Incidental Mutation 'IGL02488:Fcna'
ID295534
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Fcna
Ensembl Gene ENSMUSG00000026938
Gene Nameficolin A
SynonymsFcn1, ficolin A
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL02488
Quality Score
Status
Chromosome2
Chromosomal Location25624666-25628030 bp(-) (GRCm38)
Type of Mutationcritical splice donor site (2 bp from exon)
DNA Base Change (assembly) A to T at 25625211 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000028307 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000028307] [ENSMUST00000142087]
Predicted Effect probably null
Transcript: ENSMUST00000028307
SMART Domains Protein: ENSMUSP00000028307
Gene: ENSMUSG00000026938

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:Collagen 48 108 2e-10 PFAM
FBG 121 334 2.18e-110 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000028308
SMART Domains Protein: ENSMUSP00000028308
Gene: ENSMUSG00000026939

DomainStartEndE-ValueType
Pfam:TMEM141 6 94 1.5e-41 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000127642
Predicted Effect noncoding transcript
Transcript: ENSMUST00000128149
Predicted Effect noncoding transcript
Transcript: ENSMUST00000132348
Predicted Effect noncoding transcript
Transcript: ENSMUST00000136952
Predicted Effect probably benign
Transcript: ENSMUST00000142087
SMART Domains Protein: ENSMUSP00000121862
Gene: ENSMUSG00000026939

DomainStartEndE-ValueType
Pfam:TMEM141 2 97 1e-43 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000142371
Predicted Effect noncoding transcript
Transcript: ENSMUST00000150165
Predicted Effect noncoding transcript
Transcript: ENSMUST00000155684
Predicted Effect noncoding transcript
Transcript: ENSMUST00000155893
Predicted Effect noncoding transcript
Transcript: ENSMUST00000163217
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit normal collagen antibody-induced arthritis. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 36 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam5 C T 8: 24,792,006 D417N probably damaging Het
Akr1d1 A T 6: 37,567,160 E324D probably benign Het
Ankrd34a A G 3: 96,598,913 I478V probably benign Het
C8b A G 4: 104,804,081 H498R probably benign Het
Cct6a T G 5: 129,789,821 probably benign Het
Enpp7 C A 11: 118,988,814 T98N probably damaging Het
Gtdc1 A G 2: 44,825,439 Y31H probably benign Het
Gzme A T 14: 56,118,392 N154K probably benign Het
Hectd4 T C 5: 121,292,087 V849A probably benign Het
Hps1 C T 19: 42,757,788 probably benign Het
Incenp A T 19: 9,893,407 I286N unknown Het
Matn1 G T 4: 130,944,493 V24F probably benign Het
Mcm3ap A G 10: 76,499,649 T1302A probably damaging Het
Megf10 A G 18: 57,292,632 Y1030C probably damaging Het
Mpdu1 T C 11: 69,658,609 T87A probably damaging Het
Olfr347 T A 2: 36,734,350 S10T probably benign Het
Olfr648 T A 7: 104,180,271 I46F possibly damaging Het
Pde6h A G 6: 136,963,266 probably null Het
Pkhd1l1 A G 15: 44,558,597 I3088V probably benign Het
Plec G T 15: 76,179,159 T2259K possibly damaging Het
Ptch2 C T 4: 117,110,396 R754C probably damaging Het
Ptpn12 T C 5: 21,022,062 T81A possibly damaging Het
Sars2 C T 7: 28,742,160 R49* probably null Het
Scyl1 G T 19: 5,770,313 Y164* probably null Het
Smarcd1 T C 15: 99,711,201 C419R possibly damaging Het
Syne2 C A 12: 75,965,738 R2568S probably benign Het
Tap2 A G 17: 34,214,642 probably benign Het
Thrb T A 14: 18,033,455 I406K probably damaging Het
Tnn T A 1: 160,140,593 I410F probably benign Het
Tns2 T C 15: 102,112,743 S940P probably benign Het
Trav6-2 A G 14: 52,667,786 K88R probably benign Het
Ttbk2 T C 2: 120,755,871 M386V probably benign Het
Vldlr A G 19: 27,238,275 E224G probably damaging Het
Vmn1r46 T A 6: 89,976,981 C271S probably benign Het
Zfhx2 T C 14: 55,065,103 E1808G possibly damaging Het
Zfp385a A G 15: 103,320,306 I42T probably damaging Het
Other mutations in Fcna
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01945:Fcna APN 2 25627835 start codon destroyed probably null 0.53
IGL02479:Fcna APN 2 25625260 missense probably benign 0.02
IGL02984:Fcna UTSW 2 25630681 unclassified probably benign
IGL02988:Fcna UTSW 2 25630681 unclassified probably benign
IGL02991:Fcna UTSW 2 25630681 unclassified probably benign
IGL03014:Fcna UTSW 2 25630681 unclassified probably benign
IGL03046:Fcna UTSW 2 25630681 unclassified probably benign
IGL03048:Fcna UTSW 2 25630681 unclassified probably benign
IGL03052:Fcna UTSW 2 25630681 unclassified probably benign
IGL03055:Fcna UTSW 2 25630681 unclassified probably benign
IGL03138:Fcna UTSW 2 25630681 unclassified probably benign
R0318:Fcna UTSW 2 25625059 missense probably benign
R0455:Fcna UTSW 2 25625508 missense probably damaging 1.00
R2212:Fcna UTSW 2 25627493 missense probably damaging 1.00
R3413:Fcna UTSW 2 25627493 missense probably damaging 1.00
R3414:Fcna UTSW 2 25627493 missense probably damaging 1.00
R3854:Fcna UTSW 2 25627772 missense possibly damaging 0.76
R4007:Fcna UTSW 2 25626006 splice site probably null
R4448:Fcna UTSW 2 25625476 missense probably damaging 1.00
R4782:Fcna UTSW 2 25625326 missense probably damaging 1.00
R4831:Fcna UTSW 2 25625341 missense probably benign 0.11
R7255:Fcna UTSW 2 25626028 missense probably damaging 0.99
R7920:Fcna UTSW 2 25626286 missense probably benign 0.04
R8386:Fcna UTSW 2 25626015 nonsense probably null
R8417:Fcna UTSW 2 25624851 missense probably damaging 1.00
Posted On2015-04-16