Incidental Mutation 'IGL02451:Cldnd2'
ID 293632
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Cldnd2
Ensembl Gene ENSMUSG00000038973
Gene Name claudin domain containing 2
Synonyms 1700071E18Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.059) question?
Stock # IGL02451
Quality Score
Status
Chromosome 7
Chromosomal Location 43090206-43092758 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 43091082 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Lysine to Glutamic Acid at position 5 (K5E)
Ref Sequence ENSEMBL: ENSMUSP00000145638 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000004729] [ENSMUST00000040227] [ENSMUST00000070518] [ENSMUST00000203633] [ENSMUST00000204680] [ENSMUST00000206196] [ENSMUST00000206839] [ENSMUST00000206741] [ENSMUST00000206286]
AlphaFold Q9D9H2
Predicted Effect probably benign
Transcript: ENSMUST00000004729
SMART Domains Protein: ENSMUSP00000004729
Gene: ENSMUSG00000004610

DomainStartEndE-ValueType
ETF 26 218 4.15e-67 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000040227
AA Change: K5E

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000037980
Gene: ENSMUSG00000038973
AA Change: K5E

DomainStartEndE-ValueType
Pfam:PMP22_Claudin 6 147 2.7e-19 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000070518
SMART Domains Protein: ENSMUSP00000068946
Gene: ENSMUSG00000004612

DomainStartEndE-ValueType
Pfam:PMP22_Claudin 6 150 5e-14 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000203633
SMART Domains Protein: ENSMUSP00000145061
Gene: ENSMUSG00000107482

DomainStartEndE-ValueType
ETF 26 216 2.7e-65 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000204680
SMART Domains Protein: ENSMUSP00000145493
Gene: ENSMUSG00000107482

DomainStartEndE-ValueType
ETF 26 168 2.4e-17 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000206196
Predicted Effect noncoding transcript
Transcript: ENSMUST00000206251
Predicted Effect probably benign
Transcript: ENSMUST00000206839
AA Change: K5E

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000206411
Predicted Effect probably benign
Transcript: ENSMUST00000206741
Predicted Effect probably benign
Transcript: ENSMUST00000206286
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700123K08Rik T G 5: 138,561,809 (GRCm39) T126P probably damaging Het
Asic2 T C 11: 80,782,563 (GRCm39) probably benign Het
B430305J03Rik A G 3: 61,271,562 (GRCm39) probably benign Het
Bbs7 A G 3: 36,664,741 (GRCm39) F47L possibly damaging Het
Bcl2l14 G T 6: 134,400,804 (GRCm39) G75V probably benign Het
Btnl4 T C 17: 34,694,901 (GRCm39) H4R probably benign Het
Champ1 C A 8: 13,928,739 (GRCm39) P299Q probably damaging Het
Cimap3 T A 3: 105,921,820 (GRCm39) E34D probably benign Het
Ctr9 T A 7: 110,642,631 (GRCm39) L401* probably null Het
Cyp2c29 G A 19: 39,279,291 (GRCm39) G96D possibly damaging Het
Enpp4 A T 17: 44,412,315 (GRCm39) L298H probably damaging Het
Git1 T C 11: 77,391,513 (GRCm39) C222R possibly damaging Het
Gpam T C 19: 55,076,635 (GRCm39) T189A probably damaging Het
Hgfac T G 5: 35,201,158 (GRCm39) probably null Het
Hivep3 T A 4: 119,991,162 (GRCm39) S2221T probably damaging Het
Ifi47 T C 11: 48,986,604 (GRCm39) Y124H probably damaging Het
Il1a T C 2: 129,148,575 (GRCm39) E45G probably damaging Het
Itga11 T A 9: 62,642,635 (GRCm39) I186N probably damaging Het
Krt16 A T 11: 100,137,162 (GRCm39) probably benign Het
Mapk13 A G 17: 28,995,387 (GRCm39) T203A probably damaging Het
Mrpl37 T A 4: 106,923,839 (GRCm39) I52F probably damaging Het
Mtrex C T 13: 113,027,881 (GRCm39) V660M probably damaging Het
Nr1i2 A G 16: 38,069,654 (GRCm39) F417L probably benign Het
Or10ag59 T A 2: 87,405,576 (GRCm39) S49R probably benign Het
Or6c215 G A 10: 129,637,702 (GRCm39) Q231* probably null Het
Osbpl1a T C 18: 13,047,550 (GRCm39) probably benign Het
Parg C T 14: 31,964,186 (GRCm39) T112M probably damaging Het
Pou6f1 T C 15: 100,477,821 (GRCm39) T166A possibly damaging Het
Prtg A G 9: 72,764,281 (GRCm39) I585V possibly damaging Het
Ptpru T G 4: 131,504,086 (GRCm39) probably benign Het
Rab6a T C 7: 100,285,970 (GRCm39) probably null Het
Rnf207 C T 4: 152,396,869 (GRCm39) R425H probably benign Het
Rusf1 A G 7: 127,875,582 (GRCm39) L257P probably damaging Het
Slc27a2 A G 2: 126,420,912 (GRCm39) M468V probably benign Het
Slc30a1 A G 1: 191,639,441 (GRCm39) H108R possibly damaging Het
Sned1 A G 1: 93,163,930 (GRCm39) probably benign Het
Sptbn4 A T 7: 27,065,014 (GRCm39) F2095Y probably null Het
Sspo A T 6: 48,437,237 (GRCm39) probably benign Het
Tbx19 A G 1: 164,967,740 (GRCm39) S336P probably benign Het
Tmem101 T A 11: 102,044,119 (GRCm39) D256V probably damaging Het
Trbv20 T G 6: 41,165,210 (GRCm39) L2V unknown Het
Trpc7 A G 13: 56,970,274 (GRCm39) S382P probably damaging Het
Tut4 C A 4: 108,386,473 (GRCm39) Y1114* probably null Het
Uhmk1 T C 1: 170,040,095 (GRCm39) T91A possibly damaging Het
Vmn2r10 T A 5: 109,143,788 (GRCm39) R721* probably null Het
Vmn2r94 T A 17: 18,478,453 (GRCm39) Y98F possibly damaging Het
Zfp532 A G 18: 65,756,672 (GRCm39) R202G probably damaging Het
Zfp827 T C 8: 79,787,601 (GRCm39) S256P probably damaging Het
Zzef1 T C 11: 72,792,214 (GRCm39) I2266T probably damaging Het
Other mutations in Cldnd2
AlleleSourceChrCoordTypePredicted EffectPPH Score
R1836:Cldnd2 UTSW 7 43,092,349 (GRCm39) missense possibly damaging 0.86
R4731:Cldnd2 UTSW 7 43,091,613 (GRCm39) missense possibly damaging 0.71
R4732:Cldnd2 UTSW 7 43,091,613 (GRCm39) missense possibly damaging 0.71
R4733:Cldnd2 UTSW 7 43,091,613 (GRCm39) missense possibly damaging 0.71
R7309:Cldnd2 UTSW 7 43,091,133 (GRCm39) missense possibly damaging 0.71
R7456:Cldnd2 UTSW 7 43,091,109 (GRCm39) missense not run
R7955:Cldnd2 UTSW 7 43,091,120 (GRCm39) missense possibly damaging 0.93
R9426:Cldnd2 UTSW 7 43,092,688 (GRCm39) missense possibly damaging 0.53
Posted On 2015-04-16