Incidental Mutation 'IGL02496:Tex9'
ID 295864
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tex9
Ensembl Gene ENSMUSG00000090626
Gene Name testis expressed gene 9
Synonyms tsec-1
Accession Numbers
Essential gene? Probably non essential (E-score: 0.069) question?
Stock # IGL02496
Quality Score
Status
Chromosome 9
Chromosomal Location 72357676-72399494 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 72389774 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamine to Leucine at position 112 (Q112L)
Ref Sequence ENSEMBL: ENSMUSP00000139212 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000085358] [ENSMUST00000183574] [ENSMUST00000183856] [ENSMUST00000184125] [ENSMUST00000184312] [ENSMUST00000184557] [ENSMUST00000184831] [ENSMUST00000185151]
AlphaFold Q9D845
Predicted Effect probably benign
Transcript: ENSMUST00000085358
SMART Domains Protein: ENSMUSP00000082467
Gene: ENSMUSG00000090626

DomainStartEndE-ValueType
coiled coil region 23 63 N/A INTRINSIC
coiled coil region 186 344 N/A INTRINSIC
Predicted Effect unknown
Transcript: ENSMUST00000183428
AA Change: Q63L
Predicted Effect unknown
Transcript: ENSMUST00000183501
AA Change: Q31L
Predicted Effect noncoding transcript
Transcript: ENSMUST00000183551
Predicted Effect probably benign
Transcript: ENSMUST00000183574
AA Change: Q112L

PolyPhen 2 Score 0.009 (Sensitivity: 0.96; Specificity: 0.77)
SMART Domains Protein: ENSMUSP00000139386
Gene: ENSMUSG00000090626
AA Change: Q112L

DomainStartEndE-ValueType
coiled coil region 23 63 N/A INTRINSIC
coiled coil region 186 208 N/A INTRINSIC
coiled coil region 231 286 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000183856
AA Change: Q112L

PolyPhen 2 Score 0.082 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000139247
Gene: ENSMUSG00000090626
AA Change: Q112L

DomainStartEndE-ValueType
coiled coil region 23 63 N/A INTRINSIC
coiled coil region 186 328 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000184066
Predicted Effect probably benign
Transcript: ENSMUST00000184125
AA Change: Q112L

PolyPhen 2 Score 0.137 (Sensitivity: 0.92; Specificity: 0.86)
SMART Domains Protein: ENSMUSP00000139026
Gene: ENSMUSG00000090626
AA Change: Q112L

DomainStartEndE-ValueType
coiled coil region 23 63 N/A INTRINSIC
coiled coil region 186 344 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000184312
SMART Domains Protein: ENSMUSP00000138844
Gene: ENSMUSG00000090626

DomainStartEndE-ValueType
coiled coil region 23 63 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000184557
AA Change: Q112L

PolyPhen 2 Score 0.253 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000139212
Gene: ENSMUSG00000090626
AA Change: Q112L

DomainStartEndE-ValueType
coiled coil region 23 63 N/A INTRINSIC
coiled coil region 186 280 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000184734
Predicted Effect noncoding transcript
Transcript: ENSMUST00000185106
Predicted Effect noncoding transcript
Transcript: ENSMUST00000184624
Predicted Effect probably benign
Transcript: ENSMUST00000184831
SMART Domains Protein: ENSMUSP00000138999
Gene: ENSMUSG00000090626

