Incidental Mutation 'IGL02552:Tmem208'
ID 298170
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tmem208
Ensembl Gene ENSMUSG00000014856
Gene Name transmembrane protein 208
Synonyms 2610030K20Rik, 1700006C06Rik, Hspc171
Accession Numbers
Essential gene? Probably essential (E-score: 0.820) question?
Stock # IGL02552
Quality Score
Status
Chromosome 8
Chromosomal Location 106052986-106061851 bp(+) (GRCm39)
Type of Mutation splice site (5 bp from exon)
DNA Base Change (assembly) G to A at 106055329 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000015000 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000014922] [ENSMUST00000015000] [ENSMUST00000070508] [ENSMUST00000098453] [ENSMUST00000109372] [ENSMUST00000126705] [ENSMUST00000153146] [ENSMUST00000210801] [ENSMUST00000211199] [ENSMUST00000209964] [ENSMUST00000210412]
AlphaFold Q9CR96
Predicted Effect probably benign
Transcript: ENSMUST00000014922
SMART Domains Protein: ENSMUSP00000014922
Gene: ENSMUSG00000014778

DomainStartEndE-ValueType
PDB:3DAD|B 1 339 N/A PDB
Blast:Drf_GBD 85 216 1e-48 BLAST
SCOP:d1ee4a_ 120 240 4e-4 SMART
Blast:FH2 231 318 6e-38 BLAST
low complexity region 342 357 N/A INTRINSIC
Blast:FH2 386 483 2e-10 BLAST
low complexity region 514 532 N/A INTRINSIC
low complexity region 573 643 N/A INTRINSIC
FH2 648 1100 3.16e-121 SMART
low complexity region 1119 1130 N/A INTRINSIC
Blast:FH2 1135 1179 1e-6 BLAST
Predicted Effect probably null
Transcript: ENSMUST00000015000
SMART Domains Protein: ENSMUSP00000015000
Gene: ENSMUSG00000014856

DomainStartEndE-ValueType
Pfam:DUF788 7 171 1.1e-53 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000070508
SMART Domains Protein: ENSMUSP00000063248
Gene: ENSMUSG00000041679

DomainStartEndE-ValueType
LRR 42 67 7.15e-2 SMART
LRR 68 93 1.92e-2 SMART
LRR 94 119 1.23e0 SMART
LRR 120 145 1.56e2 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000098453
SMART Domains Protein: ENSMUSP00000096052
Gene: ENSMUSG00000014856

DomainStartEndE-ValueType
Pfam:DUF788 7 103 3.7e-29 PFAM
low complexity region 118 133 N/A INTRINSIC
low complexity region 135 149 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000109372
SMART Domains Protein: ENSMUSP00000104997
Gene: ENSMUSG00000014856

DomainStartEndE-ValueType
Pfam:DUF788 7 103 4.2e-30 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000126705
SMART Domains Protein: ENSMUSP00000138226
Gene: ENSMUSG00000014856

DomainStartEndE-ValueType
Pfam:DUF788 7 100 3e-29 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000153146
SMART Domains Protein: ENSMUSP00000138470
Gene: ENSMUSG00000014856

