Incidental Mutation 'IGL02556:1700017N19Rik'
ID 298525
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol 1700017N19Rik
Ensembl Gene ENSMUSG00000056912
Gene Name RIKEN cDNA 1700017N19 gene
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.073) question?
Stock # IGL02556
Quality Score
Status
Chromosome 10
Chromosomal Location 100590484-100618401 bp(+) (GRCm38)
Type of Mutation critical splice donor site (2 bp from exon)
DNA Base Change (assembly) T to G at 100610717 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000151731 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000041162] [ENSMUST00000186825] [ENSMUST00000187119] [ENSMUST00000188736] [ENSMUST00000190386] [ENSMUST00000190708] [ENSMUST00000191033] [ENSMUST00000191336] [ENSMUST00000218464]
AlphaFold A0A087WPJ1
Predicted Effect probably null
Transcript: ENSMUST00000041162
Predicted Effect probably benign
Transcript: ENSMUST00000186825
Predicted Effect probably benign
Transcript: ENSMUST00000187119
Predicted Effect probably null
Transcript: ENSMUST00000188736
Predicted Effect probably benign
Transcript: ENSMUST00000190386
Predicted Effect probably null
Transcript: ENSMUST00000190708
Predicted Effect probably null
Transcript: ENSMUST00000191033
Predicted Effect probably benign
Transcript: ENSMUST00000191336
Predicted Effect probably null
Transcript: ENSMUST00000218464
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ace A G 11: 105,972,527 (GRCm38) D376G probably damaging Het
Adgrb1 C T 15: 74,586,805 (GRCm38) T1252I probably damaging Het
Bhmt T C 13: 93,637,500 (GRCm38) probably benign Het
Ckap5 T C 2: 91,594,841 (GRCm38) probably benign Het
Clcn4 T C 7: 7,296,066 (GRCm38) T37A probably benign Het
Cnmd C T 14: 79,661,960 (GRCm38) V18I probably benign Het
Cryl1 C T 14: 57,276,021 (GRCm38) V248M probably benign Het
D830039M14Rik C T 10: 61,475,483 (GRCm38) probably benign Het
Dido1 T C 2: 180,689,335 (GRCm38) T107A possibly damaging Het
Efna5 C A 17: 62,651,028 (GRCm38) V78F probably damaging Het
Eml1 A G 12: 108,537,366 (GRCm38) I741V probably benign Het
Gfap A G 11: 102,896,954 (GRCm38) L55P probably damaging Het
Itga6 A G 2: 71,838,683 (GRCm38) I606V probably benign Het
Kif2c G T 4: 117,162,605 (GRCm38) D579E probably damaging Het
Lef1 T C 3: 131,194,793 (GRCm38) probably null Het
Lrrc1 T A 9: 77,435,122 (GRCm38) I357L probably benign Het
Lrrc37 A G 11: 103,613,283 (GRCm38) S2620P probably benign Het
Map3k20 T A 2: 72,371,895 (GRCm38) F157I probably damaging Het
Naga A T 15: 82,330,136 (GRCm38) N391K probably damaging Het
Ncaph T C 2: 127,126,105 (GRCm38) probably benign Het
Or11g2 C A 14: 50,618,728 (GRCm38) Q169K probably benign Het
Or12d13 T A 17: 37,336,996 (GRCm38) M79L probably benign Het
Or5ae1 T G 7: 84,916,359 (GRCm38) Y193* probably null Het
Or6b9 T A 7: 106,956,391 (GRCm38) I182F possibly damaging Het
Or6c2b T G 10: 129,112,035 (GRCm38) Y130S probably damaging Het
Or8g55 T A 9: 39,873,610 (GRCm38) C112S possibly damaging Het
Pappa C A 4: 65,156,626 (GRCm38) D472E possibly damaging Het
Pdxk G A 10: 78,451,485 (GRCm38) L81F probably damaging Het
Pkhd1 G T 1: 20,310,710 (GRCm38) T2635K probably damaging Het
Psmb6 A T 11: 70,526,422 (GRCm38) H99L possibly damaging Het
Ptpn6 C T 6: 124,728,660 (GRCm38) G135E probably benign Het
Ptprz1 T A 6: 22,972,845 (GRCm38) D251E probably benign Het
Ralgapa1 A G 12: 55,642,449 (GRCm38) V1955A possibly damaging Het