DomainStartEndE-ValueType
coiled coil region 1 159 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000185151
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 70 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca12 T G 1: 71,327,712 (GRCm39) H1456P possibly damaging Het
Abcg1 C A 17: 31,324,578 (GRCm39) H274Q probably damaging Het
Adamts4 G A 1: 171,078,512 (GRCm39) R44Q probably benign Het
Amigo2 A T 15: 97,143,494 (GRCm39) C309* probably null Het
Ccdc88c A C 12: 100,919,552 (GRCm39) S446A probably benign Het
Cd9 A T 6: 125,449,458 (GRCm39) V28E probably damaging Het
Cops2 A T 2: 125,678,163 (GRCm39) probably benign Het
Csn1s1 C T 5: 87,825,453 (GRCm39) probably benign Het
Cul9 G T 17: 46,851,302 (GRCm39) R373S possibly damaging Het
D630045J12Rik G T 6: 38,126,640 (GRCm39) H1457N probably damaging Het
Dennd2b C A 7: 109,155,442 (GRCm39) R436L possibly damaging Het
Dnah9 A G 11: 65,920,189 (GRCm39) S2235P probably damaging Het
Efr3b C T 12: 4,033,391 (GRCm39) V139I probably benign Het
Fbxo10 A T 4: 45,043,883 (GRCm39) W647R probably damaging Het
Flnb T A 14: 7,930,919 (GRCm38) probably benign Het
Flnc G T 6: 29,440,684 (GRCm39) V301L probably damaging Het
Hfm1 T C 5: 107,049,627 (GRCm39) S445G probably benign Het
Hif3a A G 7: 16,773,603 (GRCm39) probably benign Het
Hsd17b4 T C 18: 50,288,220 (GRCm39) Y217H probably damaging Het
Iba57 T C 11: 59,049,772 (GRCm39) T192A probably benign Het
Igkv5-48 A T 6: 69,703,671 (GRCm39) I78N probably damaging Het
Inhbe A T 10: 127,186,797 (GRCm39) W128R probably damaging Het
Ism1 T C 2: 139,599,121 (GRCm39) C365R probably damaging Het
Kif19a A T 11: 114,670,470 (GRCm39) T127S probably damaging Het
Kmt2d C A 15: 98,755,439 (GRCm39) probably benign Het
Mmp20 A G 9: 7,654,042 (GRCm39) R321G probably damaging Het
Msl2 T C 9: 100,977,854 (GRCm39) M76T possibly damaging Het
Nme9 T C 9: 99,351,684 (GRCm39) C223R probably damaging Het
Nucb1 G T 7: 45,144,467 (GRCm39) probably benign Het
Ocrl G A X: 47,022,315 (GRCm39) D262N probably benign Het
Or13a18 A C 7: 140,190,081 (GRCm39) M1L probably benign Het
Or5b98 T A 19: 12,931,556 (GRCm39) I201N possibly damaging Het
Or6b1 A C 6: 42,815,738 (GRCm39) I308L probably benign Het
P4ha1 A G 10: 59,206,824 (GRCm39) probably null Het
Parp8 T C 13: 116,998,838 (GRCm39) probably benign Het
Pcdhb6 A G 18: 37,468,507 (GRCm39) D476G probably damaging Het
Pikfyve A G 1: 65,303,535 (GRCm39) E1685G possibly damaging Het
Plod2 T A 9: 92,489,147 (GRCm39) L714Q probably damaging Het
Plscr2 A G 9: 92,171,716 (GRCm39) I103V probably benign Het
Plscr3 C A 11: 69,738,209 (GRCm39) probably benign Het
Pmaip1 A G 18: 66,596,370 (GRCm39) R80G probably damaging Het
Ppm1d C T 11: 85,230,492 (GRCm39) P370L possibly damaging Het
Prr36 C A 8: 4,266,407 (GRCm39) E48* probably null Het
Ptgir G A 7: 16,641,409 (GRCm39) V234I possibly damaging Het
Ptk7 A T 17: 46,901,070 (GRCm39) V219E probably benign Het
Rab39b T A X: 74,618,609 (GRCm39) I74F probably damaging Het
Rasal2 A T 1: 156,977,449 (GRCm39) M1075K possibly damaging Het