DomainStartEndE-ValueType
Pfam:DUF788 7 100 3e-29 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000210801
Predicted Effect noncoding transcript
Transcript: ENSMUST00000132777
Predicted Effect noncoding transcript
Transcript: ENSMUST00000134837
Predicted Effect probably benign
Transcript: ENSMUST00000211199
Predicted Effect probably benign
Transcript: ENSMUST00000209964
Predicted Effect probably benign
Transcript: ENSMUST00000210412
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a highly conserved protein which is localized in the endoplasmic reticulum (ER). The protein is linked to autophagy and ER stress. Knockdown of this gene increased autophagy and triggered ER stress. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015]
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700006A11Rik A G 3: 124,208,145 (GRCm39) L178S probably damaging Het
Abca12 A G 1: 71,333,906 (GRCm39) Y1199H probably damaging Het
Abcc9 T C 6: 142,551,645 (GRCm39) D1221G possibly damaging Het
Apc T A 18: 34,446,035 (GRCm39) M977K possibly damaging Het
Arhgap30 T A 1: 171,235,324 (GRCm39) L566Q probably damaging Het
Arhgap40 T A 2: 158,388,721 (GRCm39) W552R probably benign Het
Astn1 C T 1: 158,332,965 (GRCm39) S349F possibly damaging Het
Bard1 T C 1: 71,104,815 (GRCm39) probably benign Het
Batf2 T A 19: 6,221,537 (GRCm39) Y116N probably benign Het
Bltp3b T A 10: 89,642,605 (GRCm39) L10* probably null Het
Cbx6 T C 15: 79,713,094 (GRCm39) H111R probably damaging Het
Cd44 T A 2: 102,679,076 (GRCm39) N242I probably benign Het
Cdnf C T 2: 3,525,012 (GRCm39) Q184* probably null Het
Chd2 C A 7: 73,097,068 (GRCm39) probably benign Het
Cmtm6 G A 9: 114,566,374 (GRCm39) V88M probably damaging Het
Col24a1 C A 3: 145,179,962 (GRCm39) S1151R possibly damaging Het
Csta2 A G 16: 36,073,459 (GRCm39) E15G probably damaging Het
Degs1l T A 1: 180,882,463 (GRCm39) V75E possibly damaging Het
Dnajc2 T C 5: 21,988,061 (GRCm39) D6G probably damaging Het
Eif3a G A 19: 60,751,664 (GRCm39) probably benign Het
Fbn1 C A 2: 125,254,633 (GRCm39) C210F possibly damaging Het
Fmn2 T A 1: 174,523,286 (GRCm39) D1380E probably damaging Het
Fry A T 5: 150,304,375 (GRCm39) K588N probably damaging Het
Gm18856 G A 13: 14,139,805 (GRCm39) probably benign Het
Gpr37 G T 6: 25,688,686 (GRCm39) T137K probably benign Het
Gzmc T C 14: 56,472,039 (GRCm39) M1V probably null Het
Htr5a T C 5: 28,047,958 (GRCm39) V171A probably benign Het
Ints6l T C X: 55,500,557 (GRCm39) probably benign Het
Kcnma1 C T 14: 23,436,327 (GRCm39) probably null Het
Krt35 C T 11: 99,983,899 (GRCm39) G367D probably benign Het
Nlrp1b C T 11: 71,063,057 (GRCm39) V668I possibly damaging Het
Nlrp1b C T 11: 71,072,878 (GRCm39) V322I possibly damaging Het
Ntf3 T C 6: 126,078,823 (GRCm39) N228D probably damaging Het
Nup133 G A 8: 124,655,994 (GRCm39) R496W possibly damaging Het
Or4c10 T C 2: 89,760,903 (GRCm39) V250A probably benign Het
Or51i1 C A 7: 103,671,463 (GRCm39) G21W probably damaging Het
Pah C T 10: 87,414,707 (GRCm39) probably benign Het
Pan2 G T 10: 128,154,896 (GRCm39) W1112L probably damaging Het
Pkn3 G A 2: 29,970,879 (GRCm39) R209Q probably damaging Het
Plaa C T 4: 94,470,717 (GRCm39) probably null Het
Qprt C T 7: 126,708,027 (GRCm39) A135T probably damaging Het
Rbbp6 T G 7: 122,582,204 (GRCm39) S108A probably damaging Het
Smg1 T A 7: 117,795,117 (GRCm39) probably benign Het
Spink5 T A 18: 44,125,235 (GRCm39) C368S possibly damaging Het
Sptan1 T A 2: 29,908,486 (GRCm39) I1734N probably damaging Het
Stk38l C T 6: 146,669,031 (GRCm39) L170F probably damaging Het
Tesmin C T 19: 3,452,483 (GRCm39) probably benign Het
Tjp1 A T 7: 64,949,530 (GRCm39) C1697* probably null Het
Tmco4 T C 4: 138,785,690 (GRCm39) S587P probably benign Het
Trim30d T C 7: 104,121,623 (GRCm39) Q224R probably damaging Het
Trpm7 T A 2: 126,682,699 (GRCm39) D390V probably damaging Het
Uba7 A G 9: 107,858,589 (GRCm39) I807V probably benign Het
Utp18 C A 11: 93,759,160 (GRCm39) C438F probably damaging Het
Vps13d T C 4: 144,899,707 (GRCm39) K191E possibly damaging Het
Wdr27 A G 17: 15,146,453 (GRCm39) S181P probably damaging Het
Zfp462 T C 4: 55,010,613 (GRCm39) Y860H probably damaging Het
Other mutations in Tmem208
AlleleSourceChrCoordTypePredicted EffectPPH Score
Agog UTSW 8 106,055,257 (GRCm39) missense probably damaging 1.00
excited UTSW 8 106,055,063 (GRCm39) missense probably damaging 1.00
R0066:Tmem208 UTSW 8 106,054,857 (GRCm39) missense probably benign 0.38
R0164:Tmem208 UTSW 8 106,061,326 (GRCm39) missense probably benign 0.01
R0164:Tmem208 UTSW 8 106,061,326 (GRCm39) missense probably benign 0.01
R0566:Tmem208 UTSW 8 106,061,475 (GRCm39) missense probably benign 0.00
R1569:Tmem208 UTSW 8 106,061,462 (GRCm39) missense possibly damaging 0.66
R1860:Tmem208 UTSW 8 106,061,438 (GRCm39) missense possibly damaging 0.66
R1861:Tmem208 UTSW 8 106,061,438 (GRCm39) missense possibly damaging 0.66
R4836:Tmem208 UTSW 8 106,055,296 (GRCm39) missense probably damaging 1.00
R5126:Tmem208 UTSW 8 106,061,282 (GRCm39) missense probably benign 0.00
R5352:Tmem208 UTSW 8 106,055,063 (GRCm39) missense probably damaging 1.00
R6862:Tmem208 UTSW 8 106,054,862 (GRCm39) critical splice donor site probably null
R7289:Tmem208 UTSW 8 106,061,418 (GRCm39) missense possibly damaging 0.66
R7784:Tmem208 UTSW 8 106,055,465 (GRCm39) missense possibly damaging 0.50
R8274:Tmem208 UTSW 8 106,055,257 (GRCm39) missense probably damaging 1.00
R9472:Tmem208 UTSW 8 106,055,027 (GRCm39) missense probably damaging 1.00
R9765:Tmem208 UTSW 8 106,061,506 (GRCm39) makesense probably null
Posted On 2015-04-16