Incidental Mutation 'IGL02477:Elp3'
ID |
295003 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Elp3
|
Ensembl Gene |
ENSMUSG00000022031 |
Gene Name |
elongator acetyltransferase complex subunit 3 |
Synonyms |
KAT9, 2610507P14Rik |
Accession Numbers |
|
Essential gene? |
Probably essential
(E-score: 0.957)
|
Stock # |
IGL02477
|
Quality Score |
|
Status
|
|
Chromosome |
14 |
Chromosomal Location |
65767898-65830524 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 65800760 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Threonine to Alanine
at position 283
(T283A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000153462
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000022609]
[ENSMUST00000224743]
[ENSMUST00000225355]
|
AlphaFold |
Q9CZX0 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000022609
AA Change: T302A
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000022609 Gene: ENSMUSG00000022031 AA Change: T302A
Domain | Start | End | E-Value | Type |
Elp3
|
108 |
370 |
1.36e-37 |
SMART |
Blast:Elp3
|
387 |
431 |
2e-19 |
BLAST |
Pfam:Acetyltransf_1
|
460 |
555 |
1.1e-6 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000224743
AA Change: T283A
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000225355
AA Change: T283A
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] ELP3 is the catalytic subunit of the histone acetyltransferase elongator complex, which contributes to transcript elongation and also regulates the maturation of projection neurons (Creppe et al., 2009 [PubMed 19185337]).[supplied by OMIM, Apr 2009] PHENOTYPE: Embryos homozygous for a null gene trap mutation show severe growth retardation and die prior to E12.5. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 42 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4921539E11Rik |
T |
A |
4: 103,127,943 (GRCm39) |
I61F |
probably benign |
Het |
Abr |
T |
C |
11: 76,352,186 (GRCm39) |
K280E |
probably damaging |
Het |
Acaca |
T |
C |
11: 84,197,994 (GRCm39) |
|
probably benign |
Het |
Cep131 |
C |
T |
11: 119,961,406 (GRCm39) |
V582I |
probably damaging |
Het |
Colec12 |
A |
G |
18: 9,859,858 (GRCm39) |
N613D |
unknown |
Het |
Cyp4f39 |
A |
G |
17: 32,708,619 (GRCm39) |
T389A |
probably benign |
Het |
D630003M21Rik |
T |
C |
2: 158,059,408 (GRCm39) |
N164S |
probably benign |
Het |
Eef1akmt2 |
A |
T |
7: 132,452,318 (GRCm39) |
|
probably null |
Het |
Fads3 |
C |
A |
19: 10,033,806 (GRCm39) |
P397Q |
probably damaging |
Het |
Fam171a1 |
T |
C |
2: 3,203,612 (GRCm39) |
V198A |
possibly damaging |
Het |
Fam171a2 |
T |
C |
11: 102,330,854 (GRCm39) |
I208M |
probably benign |
Het |
Fbxw17 |
G |
A |
13: 50,577,853 (GRCm39) |
V119M |
possibly damaging |
Het |
Gtf2ird1 |
G |
A |
5: 134,408,832 (GRCm39) |
T140M |
probably damaging |
Het |
Hspa14 |
C |
T |
2: 3,497,661 (GRCm39) |
S277N |
probably damaging |
Het |
Hspg2 |
C |
T |
4: 137,271,823 (GRCm39) |
|
probably benign |
Het |
Ing2 |
G |
T |
8: 48,122,303 (GRCm39) |
R82S |
possibly damaging |
Het |
Kat6a |
A |
G |
8: 23,419,316 (GRCm39) |
Y693C |
probably damaging |
Het |
Kcna7 |
A |
G |
7: 45,059,047 (GRCm39) |
M445V |
probably benign |
Het |
Lifr |
T |
G |
15: 7,216,404 (GRCm39) |
I793S |
probably damaging |
Het |
Lrrd1 |
T |
A |
5: 3,915,770 (GRCm39) |
M789K |
probably benign |
Het |
Myom3 |
T |
A |
4: 135,506,679 (GRCm39) |
L484Q |
probably benign |
Het |
Nav2 |
T |
A |
7: 49,232,623 (GRCm39) |
M1860K |
probably damaging |
Het |
Nipbl |
C |
T |
15: 8,353,131 (GRCm39) |
|
probably null |
Het |
Nsun7 |
T |
A |
5: 66,433,992 (GRCm39) |
I214K |
probably damaging |
Het |
Or5k17 |
T |
C |
16: 58,746,126 (GRCm39) |
I269M |
probably benign |
Het |
Or8c20 |
C |
T |
9: 38,260,421 (GRCm39) |
S8L |
probably benign |
Het |
Osm |
T |
A |
11: 4,189,604 (GRCm39) |
N129K |
probably damaging |
Het |
Plce1 |
C |
T |
19: 38,707,997 (GRCm39) |
|
probably benign |
Het |
Plch1 |
A |
G |
3: 63,660,714 (GRCm39) |
F302L |
probably damaging |
Het |
Pld2 |
T |
C |
11: 70,431,751 (GRCm39) |
V27A |
possibly damaging |
