Incidental Mutation 'IGL02629:Clec4a1'
ID 301224
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Clec4a1
Ensembl Gene ENSMUSG00000049037
Gene Name C-type lectin domain family 4, member a1
Synonyms mDcir4
Accession Numbers
Essential gene? Probably non essential (E-score: 0.051) question?
Stock # IGL02629
Quality Score
Status
Chromosome 6
Chromosomal Location 122898807-122911578 bp(+) (GRCm39)
Type of Mutation critical splice acceptor site
DNA Base Change (assembly) A to C at 122909106 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000062441 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000060484]
AlphaFold Q80UI7
Predicted Effect probably null
Transcript: ENSMUST00000060484
SMART Domains Protein: ENSMUSP00000062441
Gene: ENSMUSG00000049037

DomainStartEndE-ValueType
low complexity region 23 35 N/A INTRINSIC
transmembrane domain 54 76 N/A INTRINSIC
CLECT 114 239 8.08e-29 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700017N19Rik T C 10: 100,445,006 (GRCm39) probably benign Het
Aadacl3 A G 4: 144,190,199 (GRCm39) I34T possibly damaging Het
Acan T A 7: 78,761,727 (GRCm39) I1979N possibly damaging Het
Ankrd27 A G 7: 35,325,121 (GRCm39) D701G probably benign Het
Arhgap31 C T 16: 38,429,526 (GRCm39) G450S probably benign Het
Braf T C 6: 39,665,233 (GRCm39) E45G possibly damaging Het
Btnl6 C T 17: 34,733,442 (GRCm39) V178M probably damaging Het
Capg A T 6: 72,532,737 (GRCm39) Q67L probably benign Het
Carmil3 A G 14: 55,736,525 (GRCm39) N663S probably damaging Het
Casz1 T A 4: 149,028,848 (GRCm39) S1098T probably benign Het
Cd55b A T 1: 130,347,535 (GRCm39) probably benign Het
Cdc45 C T 16: 18,617,479 (GRCm39) M200I probably benign Het
Cenpf A G 1: 189,384,531 (GRCm39) L2583P probably damaging Het
Corin T C 5: 72,490,016 (GRCm39) N653S probably damaging Het
Dhx36 T C 3: 62,414,155 (GRCm39) E69G probably benign Het
Dpy19l1 C A 9: 24,350,009 (GRCm39) probably benign Het
Fam184a T C 10: 53,574,907 (GRCm39) N234S possibly damaging Het
Foxg1 A G 12: 49,432,331 (GRCm39) S355G probably benign Het
Fsd1l T C 4: 53,686,417 (GRCm39) S277P probably damaging Het
Hadh T A 3: 131,029,284 (GRCm39) D245V probably damaging Het
Jag2 G A 12: 112,878,134 (GRCm39) probably benign Het
Klhl18 A T 9: 110,259,006 (GRCm39) probably benign Het
Lmx1a G T 1: 167,672,192 (GRCm39) probably benign Het
Mcoln2 A G 3: 145,875,799 (GRCm39) Y89C probably benign Het
Mug1 A T 6: 121,817,024 (GRCm39) Y31F possibly damaging Het
Ndufb5 A G 3: 32,791,348 (GRCm39) T32A probably benign Het
Nub1 C T 5: 24,908,462 (GRCm39) H404Y possibly damaging Het
Nudt6 A G 3: 37,459,320 (GRCm39) Y222H probably benign Het
Or4x6 A T 2: 89,949,201 (GRCm39) L247* probably null Het
Pla2g4c A T 7: 13,069,302 (GRCm39) R159* probably null Het
Pnpla7 A G 2: 24,940,957 (GRCm39) D1103G probably damaging Het
Pof1b T G X: 111,554,934 (GRCm39) probably benign Het
Prrg2 C T 7: 44,706,166 (GRCm39) probably null Het
Rab3gap1 A G 1: 127,837,600 (GRCm39) T221A probably benign Het
Rfx7 A G 9: 72,526,541 (GRCm39) N1244D probably damaging Het
Rnf123 G A 9: 107,945,501 (GRCm39) R390* probably null Het
Rnf123 A T 9: 107,947,988 (GRCm39) probably benign Het
Rnf44 T G 13: 54,830,875 (GRCm39) Q207P possibly damaging Het
Serpina3g A G 12: 104,207,437 (GRCm39) D200G probably damaging Het
Slc5a4a T A 10: 75,983,413 (GRCm39) S17T unknown Het
Smc4 G T 3: 68,933,206 (GRCm39) C609F probably damaging Het
Sync T C 4: 129,187,744 (GRCm39) F259L probably damaging Het
Tas2r113 T C 6: 132,870,299 (GRCm39) L109P probably damaging Het
Tjp2 C A 19: 24,099,743 (GRCm39) probably benign Het
Tmem30a C A 9: 79,683,531 (GRCm39) probably benign Het
Unc80 T C 1: 66,522,476 (GRCm39) V226A possibly damaging Het
Upk2 A T 9: 44,365,436 (GRCm39) L44Q probably damaging Het
Usp42 T C 5: 143,708,909 (GRCm39) Y203C possibly damaging Het
Vmn1r28 A T 6: 58,242,801 (GRCm39) I215F probably benign Het
Zswim2 A G 2: 83,755,553 (GRCm39) V116A possibly damaging Het
Other mutations in Clec4a1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00926:Clec4a1 APN 6 122,899,014 (GRCm39) missense possibly damaging 0.53
IGL00932:Clec4a1 APN 6 122,907,654 (GRCm39) missense probably damaging 1.00
IGL01973:Clec4a1 APN 6 122,907,680 (GRCm39) missense probably damaging 1.00
IGL01976:Clec4a1 APN 6 122,905,033 (GRCm39) splice site probably benign
IGL02009:Clec4a1 APN 6 122,909,175 (GRCm39) missense probably benign 0.09
IGL03180:Clec4a1 APN 6 122,901,777 (GRCm39) missense probably benign 0.08
R1973:Clec4a1 UTSW 6 122,901,793 (GRCm39) splice site probably null
R4582:Clec4a1 UTSW 6 122,909,150 (GRCm39) missense possibly damaging 0.58
R4758:Clec4a1 UTSW 6 122,910,825 (GRCm39) missense probably damaging 0.97
R4937:Clec4a1 UTSW 6 122,907,654 (GRCm39) missense probably damaging 1.00
R5362:Clec4a1 UTSW 6 122,909,196 (GRCm39) missense probably damaging 1.00
R6247:Clec4a1 UTSW 6 122,905,001 (GRCm39) missense probably benign 0.10
R6748:Clec4a1 UTSW 6 122,910,856 (GRCm39) missense possibly damaging 0.72
R7387:Clec4a1 UTSW 6 122,899,016 (GRCm39) missense possibly damaging 0.91
R7481:Clec4a1 UTSW 6 122,904,998 (GRCm39) missense probably damaging 1.00
R7733:Clec4a1 UTSW 6 122,909,109 (GRCm39) missense possibly damaging 0.93
R8209:Clec4a1 UTSW 6 122,907,773 (GRCm39) missense probably damaging 0.99
R8243:Clec4a1 UTSW 6 122,901,778 (GRCm39) missense possibly damaging 0.75
R8297:Clec4a1 UTSW 6 122,898,960 (GRCm39) missense probably damaging 1.00
R8371:Clec4a1 UTSW 6 122,910,882 (GRCm39) makesense probably null
Z1177:Clec4a1 UTSW 6 122,910,851 (GRCm39) missense possibly damaging 0.46
Posted On 2015-04-16