Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02449:Vmn2r53'

294065

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Vmn2r53

Ensembl Gene

ENSMUSG00000096002

Gene Name

vomeronasal 2, receptor 53

Synonyms

EG637908

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.099) question?

Stock #

IGL02449

Quality Score

Status

Chromosome

Chromosomal Location

12315397-12342583 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 12316288 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Phenylalanine at position 510 (L510F)

Ref Sequence

ENSEMBL: ENSMUSP00000126979 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000170412]

AlphaFold

A0A3B2W4A7

Predicted Effect

probably damaging
Transcript: ENSMUST00000170412
AA Change: L510F

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000126979
Gene: ENSMUSG00000096002
AA Change: L510F

Domain	Start	End	E-Value	Type
Pfam:ANF_receptor	5	397	3.6e-58	PFAM
Pfam:NCD3G	442	495	2.2e-19	PFAM
Pfam:7tm_3	526	763	3.1e-53	PFAM

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca12	A	T	1: 71,440,908 (GRCm39)		probably null	Het
Akap6	A	G	12: 53,186,971 (GRCm39)	T1462A	probably damaging	Het
Arl6ip6	T	C	2: 53,082,538 (GRCm39)		probably benign	Het
Ascc3	A	T	10: 50,576,695 (GRCm39)	Q883H	probably benign	Het
Atp11a	T	A	8: 12,807,358 (GRCm39)		probably null	Het
Cds1	G	A	5: 101,963,794 (GRCm39)	G371D	probably damaging	Het
Col12a1	A	G	9: 79,548,751 (GRCm39)	L2198P	probably damaging	Het
Cyp2d22	C	T	15: 82,257,442 (GRCm39)	G241D	probably benign	Het
Dapk1	T	C	13: 60,867,584 (GRCm39)		probably benign	Het
Dera	T	A	6: 137,757,815 (GRCm39)		probably null	Het
Efcab6	A	G	15: 83,894,234 (GRCm39)	V186A	probably benign	Het
Gm9637	T	A	14: 19,402,436 (GRCm38)		noncoding transcript	Het
Gpr180	T	C	14: 118,397,532 (GRCm39)	L342P	probably damaging	Het
Heg1	T	C	16: 33,559,095 (GRCm39)		probably null	Het
Kcnab2	C	A	4: 152,496,441 (GRCm39)		probably null	Het
Lax1	A	G	1: 133,607,874 (GRCm39)	V289A	probably damaging	Het
Ly6k	T	G	15: 74,668,934 (GRCm39)	D115A	probably benign	Het
Mcc	A	C	18: 44,593,025 (GRCm39)	I670S	probably benign	Het
Mpdz	C	A	4: 81,247,659 (GRCm39)		probably null	Het
Mrgprb8	T	A	7: 48,038,431 (GRCm39)	L34*	probably null	Het
Mtor	T	A	4: 148,618,378 (GRCm39)	H1730Q	possibly damaging	Het
Muc4	C	T	16: 32,576,503 (GRCm39)		probably benign	Het
Myh8	T	C	11: 67,185,440 (GRCm39)		probably null	Het
Naip5	A	T	13: 100,358,683 (GRCm39)	V851E	probably benign	Het
Neb	T	C	2: 52,091,918 (GRCm39)	I1277V	probably benign	Het
Nlrp9a	T	C	7: 26,264,396 (GRCm39)	M683T	probably benign	Het
Npr2	A	G	4: 43,646,641 (GRCm39)	Y663C	probably damaging	Het
Padi3	C	T	4: 140,517,023 (GRCm39)		probably null	Het
Pclo	A	G	5: 14,565,357 (GRCm39)	D41G	probably damaging	Het
Pds5a	A	T	5: 65,776,353 (GRCm39)	N80K	probably damaging	Het
Plec	C	T	15: 76,070,963 (GRCm39)	D812N	possibly damaging	Het
Psg20	A	T	7: 18,418,333 (GRCm39)		probably benign	Het
Ptch2	C	A	4: 116,965,380 (GRCm39)	L322I	possibly damaging	Het
Ptprv	T	C	1: 135,039,074 (GRCm39)		noncoding transcript	Het
Scn2b	A	G	9: 45,036,812 (GRCm39)	K107E	probably damaging	Het
Slc24a4	A	C	12: 102,193,341 (GRCm39)	I226L	probably benign	Het
Spink4	A	G	4: 40,929,190 (GRCm39)	M72V	probably benign	Het
Supt16	A	T	14: 52,411,263 (GRCm39)	M676K	possibly damaging	Het
Svep1	A	C	4: 58,070,296 (GRCm39)	C2497G	possibly damaging	Het
Tenm2	T	A	11: 35,914,449 (GRCm39)	T2362S	probably damaging	Het
Tgm3	G	T	2: 129,880,529 (GRCm39)		probably null	Het
Trpa1	T	A	1: 14,968,381 (GRCm39)	T462S	probably damaging	Het
Ucp2	G	A	7: 100,148,017 (GRCm39)	V237M	probably damaging	Het
Zan	G	A	5: 137,387,589 (GRCm39)	T4874M	unknown	Het
Zfp13	C	T	17: 23,795,072 (GRCm39)	A493T	probably benign	Het
Zfp974	T	A	7: 27,611,152 (GRCm39)	Y191F	probably benign	Het

