Incidental Mutation 'IGL02474:Vmn2r109'
ID 294862
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn2r109
Ensembl Gene ENSMUSG00000090572
Gene Name vomeronasal 2, receptor 109
Synonyms EG627814
Accession Numbers
Essential gene? Probably non essential (E-score: 0.074) question?
Stock # IGL02474
Quality Score
Status
Chromosome 17
Chromosomal Location 20540517-20564756 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to T at 20540888 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Isoleucine at position 736 (F736I)
Ref Sequence ENSEMBL: ENSMUSP00000132641 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000167093]
AlphaFold K7N747
Predicted Effect probably benign
Transcript: ENSMUST00000167093
AA Change: F736I

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000132641
Gene: ENSMUSG00000090572
AA Change: F736I

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
Pfam:ANF_receptor 83 467 1.4e-35 PFAM
Pfam:NCD3G 510 563 3.1e-21 PFAM
Pfam:7tm_3 596 831 7.4e-52 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 43 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Afdn A G 17: 13,818,229 (GRCm38) E283G probably damaging Het
Ahnak A G 19: 9,004,933 (GRCm38) I1194V probably benign Het
Aqr T A 2: 114,112,646 (GRCm38) N1149Y probably damaging Het
Bms1 T C 6: 118,416,519 (GRCm38) I131V probably benign Het
Cacna1s A C 1: 136,118,380 (GRCm38) T1461P probably benign Het
Chrnb3 T C 8: 27,393,369 (GRCm38) S113P probably damaging Het
Col1a2 C T 6: 4,516,398 (GRCm38) R171C unknown Het
Cramp1l A G 17: 24,985,050 (GRCm38) V318A probably damaging Het
Csf2ra A G 19: 61,226,537 (GRCm38) V163A possibly damaging Het
Csgalnact1 C A 8: 68,401,492 (GRCm38) G219V probably damaging Het
Ctnnd2 A G 15: 30,669,562 (GRCm38) D439G possibly damaging Het
Dnah11 T A 12: 118,027,445 (GRCm38) probably null Het
Dyrk4 C A 6: 126,880,231 (GRCm38) C495F probably damaging Het
Gabra6 A G 11: 42,307,417 (GRCm38) V402A probably benign Het
Gba2 T C 4: 43,568,538 (GRCm38) M643V possibly damaging Het
Gbp9 A T 5: 105,094,567 (GRCm38) probably benign Het
Ginm1 A G 10: 7,777,768 (GRCm38) probably benign Het
Git1 T A 11: 77,503,391 (GRCm38) D282E probably damaging Het
Gm5799 T C 14: 43,544,629 (GRCm38) I86T probably damaging Het
Gm9894 T C 13: 67,765,094 (GRCm38) noncoding transcript Het
Gng12 A G 6: 67,015,761 (GRCm38) K4R probably benign Het
Hnrnpul1 A T 7: 25,726,757 (GRCm38) D556E probably benign Het
Kat6b T A 14: 21,669,039 (GRCm38) L1153Q possibly damaging Het
Ly75 A T 2: 60,383,182 (GRCm38) L17Q probably null Het
Mc5r T C 18: 68,338,839 (GRCm38) F90L probably damaging Het
Olfr1356 A T 10: 78,847,063 (GRCm38) M284K probably damaging Het
Olfr175-ps1 A T 16: 58,824,656 (GRCm38) S18T probably benign Het
Olfr524 T C 7: 140,202,587 (GRCm38) Y61C probably damaging Het
Olfr54 C A 11: 51,027,365 (GRCm38) A121D probably damaging Het
Olfr877 A T 9: 37,855,360 (GRCm38) I181L probably benign Het
Pi4ka A T 16: 17,325,429 (GRCm38) Y6N probably damaging Het
