |
probably benign |
0.00 |
R5977:Vmn1r69
|
UTSW |
7 |
10,314,417 (GRCm39) |
missense |
probably damaging |
1.00 |
R6458:Vmn1r69
|
UTSW |
7 |
10,314,365 (GRCm39) |
missense |
probably benign |
|
R6987:Vmn1r69
|
UTSW |
7 |
10,314,491 (GRCm39) |
start codon destroyed |
probably null |
0.99 |
R7133:Vmn1r69
|
UTSW |
7 |
10,314,995 (GRCm39) |
intron |
probably benign |
|
R7532:Vmn1r69
|
UTSW |
7 |
10,314,281 (GRCm39) |
missense |
probably damaging |
0.98 |
R7878:Vmn1r69
|
UTSW |
7 |
10,314,717 (GRCm39) |
missense |
probably benign |
0.00 |
R9100:Vmn1r69
|
UTSW |
7 |
10,314,064 (GRCm39) |
missense |
probably damaging |
0.98 |
R9558:Vmn1r69
|
UTSW |
7 |
10,314,185 (GRCm39) |
missense |
probably benign |
|
Z1176:Vmn1r69
|
UTSW |
7 |
10,314,023 (GRCm39) |
missense |
possibly damaging |
0.64 |
|
Posted On |
2015-04-16 |