Other mutations in Vmn2r53

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01090:Vmn2r53	APN	7	12,334,835 (GRCm39)	missense	possibly damaging	0.70
IGL01997:Vmn2r53	APN	7	12,316,373 (GRCm39)	missense	possibly damaging	0.54
IGL02442:Vmn2r53	APN	7	12,315,656 (GRCm39)	missense	probably damaging	1.00
IGL02589:Vmn2r53	APN	7	12,315,872 (GRCm39)	missense	possibly damaging	0.93
IGL02986:Vmn2r53	APN	7	12,315,393 (GRCm39)	unclassified	probably benign
IGL03064:Vmn2r53	APN	7	12,334,937 (GRCm39)	missense	possibly damaging	0.89
IGL03093:Vmn2r53	APN	7	12,334,791 (GRCm39)	missense	probably benign	0.03
IGL03244:Vmn2r53	APN	7	12,340,435 (GRCm39)	missense	probably damaging	1.00
IGL03252:Vmn2r53	APN	7	12,340,318 (GRCm39)	missense	probably damaging	1.00
IGL03264:Vmn2r53	APN	7	12,315,819 (GRCm39)	missense	possibly damaging	0.95
IGL03293:Vmn2r53	APN	7	12,332,349 (GRCm39)	missense	probably benign	0.34
R0109:Vmn2r53	UTSW	7	12,315,993 (GRCm39)	missense	probably damaging	1.00
R0453:Vmn2r53	UTSW	7	12,316,338 (GRCm39)	missense	probably damaging	1.00
R0735:Vmn2r53	UTSW	7	12,315,707 (GRCm39)	missense	probably benign
R0881:Vmn2r53	UTSW	7	12,334,859 (GRCm39)	missense	probably benign	0.01
R0894:Vmn2r53	UTSW	7	12,335,141 (GRCm39)	missense	probably benign	0.00
R0973:Vmn2r53	UTSW	7	12,335,319 (GRCm39)	missense	probably damaging	1.00
R0973:Vmn2r53	UTSW	7	12,335,319 (GRCm39)	missense	probably damaging	1.00
R0974:Vmn2r53	UTSW	7	12,335,319 (GRCm39)	missense	probably damaging	1.00
R0990:Vmn2r53	UTSW	7	12,315,429 (GRCm39)	missense	probably benign
R1102:Vmn2r53	UTSW	7	12,332,410 (GRCm39)	missense	possibly damaging	0.94
R1141:Vmn2r53	UTSW	7	12,334,673 (GRCm39)	missense	possibly damaging	0.54
R1263:Vmn2r53	UTSW	7	12,315,533 (GRCm39)	missense	probably benign	0.41
R1343:Vmn2r53	UTSW	7	12,318,701 (GRCm39)	missense	probably benign	0.08
R1750:Vmn2r53	UTSW	7	12,315,632 (GRCm39)	missense	probably damaging	1.00
R1836:Vmn2r53	UTSW	7	12,334,812 (GRCm39)	missense	probably damaging	1.00
R2035:Vmn2r53	UTSW	7	12,332,438 (GRCm39)	missense	possibly damaging	0.76
R2202:Vmn2r53	UTSW	7	12,335,366 (GRCm39)	missense	probably damaging	1.00
R3707:Vmn2r53	UTSW	7	12,315,981 (GRCm39)	missense	possibly damaging	0.95
R4372:Vmn2r53	UTSW	7	12,315,656 (GRCm39)	missense	probably damaging	0.98
R4615:Vmn2r53	UTSW	7	12,316,229 (GRCm39)	missense	probably damaging	1.00
R4655:Vmn2r53	UTSW	7	12,315,932 (GRCm39)	missense	possibly damaging	0.83
R4663:Vmn2r53	UTSW	7	12,334,901 (GRCm39)	missense	probably benign	0.21