Rsph4a T C 10: 33,905,152 (GRCm38) probably benign Het
Sh2d4b T C 14: 40,820,743 (GRCm38) T359A probably benign Het
Sh3bp5l A G 11: 58,346,261 (GRCm38) D348G probably damaging Het
Skint5 A T 4: 113,940,735 (GRCm38) M217K probably damaging Het
Slc30a6 T C 17: 74,404,059 (GRCm38) L49P probably damaging Het
Slc8a1 C T 17: 81,648,744 (GRCm38) M288I probably benign Het
Tmem127 C A 2: 127,256,002 (GRCm38) probably null Het
Tnfrsf17 T C 16: 11,313,947 (GRCm38) probably benign Het
Trak1 A T 9: 121,448,901 (GRCm38) N341I probably damaging Het
Ubr5 A G 15: 38,002,448 (GRCm38) I1453T probably benign Het
Wdr62 T C 7: 30,245,284 (GRCm38) probably null Het
Xrn2 T C 2: 147,038,296 (GRCm38) probably benign Het
Zscan10 C T 17: 23,608,145 (GRCm38) A144V possibly damaging Het
Other mutations in 1700017N19Rik
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01565:1700017N19Rik APN 10 100,603,360 (GRCm38) missense probably damaging 1.00
IGL02159:1700017N19Rik APN 10 100,610,665 (GRCm38) missense probably damaging 1.00
IGL02629:1700017N19Rik APN 10 100,609,144 (GRCm38) splice site probably benign
IGL02692:1700017N19Rik APN 10 100,603,548 (GRCm38) missense probably benign 0.05
IGL02962:1700017N19Rik APN 10 100,610,593 (GRCm38) splice site probably null
R0145:1700017N19Rik UTSW 10 100,601,921 (GRCm38) missense probably damaging 0.96
R0402:1700017N19Rik UTSW 10 100,609,253 (GRCm38) missense probably damaging 0.99
R1514:1700017N19Rik UTSW 10 100,612,867 (GRCm38) missense probably damaging 1.00
R1519:1700017N19Rik UTSW 10 100,603,528 (GRCm38) missense probably damaging 0.98
R1680:1700017N19Rik UTSW 10 100,603,528 (GRCm38) missense probably damaging 0.98
R1686:1700017N19Rik UTSW 10 100,612,860 (GRCm38) missense probably damaging 0.97
R3951:1700017N19Rik UTSW 10 100,615,296 (GRCm38) splice site probably benign
R3952:1700017N19Rik UTSW 10 100,615,296 (GRCm38) splice site probably benign
R4423:1700017N19Rik UTSW 10 100,605,633 (GRCm38) missense probably damaging 0.99
R4905:1700017N19Rik UTSW 10 100,612,818 (GRCm38) splice site probably null
R5507:1700017N19Rik UTSW 10 100,609,233 (GRCm38) missense probably benign 0.02
R5898:1700017N19Rik UTSW 10 100,615,208 (GRCm38) missense probably benign 0.20
R5898:1700017N19Rik UTSW 10 100,612,900 (GRCm38) missense possibly damaging 0.56
R5977:1700017N19Rik UTSW 10 100,615,244 (GRCm38) missense probably damaging 0.99
R7034:1700017N19Rik UTSW 10 100,609,256 (GRCm38) critical splice donor site probably null
R7036:1700017N19Rik UTSW 10 100,609,256 (GRCm38) critical splice donor site probably null
R7394:1700017N19Rik UTSW 10 100,609,176 (GRCm38) missense probably benign 0.01
R7412:1700017N19Rik UTSW 10 100,612,829 (GRCm38) nonsense probably null
R7870:1700017N19Rik UTSW 10 100,605,643 (GRCm38) missense probably benign
R7914:1700017N19Rik UTSW 10 100,592,676 (GRCm38) missense probably benign
R8466:1700017N19Rik UTSW 10 100,602,011 (GRCm38) missense probably benign 0.00
R8558:1700017N19Rik UTSW 10 100,594,635 (GRCm38) missense probably benign 0.23
R9004:1700017N19Rik UTSW 10 100,618,335 (GRCm38) unclassified probably benign
R9105:1700017N19Rik UTSW 10 100,603,545 (GRCm38) nonsense probably null
R9641:1700017N19Rik UTSW 10 100,594,636 (GRCm38) missense possibly damaging 0.91
Z1088:1700017N19Rik UTSW 10 100,605,639 (GRCm38) missense probably damaging 1.00
Z1176:1700017N19Rik UTSW 10 100,612,429 (GRCm38) missense probably damaging 0.98
Posted On 2015-04-16