Incidental Mutation 'IGL02609:Vmn1r26'
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ID300390
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r26
Ensembl Gene ENSMUSG00000048697
Gene Namevomeronasal 1 receptor 26
SynonymsV1rc17
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.063) question?
Stock #IGL02609
Quality Score
Status
Chromosome6
Chromosomal Location58004934-58015159 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 58008875 bp
ZygosityHeterozygous
Amino Acid Change Serine to Proline at position 110 (S110P)
Ref Sequence ENSEMBL: ENSMUSP00000154463 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000049694] [ENSMUST00000228040] [ENSMUST00000228070] [ENSMUST00000228951]
Predicted Effect probably damaging
Transcript: ENSMUST00000049694
AA Change: S110P

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000052301
Gene: ENSMUSG00000048697
AA Change: S110P

DomainStartEndE-ValueType
Pfam:V1R 28 293 5.8e-55 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000228040
AA Change: S110P

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000228070
AA Change: S110P

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000228951
AA Change: S110P

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 43 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2210407C18Rik A T 11: 58,612,616 C29S probably damaging Het
A930011G23Rik A G 5: 99,233,995 probably benign Het
Adcy10 T G 1: 165,538,475 Y520* probably null Het
Agrn A T 4: 156,175,223 probably benign Het
AI661453 A T 17: 47,468,372 probably benign Het
Arhgap6 A G X: 169,178,066 probably benign Het
Asxl2 T C 12: 3,500,018 S587P probably damaging Het
B3gntl1 A G 11: 121,644,601 probably benign Het
Bahcc1 T C 11: 120,289,398 F2527L possibly damaging Het
Baz2b T A 2: 59,917,369 M1317L possibly damaging Het
Bcas3 A T 11: 85,457,894 K204I probably damaging Het
C1qtnf1 T C 11: 118,448,004 F167L probably damaging Het
Cfap58 C T 19: 47,975,502 T523M possibly damaging Het
Ddb1 T A 19: 10,622,466 C680S possibly damaging Het
Eef1d T C 15: 75,896,313 Q200R probably null Het
Gm10717 A T 9: 3,026,287 Y195F probably damaging Het
Gm28557 T A 13: 67,071,019 K214* probably null Het
Gm438 T A 4: 144,779,737 D128V probably damaging Het
Gm8229 A C 14: 44,366,625 E90D probably benign Het
Hhla1 T C 15: 65,930,614 probably benign Het
Hivep1 C T 13: 42,155,654 H457Y probably damaging Het
Htr2c T C X: 147,193,760 probably benign Het
Ifi44 A T 3: 151,732,497 S384R probably damaging Het
Impad1 T A 4: 4,767,763 R338* probably null Het
Kirrel2 T C 7: 30,448,340 T628A probably benign Het
Kmt2d T C 15: 98,851,793 probably benign Het
Larp4b T A 13: 9,170,680 I655N probably damaging Het
Lrrd1 G A 5: 3,858,803 V692I probably benign Het
Mum1 A T 10: 80,230,083 E57V probably damaging Het
Nes T C 3: 87,977,221 I929T probably benign Het
Ogfr T C 2: 180,592,515 probably benign Het
Rfx2 G T 17: 56,805,404 P43Q probably benign Het
Rnf123 G A 9: 108,068,302 R390* probably null Het
Sh3tc1 T C 5: 35,707,172 K495R probably damaging Het
Slit1 A T 19: 41,602,304 C1310S probably damaging Het
Srrm1 G A 4: 135,325,104 P658L unknown Het
Stk35 T C 2: 129,801,801 V235A probably damaging Het
Syde2 T G 3: 145,998,520 V142G probably benign Het
Tgfb3 A G 12: 86,077,839 F32L probably benign Het
Tmem35a T C X: 134,304,697 F121L probably damaging Het
Trp53bp2 T A 1: 182,453,724 D963E probably benign Het
Vpreb2 T C 16: 17,980,694 probably benign Het
Xrn2 A T 2: 147,050,025 T721S probably benign Het
Other mutations in Vmn1r26
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02517:Vmn1r26 APN 6 58009142 missense possibly damaging 0.81
R1121:Vmn1r26 UTSW 6 58008662 missense probably benign 0.43
R1881:Vmn1r26 UTSW 6 58008665 missense probably benign 0.20
R1958:Vmn1r26 UTSW 6 58008301 missense probably benign 0.01
R1978:Vmn1r26 UTSW 6 58009126 missense possibly damaging 0.83
R2106:Vmn1r26 UTSW 6 58008725 missense possibly damaging 0.69
R2117:Vmn1r26 UTSW 6 58008350 missense possibly damaging 0.65
R2323:Vmn1r26 UTSW 6 58008857 missense probably damaging 1.00
R4917:Vmn1r26 UTSW 6 58008823 missense probably damaging 0.99
R5695:Vmn1r26 UTSW 6 58008753 missense probably damaging 1.00
R6355:Vmn1r26 UTSW 6 58008551 missense probably benign 0.02
R6948:Vmn1r26 UTSW 6 58008733 missense probably damaging 0.98
R7114:Vmn1r26 UTSW 6 58008770 missense probably benign 0.02
R7977:Vmn1r26 UTSW 6 58008279 nonsense probably null
R7987:Vmn1r26 UTSW 6 58008279 nonsense probably null
R8311:Vmn1r26 UTSW 6 58008533 missense probably benign 0.39
R8442:Vmn1r26 UTSW 6 58008743 missense possibly damaging 0.95
RF020:Vmn1r26 UTSW 6 58008720 missense probably benign 0.35
Z1176:Vmn1r26 UTSW 6 58008597 missense probably damaging 1.00
Posted On2015-04-16