Incidental Mutation 'IGL02475:Rnaseh2b'
ID 294884
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Rnaseh2b
Ensembl Gene ENSMUSG00000021932
Gene Name ribonuclease H2, subunit B
Synonyms 2610207P08Rik, 1110019N06Rik, Dleu8
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # IGL02475
Quality Score
Status
Chromosome 14
Chromosomal Location 62569517-62610445 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 62584064 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Isoleucine at position 37 (F37I)
Ref Sequence ENSEMBL: ENSMUSP00000022499 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000022499] [ENSMUST00000166879] [ENSMUST00000169728]
AlphaFold Q80ZV0
PDB Structure mouse RNase H2 complex [X-RAY DIFFRACTION]
The structure of the human RNase H2 complex defines key interaction interfaces relevant to enzyme function and human disease [X-RAY DIFFRACTION]
Predicted Effect probably damaging
Transcript: ENSMUST00000022499
AA Change: F37I

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000022499
Gene: ENSMUSG00000021932
AA Change: F37I

DomainStartEndE-ValueType
Pfam:RNase_H2-Ydr279 14 298 6.8e-58 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000156608
Predicted Effect probably benign
Transcript: ENSMUST00000166879
SMART Domains Protein: ENSMUSP00000129165
Gene: ENSMUSG00000021932