Polr2g C A 19: 8,798,456 (GRCm38) probably null Het
Psme3 A G 11: 101,317,654 (GRCm38) Q82R probably benign Het
Rab11a G T 9: 64,726,647 (GRCm38) T17K possibly damaging Het
Rbm12 A T 2: 156,098,097 (GRCm38) L85Q probably damaging Het
Skap1 A T 11: 96,708,686 (GRCm38) Y188F probably damaging Het
Tmprss6 A T 15: 78,442,336 (GRCm38) F34I probably damaging Het
Trip12 A C 1: 84,794,133 (GRCm38) I98S probably benign Het
Ttn T C 2: 76,878,188 (GRCm38) probably benign Het
Ube2t A T 1: 134,971,341 (GRCm38) K21* probably null Het
Vmn1r216 T C 13: 23,099,477 (GRCm38) V110A possibly damaging Het
Vps13c A G 9: 67,937,876 (GRCm38) T2081A probably benign Het
Zfp13 C T 17: 23,576,098 (GRCm38) A493T probably benign Het
Other mutations in Vmn2r109
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01313:Vmn2r109 APN 17 20,550,157 (GRCm38) missense probably damaging 1.00
IGL01383:Vmn2r109 APN 17 20,541,121 (GRCm38) missense possibly damaging 0.89
IGL01469:Vmn2r109 APN 17 20,541,409 (GRCm38) missense probably damaging 1.00
IGL01762:Vmn2r109 APN 17 20,554,392 (GRCm38) missense probably benign
IGL01864:Vmn2r109 APN 17 20,541,134 (GRCm38) missense probably benign 0.28
IGL02028:Vmn2r109 APN 17 20,541,080 (GRCm38) missense probably benign 0.28
IGL02074:Vmn2r109 APN 17 20,554,341 (GRCm38) missense probably benign 0.05
IGL02162:Vmn2r109 APN 17 20,554,160 (GRCm38) missense probably benign 0.01
IGL02490:Vmn2r109 APN 17 20,540,984 (GRCm38) missense possibly damaging 0.78
IGL02604:Vmn2r109 APN 17 20,540,701 (GRCm38) missense probably damaging 1.00
IGL02669:Vmn2r109 APN 17 20,554,256 (GRCm38) missense possibly damaging 0.64
IGL02705:Vmn2r109 APN 17 20,553,800 (GRCm38) missense probably benign
IGL02745:Vmn2r109 APN 17 20,541,250 (GRCm38) missense probably damaging 0.99
PIT4142001:Vmn2r109 UTSW 17 20,554,577 (GRCm38) critical splice acceptor site probably null
R0389:Vmn2r109 UTSW 17 20,541,074 (GRCm38) missense probably damaging 1.00
R0470:Vmn2r109 UTSW 17 20,552,886 (GRCm38) missense probably benign 0.06
R0570:Vmn2r109 UTSW 17 20,540,675 (GRCm38) missense probably damaging 0.99
R0855:Vmn2r109 UTSW 17 20,541,408 (GRCm38) nonsense probably null
R0882:Vmn2r109 UTSW 17 20,554,580 (GRCm38) splice site probably benign
R1241:Vmn2r109 UTSW 17 20,555,241 (GRCm38) missense possibly damaging 0.86
R1587:Vmn2r109 UTSW 17 20,540,740 (GRCm38) missense probably damaging 1.00
R1931:Vmn2r109 UTSW 17 20,553,810 (GRCm38) nonsense probably null
R1957:Vmn2r109 UTSW 17 20,564,707 (GRCm38) missense probably benign 0.11
R1962:Vmn2r109 UTSW 17 20,553,923 (GRCm38) missense probably damaging 0.99
R2020:Vmn2r109 UTSW 17 20,541,186 (GRCm38) nonsense probably null
R2073:Vmn2r109 UTSW 17 20,564,712 (GRCm38) missense probably benign 0.00
R2436:Vmn2r109 UTSW 17 20,554,536 (GRCm38) missense probably damaging 0.99
R3123:Vmn2r109 UTSW 17 20,540,986 (GRCm38) missense probably damaging 1.00
R3839:Vmn2r109 UTSW 17 20,554,442 (GRCm38) missense probably damaging 1.00