Het |
Prex2 |
A |
G |
1: 11,274,378 (GRCm39) |
D1350G |
probably benign |
Het |
Psme4 |
T |
A |
11: 30,792,083 (GRCm39) |
V1190D |
probably damaging |
Het |
Sema3g |
G |
T |
14: 30,949,823 (GRCm39) |
R668L |
probably damaging |
Het |
Sprr2f |
T |
A |
3: 92,273,204 (GRCm39) |
M1K |
probably null |
Het |
Sult6b2 |
G |
A |
6: 142,747,447 (GRCm39) |
P101S |
probably damaging |
Het |
Trem3 |
G |
A |
17: 48,556,864 (GRCm39) |
V112I |
probably benign |
Het |
Ttll9 |
T |
A |
2: 152,842,117 (GRCm39) |
F324I |
possibly damaging |
Het |
Ttn |
T |
A |
2: 76,557,104 (GRCm39) |
D29967V |
probably damaging |
Het |
Ubr4 |
A |
G |
4: 139,163,516 (GRCm39) |
K2639E |
probably damaging |
Het |
Vwce |
T |
C |
19: 10,641,982 (GRCm39) |
|
probably null |
Het |
Zbtb14 |
T |
A |
17: 69,694,690 (GRCm39) |
D129E |
probably benign |
Het |
Zmym6 |
C |
T |
4: 126,972,295 (GRCm39) |
Q16* |
probably null |
Het |
|
Other mutations in Elp3 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
R0052:Elp3
|
UTSW |
14 |
65,768,975 (GRCm39) |
makesense |
probably null |
|
R0333:Elp3
|
UTSW |
14 |
65,828,042 (GRCm39) |
missense |
probably benign |
0.05 |
R0513:Elp3
|
UTSW |
14 |
65,800,695 (GRCm39) |
splice site |
probably null |
|
R0980:Elp3
|
UTSW |
14 |
65,815,402 (GRCm39) |
missense |
probably damaging |
1.00 |
R1137:Elp3
|
UTSW |
14 |
65,785,370 (GRCm39) |
missense |
probably damaging |
0.99 |
R1259:Elp3
|
UTSW |
14 |
65,785,388 (GRCm39) |
missense |
probably damaging |
0.96 |
R1378:Elp3
|
UTSW |
14 |
65,830,380 (GRCm39) |
missense |
probably benign |
|
R1722:Elp3
|
UTSW |
14 |
65,788,846 (GRCm39) |
missense |
probably benign |
0.02 |
R1789:Elp3
|
UTSW |
14 |
65,785,368 (GRCm39) |
missense |
probably damaging |
1.00 |
R3843:Elp3
|
UTSW |
14 |
65,802,932 (GRCm39) |
splice site |
probably null |
|
R4125:Elp3
|
UTSW |
14 |
65,797,630 (GRCm39) |
missense |
possibly damaging |
0.64 |
R4196:Elp3
|
UTSW |
14 |
65,785,451 (GRCm39) |
missense |
probably damaging |
1.00 |
R4400:Elp3
|
UTSW |
14 |
65,785,539 (GRCm39) |
missense |
possibly damaging |
0.89 |
R4420:Elp3
|
UTSW |
14 |
65,818,240 (GRCm39) |
missense |
probably damaging |
1.00 |
R4516:Elp3
|
UTSW |
14 |
65,785,326 (GRCm39) |
missense |
possibly damaging |
0.46 |
R4764:Elp3
|
UTSW |
14 |
65,820,378 (GRCm39) |
missense |
probably damaging |
1.00 |
R4838:Elp3
|
UTSW |
14 |
65,785,313 (GRCm39) |
critical splice donor site |
probably null |
|
R5052:Elp3
|
UTSW |
14 |
65,815,389 (GRCm39) |
missense |
probably damaging |
1.00 |
R5111:Elp3
|
UTSW |
14 |
65,797,685 (GRCm39) |
missense |
probably damaging |
1.00 |
R5665:Elp3
|
UTSW |
14 |
65,788,851 (GRCm39) |
missense |
possibly damaging |
0.80 |
R5702:Elp3
|
UTSW |
14 |
65,815,431 (GRCm39) |
missense |
probably damaging |
1.00 |
R5754:Elp3
|
UTSW |
14 |
65,785,439 (GRCm39) |
missense |
probably damaging |
1.00 |
R5927:Elp3
|
UTSW |
14 |
65,819,626 (GRCm39) |
missense |
probably damaging |
1.00 |
R5999:Elp3
|
UTSW |
14 |
65,768,989 (GRCm39) |
missense |
probably benign |
0.01 |
R6378:Elp3
|
UTSW |
14 |
65,830,420 (GRCm39) |
nonsense |
probably null |
|
R6384:Elp3
|
UTSW |
14 |
65,797,660 (GRCm39) |
missense |
probably damaging |
1.00 |
R6601:Elp3
|
UTSW |
14 |
65,784,488 (GRCm39) |
makesense |
probably null |
|
R7263:Elp3
|
UTSW |
14 |
65,802,782 (GRCm39) |
missense |
probably damaging |
0.98 |
R7857:Elp3
|
UTSW |
14 |
65,800,759 (GRCm39) |
missense |
probably benign |
0.14 |
R8504:Elp3
|
UTSW |
14 |
65,785,360 (GRCm39) |
missense |
probably benign |
0.03 |
R8789:Elp3
|
UTSW |
14 |
65,802,870 (GRCm39) |
missense |
probably damaging |
1.00 |
R8853:Elp3
|
UTSW |
14 |
65,815,390 (GRCm39) |
missense |
probably benign |
0.31 |
R9056:Elp3
|
UTSW |
14 |
65,797,582 (GRCm39) |
missense |
probably damaging |
0.99 |
R9234:Elp3
|
UTSW |
14 |
65,788,920 (GRCm39) |
missense |
probably damaging |
1.00 |
R9311:Elp3
|
UTSW |
14 |
65,823,788 (GRCm39) |
missense |
probably benign |
0.02 |
R9551:Elp3
|
UTSW |
14 |
65,797,634 (GRCm39) |
missense |
probably benign |
|
|
Posted On |
2015-04-16 |