DomainStartEndE-ValueType
Pfam:RNase_H2-Ydr279 1 65 1.2e-21 PFAM
Predicted Effect unknown
Transcript: ENSMUST00000169728
AA Change: F34I
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] RNase H2 is composed of a single catalytic subunit (A) and two non-catalytic subunits (B and C) and specifically degrades the RNA of RNA:DNA hybrids. The protein encoded by this gene is the non-catalytic B subunit of RNase H2, which is thought to play a role in DNA replication. Multiple transcript variants encoding different isoforms have been found for this gene. Defects in this gene are a cause of Aicardi-Goutieres syndrome type 2 (AGS2). [provided by RefSeq, Nov 2008]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit preweaning lethality associated with reduced cell proliferation and embryonic growth retardation. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 47 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700001J03Rik A T 5: 146,119,343 (GRCm39) probably benign Het
5730409E04Rik A G 4: 126,505,742 (GRCm39) E90G probably damaging Het
Abhd6 T A 14: 8,039,849 (GRCm38) I27N probably damaging Het
Akap6 A T 12: 53,186,277 (GRCm39) E1230D probably benign Het
Bcl2l12 A G 7: 44,646,317 (GRCm39) V31A possibly damaging Het
Cep350 G A 1: 155,738,341 (GRCm39) R2501W probably damaging Het
Cnga3 A G 1: 37,297,072 (GRCm39) probably null Het
Crcp T C 5: 130,088,699 (GRCm39) probably benign Het
Creb5 G A 6: 53,670,909 (GRCm39) S304N probably damaging Het
Csgalnact1 C A 8: 68,854,144 (GRCm39) G219V probably damaging Het
Dnah5 A G 15: 28,219,296 (GRCm39) D38G probably benign Het
Fam171a1 A G 2: 3,224,527 (GRCm39) I293V possibly damaging Het
Fbxw10 T C 11: 62,748,561 (GRCm39) V396A possibly damaging Het
Gm10340 G A 14: 14,832,274 (GRCm39) probably benign Het
Grik3 A G 4: 125,544,310 (GRCm39) T344A probably benign Het
Itga7 T C 10: 128,769,958 (GRCm39) F34S probably damaging Het
Musk T C 4: 58,353,936 (GRCm39) probably benign Het
Neb G T 2: 52,182,831 (GRCm39) N1038K probably damaging Het
Nf1 T C 11: 79,426,493 (GRCm39) Y1636H probably damaging Het
Ngef G T 1: 87,406,872 (GRCm39) T632K possibly damaging Het
Nme1nme2 A G 11: 93,846,400 (GRCm39) V16A probably damaging Het
Nts A G 10: 102,326,108 (GRCm39) probably benign Het
Olfml2b A G 1: 170,509,743 (GRCm39) D697G probably damaging Het
Or5ac23 A T 16: 59,149,088 (GRCm39) H261Q probably benign Het
Or5m8 T C 2: 85,822,376 (GRCm39) F72L probably benign Het
Or9i1 T A 19: 13,839,663 (GRCm39) C169S probably damaging Het
Otof T C 5: 30,534,026 (GRCm39) R1428G probably damaging Het
Pgghg T C 7: 140,525,633 (GRCm39) S479P Het
Rtn4 T A 11: 29,683,801 (GRCm39) I1031N probably damaging Het
Rxfp2 A G 5: 149,987,151 (GRCm39) E344G probably benign Het
Scel A G 14: 103,774,444 (GRCm39) R89G possibly damaging Het
Sirt4 T C 5: 115,621,055 (GRCm39) E39G probably benign Het
Slc6a12 T A 6: 121,331,334 (GRCm39) probably null Het
Snapc3 C A 4: 83,368,333 (GRCm39) H277N probably benign Het
Susd2 A G 10: 75,473,333 (GRCm39) probably null Het
Tagap1 T C 17: 7,223,826 (GRCm39) Q290R probably benign Het
Tenm3 A T 8: 48,732,233 (GRCm39) probably benign Het
Tmem54 A T 4: 129,002,073 (GRCm39) H40L probably damaging Het
Tnks1bp1 T C 2: 84,889,721 (GRCm39) S683P probably damaging Het
Tnpo2 A G 8: 85,777,131 (GRCm39) D547G probably benign Het
Tpd52l2 G A 2: 181,141,667 (GRCm39) V17M probably benign Het
Trip11 T A 12: 101,861,942 (GRCm39) T208S probably benign Het
Ttc17 C A 2: 94,194,721 (GRCm39) D551Y probably damaging Het
Ttll12 A T 15: 83,471,302 (GRCm39) W222R probably damaging Het
Xkr8 A T 4: 132,455,512 (GRCm39) I287N probably damaging Het
Zdhhc2 G T 8: 40,926,066 (GRCm39) G354C probably null Het
Zfp13 C T 17: 23,795,072 (GRCm39) A493T probably benign Het
Other mutations in Rnaseh2b
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01308:Rnaseh2b APN 14 62,602,706 (GRCm39) critical splice acceptor site probably null
R1268:Rnaseh2b UTSW 14 62,609,904 (GRCm39) missense possibly damaging 0.83
R1698:Rnaseh2b UTSW 14 62,591,081 (GRCm39) missense probably benign 0.02
R2138:Rnaseh2b UTSW 14 62,598,794 (GRCm39) missense probably benign
R2304:Rnaseh2b UTSW 14 62,598,838 (GRCm39) missense probably damaging 1.00
R3896:Rnaseh2b UTSW 14 62,597,906 (GRCm39) splice site probably benign
R4717:Rnaseh2b UTSW 14 62,591,075 (GRCm39) missense probably damaging 1.00
R5160:Rnaseh2b UTSW 14 62,590,980 (GRCm39) nonsense probably null
R6360:Rnaseh2b UTSW 14 62,598,868 (GRCm39) missense probably damaging 0.98
R8029:Rnaseh2b UTSW 14 62,590,997 (GRCm39) missense possibly damaging 0.92
R8401:Rnaseh2b UTSW 14 62,607,938 (GRCm39) missense probably benign 0.10
R8870:Rnaseh2b UTSW 14 62,569,617 (GRCm39) missense probably damaging 1.00
R9433:Rnaseh2b UTSW 14 62,602,722 (GRCm39) missense probably benign 0.02
R9570:Rnaseh2b UTSW 14 62,597,978 (GRCm39) critical splice donor site probably null
Posted On 2015-04-16