Incidental Mutation 'IGL02432:Vmn1r30'
ID293156
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r30
Ensembl Gene ENSMUSG00000095670
Gene Namevomeronasal 1 receptor 30
SynonymsV1rc9, V1rc22
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.096) question?
Stock #IGL02432
Quality Score
Status
Chromosome6
Chromosomal Location58434159-58443385 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 58435670 bp
ZygosityHeterozygous
Amino Acid Change Asparagine to Serine at position 59 (N59S)
Ref Sequence ENSEMBL: ENSMUSP00000154098 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000078890] [ENSMUST00000226334] [ENSMUST00000227466] [ENSMUST00000228577] [ENSMUST00000228635]
Predicted Effect probably benign
Transcript: ENSMUST00000078890
AA Change: N59S

PolyPhen 2 Score 0.043 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000087336
Gene: ENSMUSG00000095670
AA Change: N59S

DomainStartEndE-ValueType
Pfam:V1R 29 293 4.8e-53 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000203463
Predicted Effect probably benign
Transcript: ENSMUST00000226334
AA Change: N59S

PolyPhen 2 Score 0.043 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000227466
AA Change: N59S

PolyPhen 2 Score 0.043 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000228577
AA Change: N59S

PolyPhen 2 Score 0.043 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000228635
AA Change: N59S

PolyPhen 2 Score 0.043 (Sensitivity: 0.94; Specificity: 0.83)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 22 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921509C19Rik G A 2: 151,472,561 T399M probably benign Het
A830018L16Rik A T 1: 11,748,079 N321I probably damaging Het
Aimp1 T C 3: 132,673,977 T135A probably benign Het
Ascc3 T C 10: 50,700,493 M848T probably damaging Het
Cry2 T C 2: 92,413,667 D387G probably damaging Het
Daxx G A 17: 33,912,337 D413N probably benign Het
Gbp6 A T 5: 105,274,362 V492E probably benign Het
Itpr2 T A 6: 146,325,173 M1358L probably benign Het
Med13l T A 5: 118,738,400 D880E possibly damaging Het
Mmd2 A T 5: 142,575,339 I47N probably damaging Het
Mroh2b G A 15: 4,914,186 M401I probably benign Het
Nrip1 T C 16: 76,291,780 K963R probably benign Het
Otop2 A G 11: 115,329,162 H276R probably damaging Het
Pxn T A 5: 115,545,746 D79E probably damaging Het
Rho G A 6: 115,932,185 V61I probably damaging Het
Rtp1 A G 16: 23,431,404 Y173C probably damaging Het
Slc6a17 T C 3: 107,493,177 D212G possibly damaging Het
Stpg1 A G 4: 135,508,010 E54G probably damaging Het
Tas2r119 A G 15: 32,177,707 T140A probably benign Het
Traf3ip3 C T 1: 193,184,576 C316Y probably damaging Het
Ttc28 G A 5: 111,223,235 A517T probably damaging Het
Vmn2r4 C T 3: 64,406,400 V387M probably benign Het
Other mutations in Vmn1r30
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01657:Vmn1r30 APN 6 58435634 missense probably benign 0.01
IGL02627:Vmn1r30 APN 6 58435761 missense probably benign 0.08
IGL02870:Vmn1r30 APN 6 58435370 missense probably benign 0.01
R0360:Vmn1r30 UTSW 6 58435277 missense probably benign 0.03
R1071:Vmn1r30 UTSW 6 58435828 missense possibly damaging 0.93
R1335:Vmn1r30 UTSW 6 58435095 missense probably damaging 1.00
R1888:Vmn1r30 UTSW 6 58435490 missense possibly damaging 0.93
R1888:Vmn1r30 UTSW 6 58435490 missense possibly damaging 0.93
R2483:Vmn1r30 UTSW 6 58435452 missense probably benign 0.02
R3622:Vmn1r30 UTSW 6 58435452 missense probably benign 0.02
R3623:Vmn1r30 UTSW 6 58435452 missense probably benign 0.02
R3624:Vmn1r30 UTSW 6 58435452 missense probably benign 0.02
R3744:Vmn1r30 UTSW 6 58435819 nonsense probably null
R3762:Vmn1r30 UTSW 6 58435293 missense probably benign 0.20
R4483:Vmn1r30 UTSW 6 58435133 missense probably damaging 1.00
R4484:Vmn1r30 UTSW 6 58435133 missense probably damaging 1.00
R5160:Vmn1r30 UTSW 6 58435383 missense probably benign 0.03
R5408:Vmn1r30 UTSW 6 58435044 missense probably benign 0.03
R5461:Vmn1r30 UTSW 6 58435774 nonsense probably null
R5888:Vmn1r30 UTSW 6 58435565 missense possibly damaging 0.94
R7068:Vmn1r30 UTSW 6 58435010 missense possibly damaging 0.94
R7490:Vmn1r30 UTSW 6 58435229 missense possibly damaging 0.80
R7680:Vmn1r30 UTSW 6 58435299 nonsense probably null
R7751:Vmn1r30 UTSW 6 58435412 missense probably benign 0.03
R8516:Vmn1r30 UTSW 6 58435124 missense probably damaging 0.96
Posted On2015-04-16