Incidental Mutation 'IGL02395:Vmn1r90'
ID 294304
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r90
Ensembl Gene ENSMUSG00000100586
Gene Name vomeronasal 1 receptor 90
Synonyms B430211C08Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.052) question?
Stock # IGL02395
Quality Score
Status
Chromosome 7
Chromosomal Location 14295167-14296096 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 14295822 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Cysteine at position 92 (Y92C)
Ref Sequence ENSEMBL: ENSMUSP00000153726 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000185220] [ENSMUST00000226264] [ENSMUST00000227566] [ENSMUST00000226510] [ENSMUST00000226802] [ENSMUST00000227692] [ENSMUST00000227788] [ENSMUST00000227855]
AlphaFold A0A087WR36
Predicted Effect noncoding transcript
Transcript: ENSMUST00000044683
Predicted Effect noncoding transcript
Transcript: ENSMUST00000173220
Predicted Effect noncoding transcript
Transcript: ENSMUST00000173766
Predicted Effect noncoding transcript
Transcript: ENSMUST00000185025
Predicted Effect probably damaging
Transcript: ENSMUST00000185220
AA Change: Y92C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000140455
Gene: ENSMUSG00000100586
AA Change: Y92C

DomainStartEndE-ValueType
Pfam:TAS2R 8 296 3.9e-9 PFAM
Pfam:V1R 41 295 2.7e-13 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000226264
AA Change: Y92C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000227566
AA Change: Y85C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000226510
AA Change: Y10C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000226802
AA Change: Y92C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000227692
AA Change: Y92C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000227788
AA Change: Y92C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000227855
AA Change: Y92C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
Predicted Effect noncoding transcript
Transcript: ENSMUST00000226981
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 29 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4833420G17Rik T A 13: 119,617,496 (GRCm39) C540S probably damaging Het
Cdk5 A G 5: 24,624,635 (GRCm39) V252A possibly damaging Het
Ddi2 C T 4: 141,422,725 (GRCm39) R329Q possibly damaging Het
Dennd2c T A 3: 103,065,081 (GRCm39) F678I probably benign Het
Ect2 T C 3: 27,204,255 (GRCm39) D18G probably damaging Het
Efcab11 C A 12: 99,820,868 (GRCm39) probably null Het
Eri2 T C 7: 119,387,033 (GRCm39) E162G probably damaging Het
Fam120b T C 17: 15,622,777 (GRCm39) S252P probably damaging Het
Filip1 G A 9: 79,805,692 (GRCm39) P21S probably benign Het
Kmt5b T A 19: 3,864,887 (GRCm39) D627E probably benign Het
Krt87 T C 15: 101,385,833 (GRCm39) D254G probably benign Het
Man1a2 T C 3: 100,551,853 (GRCm39) probably null Het
Mapk15 T C 15: 75,870,019 (GRCm39) S380P probably benign Het
Mrpl48 G T 7: 100,195,551 (GRCm39) probably benign Het
Nme8 T A 13: 19,862,078 (GRCm39) I184L possibly damaging Het
Nrk A G X: 137,876,935 (GRCm39) E712G probably damaging Het
Or4c110 T A 2: 88,832,507 (GRCm39) T42S probably benign Het
Or4k6 C A 14: 50,475,886 (GRCm39) G152V probably damaging Het
Or5m5 A G 2: 85,814,426 (GRCm39) T81A possibly damaging Het
Or6z6 C T 7: 6,491,802 (GRCm39) V17M possibly damaging Het
Plekho1 A T 3: 95,902,876 (GRCm39) Y36* probably null Het
Slco1a5 T A 6: 142,221,213 (GRCm39) H11L probably damaging Het
Tiam2 T A 17: 3,471,756 (GRCm39) M466K possibly damaging Het
Tmem214 G A 5: 31,030,090 (GRCm39) A296T probably benign Het
Tnfrsf22 A T 7: 143,197,053 (GRCm39) N95K probably damaging Het
Zc2hc1a T A 3: 7,593,684 (GRCm39) L214* probably null Het
Zcchc17 C A 4: 130,230,920 (GRCm39) V90F probably damaging Het
Zcchc7 T C 4: 44,761,868 (GRCm39) probably benign Het
Zmiz1 T C 14: 25,657,187 (GRCm39) V821A probably damaging Het
Other mutations in Vmn1r90
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03282:Vmn1r90 APN 7 14,296,093 (GRCm39) missense possibly damaging 0.92
IGL03282:Vmn1r90 APN 7 14,295,426 (GRCm39) missense probably benign 0.36
IGL03365:Vmn1r90 APN 7 14,295,229 (GRCm39) missense probably damaging 0.99
R2519:Vmn1r90 UTSW 7 14,295,643 (GRCm39) missense probably damaging 1.00
R2996:Vmn1r90 UTSW 7 14,295,459 (GRCm39) missense probably damaging 1.00
R4086:Vmn1r90 UTSW 7 14,297,219 (GRCm39) splice site probably benign
R4303:Vmn1r90 UTSW 7 14,295,495 (GRCm39) nonsense probably null
R4508:Vmn1r90 UTSW 7 14,296,084 (GRCm39) missense probably benign 0.01
R4551:Vmn1r90 UTSW 7 14,295,894 (GRCm39) missense possibly damaging 0.88
R4672:Vmn1r90 UTSW 7 14,295,493 (GRCm39) missense probably benign 0.25
R4915:Vmn1r90 UTSW 7 14,295,950 (GRCm39) missense possibly damaging 0.82
R5227:Vmn1r90 UTSW 7 14,295,601 (GRCm39) missense possibly damaging 0.50
R5629:Vmn1r90 UTSW 7 14,296,011 (GRCm39) missense possibly damaging 0.48
R5888:Vmn1r90 UTSW 7 14,295,780 (GRCm39) missense probably damaging 1.00
R7532:Vmn1r90 UTSW 7 14,295,189 (GRCm39) missense possibly damaging 0.75
R7644:Vmn1r90 UTSW 7 14,295,616 (GRCm39) nonsense probably null
R9429:Vmn1r90 UTSW 7 14,295,647 (GRCm39) missense probably damaging 1.00
Posted On 2015-04-16