R4708:Vmn2r53	UTSW	7	12,335,129 (GRCm39)	missense	probably benign
R4710:Vmn2r53	UTSW	7	12,335,129 (GRCm39)	missense	probably benign
R4774:Vmn2r53	UTSW	7	12,334,692 (GRCm39)	nonsense	probably null
R4859:Vmn2r53	UTSW	7	12,335,330 (GRCm39)	missense	probably damaging	1.00
R5061:Vmn2r53	UTSW	7	12,315,741 (GRCm39)	missense	probably benign	0.01
R5561:Vmn2r53	UTSW	7	12,335,347 (GRCm39)	missense	probably damaging	1.00
R5729:Vmn2r53	UTSW	7	12,334,733 (GRCm39)	missense	probably damaging	1.00
R6004:Vmn2r53	UTSW	7	12,316,328 (GRCm39)	missense	probably benign	0.12
R6083:Vmn2r53	UTSW	7	12,315,808 (GRCm39)	missense	probably benign
R6312:Vmn2r53	UTSW	7	12,332,566 (GRCm39)	critical splice acceptor site	probably null
R6700:Vmn2r53	UTSW	7	12,315,633 (GRCm39)	missense	probably damaging	0.96
R6783:Vmn2r53	UTSW	7	12,335,360 (GRCm39)	missense	probably damaging	1.00
R6852:Vmn2r53	UTSW	7	12,340,441 (GRCm39)	missense	probably damaging	0.99
R6889:Vmn2r53	UTSW	7	12,335,069 (GRCm39)	missense	probably benign	0.10
R6940:Vmn2r53	UTSW	7	12,316,343 (GRCm39)	missense	probably benign	0.19
R7100:Vmn2r53	UTSW	7	12,315,513 (GRCm39)	nonsense	probably null
R7174:Vmn2r53	UTSW	7	12,315,628 (GRCm39)	missense	probably benign	0.01
R7213:Vmn2r53	UTSW	7	12,334,983 (GRCm39)	missense	probably benign	0.17
R7276:Vmn2r53	UTSW	7	12,340,359 (GRCm39)	missense	probably damaging	0.99
R7515:Vmn2r53	UTSW	7	12,315,846 (GRCm39)	missense	probably benign	0.05
R7678:Vmn2r53	UTSW	7	12,332,425 (GRCm39)	missense	probably benign	0.04
R7714:Vmn2r53	UTSW	7	12,340,418 (GRCm39)	missense	probably damaging	1.00
R7843:Vmn2r53	UTSW	7	12,316,026 (GRCm39)	missense	probably damaging	1.00
R8208:Vmn2r53	UTSW	7	12,335,322 (GRCm39)	missense	probably damaging	1.00
R8211:Vmn2r53	UTSW	7	12,315,843 (GRCm39)	missense	probably benign	0.01
R8478:Vmn2r53	UTSW	7	12,340,281 (GRCm39)	missense	probably benign	0.01
R8853:Vmn2r53	UTSW	7	12,315,737 (GRCm39)	missense	probably damaging	1.00
R8924:Vmn2r53	UTSW	7	12,334,752 (GRCm39)	missense	probably benign	0.17
R8963:Vmn2r53	UTSW	7	12,315,926 (GRCm39)	missense	probably damaging	1.00
R9042:Vmn2r53	UTSW	7	12,315,435 (GRCm39)	missense	probably benign
R9076:Vmn2r53	UTSW	7	12,340,231 (GRCm39)	missense	probably damaging	1.00
R9407:Vmn2r53	UTSW	7	12,335,124 (GRCm39)	missense	probably damaging	0.99
R9690:Vmn2r53	UTSW	7	12,315,912 (GRCm39)	missense	probably damaging	1.00
Z1176:Vmn2r53	UTSW	7	12,335,231 (GRCm39)	missense	probably damaging	1.00

Posted On

2015-04-16