Rpl37a G A 1: 72,750,885 (GRCm39) A20T probably null Het
Serpinb10 A C 1: 107,466,155 (GRCm39) probably null Het
Sipa1l1 T A 12: 82,471,868 (GRCm39) Y1283N probably damaging Het
Slc22a23 T A 13: 34,528,468 (GRCm39) I105F possibly damaging Het
Slc25a20 T A 9: 108,559,599 (GRCm39) I221N probably damaging Het
Smarcal1 A T 1: 72,659,247 (GRCm39) H691L probably damaging Het
Smo A C 6: 29,758,480 (GRCm39) T542P probably damaging Het
Spats2 T A 15: 99,071,329 (GRCm39) I51N probably damaging Het
Spon1 G T 7: 113,635,897 (GRCm39) V704L probably benign Het
Tgfbr2 T C 9: 115,919,486 (GRCm39) E580G probably benign Het
Top2b T A 14: 16,387,335 (GRCm38) V141E probably benign Het
Trhde A T 10: 114,636,466 (GRCm39) L247* probably null Het
Umodl1 G T 17: 31,217,628 (GRCm39) V1145F probably damaging Het
Vasp C A 7: 18,992,748 (GRCm39) probably benign Het
Vmn1r8 G T 6: 57,013,556 (GRCm39) L202F probably damaging Het
Vmn2r111 T C 17: 22,787,837 (GRCm39) T505A probably benign Het
Wdr27 A G 17: 15,112,693 (GRCm39) probably benign Het
Wfdc1 T G 8: 120,406,909 (GRCm39) V109G probably damaging Het
Zan C A 5: 137,463,056 (GRCm39) E708* probably null Het
Zbtb1 T A 12: 76,432,169 (GRCm39) F52I possibly damaging Het
Zfp236 A G 18: 82,648,117 (GRCm39) S1015P probably damaging Het
Zfp532 T C 18: 65,757,113 (GRCm39) S349P probably damaging Het
Znfx1 A T 2: 166,889,550 (GRCm39) C731S possibly damaging Het
Other mutations in Tex9
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00467:Tex9 APN 9 72,385,117 (GRCm39) missense probably benign 0.32
IGL01109:Tex9 APN 9 72,395,349 (GRCm39) missense probably damaging 1.00
IGL01373:Tex9 APN 9 72,388,036 (GRCm39) missense possibly damaging 0.78
IGL02569:Tex9 APN 9 72,385,645 (GRCm39) missense probably damaging 1.00
barbacoa UTSW 9 72,394,060 (GRCm39) critical splice donor site probably null
R0068:Tex9 UTSW 9 72,394,051 (GRCm39) splice site probably benign
R0481:Tex9 UTSW 9 72,385,678 (GRCm39) nonsense probably null
R0628:Tex9 UTSW 9 72,399,233 (GRCm39) start codon destroyed probably null 0.99
R0962:Tex9 UTSW 9 72,391,374 (GRCm39) missense probably benign
R2212:Tex9 UTSW 9 72,385,040 (GRCm39) missense possibly damaging 0.89
R3412:Tex9 UTSW 9 72,385,040 (GRCm39) missense possibly damaging 0.89
R4373:Tex9 UTSW 9 72,387,877 (GRCm39) critical splice donor site probably null
R4972:Tex9 UTSW 9 72,385,620 (GRCm39) critical splice donor site probably null
R5323:Tex9 UTSW 9 72,385,187 (GRCm39) missense probably damaging 1.00
R5401:Tex9 UTSW 9 72,394,060 (GRCm39) critical splice donor site probably null
R6149:Tex9 UTSW 9 72,369,282 (GRCm39) splice site probably null
R7396:Tex9 UTSW 9 72,388,072 (GRCm39) splice site probably null
R7412:Tex9 UTSW 9 72,394,060 (GRCm39) critical splice donor site probably null
R8198:Tex9 UTSW 9 72,387,940 (GRCm39) start gained probably benign
R8745:Tex9 UTSW 9 72,389,778 (GRCm39) missense probably benign 0.00
R9767:Tex9 UTSW 9 72,368,518 (GRCm39) nonsense probably null
X0024:Tex9 UTSW 9 72,387,956 (GRCm39) missense probably damaging 1.00
Posted On 2015-04-16