R4019:Vmn2r109 UTSW 17 20,553,812 (GRCm38) missense probably benign
R4428:Vmn2r109 UTSW 17 20,553,024 (GRCm38) missense probably benign
R4584:Vmn2r109 UTSW 17 20,554,558 (GRCm38) nonsense probably null
R4652:Vmn2r109 UTSW 17 20,541,394 (GRCm38) missense probably damaging 1.00
R4708:Vmn2r109 UTSW 17 20,541,343 (GRCm38) missense probably damaging 0.97
R4823:Vmn2r109 UTSW 17 20,553,891 (GRCm38) missense probably damaging 1.00
R4831:Vmn2r109 UTSW 17 20,541,232 (GRCm38) missense probably benign 0.01
R4907:Vmn2r109 UTSW 17 20,550,086 (GRCm38) missense probably damaging 1.00
R5011:Vmn2r109 UTSW 17 20,555,189 (GRCm38) missense probably damaging 1.00
R5296:Vmn2r109 UTSW 17 20,554,341 (GRCm38) missense possibly damaging 0.90
R5600:Vmn2r109 UTSW 17 20,540,927 (GRCm38) missense probably damaging 1.00
R5602:Vmn2r109 UTSW 17 20,540,671 (GRCm38) missense possibly damaging 0.94
R5652:Vmn2r109 UTSW 17 20,540,519 (GRCm38) makesense probably null
R5702:Vmn2r109 UTSW 17 20,554,145 (GRCm38) missense probably benign 0.42
R5706:Vmn2r109 UTSW 17 20,554,305 (GRCm38) missense probably benign 0.16
R5714:Vmn2r109 UTSW 17 20,552,859 (GRCm38) missense probably damaging 1.00
R5832:Vmn2r109 UTSW 17 20,541,056 (GRCm38) missense probably benign 0.10
R6008:Vmn2r109 UTSW 17 20,540,719 (GRCm38) missense probably damaging 1.00
R6334:Vmn2r109 UTSW 17 20,541,178 (GRCm38) missense probably benign 0.18
R6377:Vmn2r109 UTSW 17 20,564,534 (GRCm38) critical splice donor site probably null
R6738:Vmn2r109 UTSW 17 20,554,523 (GRCm38) missense possibly damaging 0.52
R6857:Vmn2r109 UTSW 17 20,540,670 (GRCm38) missense probably benign 0.45
R6953:Vmn2r109 UTSW 17 20,540,711 (GRCm38) missense possibly damaging 0.95
R7108:Vmn2r109 UTSW 17 20,564,744 (GRCm38) missense probably benign 0.03
R7229:Vmn2r109 UTSW 17 20,540,963 (GRCm38) missense possibly damaging 0.80
R7238:Vmn2r109 UTSW 17 20,541,074 (GRCm38) missense probably damaging 1.00
R7244:Vmn2r109 UTSW 17 20,540,683 (GRCm38) missense possibly damaging 0.70
R7292:Vmn2r109 UTSW 17 20,541,438 (GRCm38) missense probably benign 0.05
R7354:Vmn2r109 UTSW 17 20,540,781 (GRCm38) missense probably damaging 1.00
R7357:Vmn2r109 UTSW 17 20,541,274 (GRCm38) missense probably damaging 1.00
R7522:Vmn2r109 UTSW 17 20,554,403 (GRCm38) missense probably benign 0.11
R7596:Vmn2r109 UTSW 17 20,540,680 (GRCm38) missense probably damaging 0.98
R7728:Vmn2r109 UTSW 17 20,552,855 (GRCm38) missense probably damaging 0.99
R7859:Vmn2r109 UTSW 17 20,541,174 (GRCm38) missense probably damaging 1.00
R7871:Vmn2r109 UTSW 17 20,540,520 (GRCm38) missense probably benign 0.08
R8113:Vmn2r109 UTSW 17 20,554,467 (GRCm38) missense probably benign 0.01
R8153:Vmn2r109 UTSW 17 20,564,707 (GRCm38) missense probably benign 0.11
R8977:Vmn2r109 UTSW 17 20,554,269 (GRCm38) missense possibly damaging 0.96
R9687:Vmn2r109 UTSW 17 20,555,070 (GRCm38) missense
Z1176:Vmn2r109 UTSW 17 20,552,994 (GRCm38) missense probably benign 0.00
Posted On 2015-04-16