Incidental Mutation 'IGL02644:Tubgcp3'
ID301885
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tubgcp3
Ensembl Gene ENSMUSG00000000759
Gene Nametubulin, gamma complex associated protein 3
SynonymsSpc98p, GCP3
Accession Numbers
Is this an essential gene? Probably essential (E-score: 0.965) question?
Stock #IGL02644
Quality Score
Status
Chromosome8
Chromosomal Location12614277-12672248 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 12648733 bp
ZygosityHeterozygous
Amino Acid Change Aspartic acid to Glycine at position 406 (D406G)
Ref Sequence ENSEMBL: ENSMUSP00000000776 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000000776] [ENSMUST00000164774]
Predicted Effect probably damaging
Transcript: ENSMUST00000000776
AA Change: D406G

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000000776
Gene: ENSMUSG00000000759
AA Change: D406G

DomainStartEndE-ValueType
low complexity region 152 171 N/A INTRINSIC
Pfam:Spc97_Spc98 251 761 9.5e-124 PFAM
coiled coil region 787 814 N/A INTRINSIC
low complexity region 821 827 N/A INTRINSIC
low complexity region 890 903 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000164774
AA Change: T362A

PolyPhen 2 Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)
SMART Domains Protein: ENSMUSP00000127741
Gene: ENSMUSG00000000759
AA Change: T362A

DomainStartEndE-ValueType
low complexity region 152 171 N/A INTRINSIC
Pfam:Spc97_Spc98 251 361 3.5e-16 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000164861
Predicted Effect noncoding transcript
Transcript: ENSMUST00000164971
Predicted Effect noncoding transcript
Transcript: ENSMUST00000167547
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adgrl4 A T 3: 151,492,370 Y89F probably benign Het
Agl A G 3: 116,786,597 Y406H probably damaging Het
Ankhd1 G A 18: 36,578,775 probably null Het
Ankmy1 T C 1: 92,885,054 D511G probably benign Het
Arid2 T C 15: 96,368,708 Y546H probably damaging Het
Asap1 G T 15: 64,111,062 P806T probably damaging Het
Aspa T A 11: 73,322,166 T117S probably damaging Het
Atp2a3 C A 11: 72,975,339 H262N probably benign Het
Bspry A T 4: 62,496,328 H386L probably damaging Het
C1qc T C 4: 136,890,318 T156A possibly damaging Het
Copz2 A T 11: 96,853,431 probably benign Het
Cybb A G X: 9,467,156 V23A probably benign Het
D630003M21Rik T A 2: 158,216,810 D390V possibly damaging Het
Dpy19l2 G T 9: 24,658,592 P355Q probably damaging Het
Fam45a T A 19: 60,822,303 S43T possibly damaging Het
Gcn1l1 A T 5: 115,575,191 Q71L probably benign Het
Gm4788 A G 1: 139,781,167 M1T probably null Het
Gpd1l T C 9: 114,903,657 probably null Het
Hydin A G 8: 110,538,468 D2761G probably damaging Het
Ifi202b T A 1: 173,971,714 H256L probably benign Het
Igkv8-24 T C 6: 70,216,888 Y112C probably damaging Het
Lama3 G A 18: 12,525,853 R2022Q probably benign Het
Mroh4 T A 15: 74,610,375 R675S possibly damaging Het
Mtf1 T G 4: 124,820,235 C146G probably damaging Het
Nubpl A G 12: 52,271,058 D178G probably damaging Het
Olfr58 A C 9: 19,783,714 I194L probably benign Het
Pam16 A G 16: 4,616,833 S91P probably damaging Het
Pcdhac2 A G 18: 37,145,179 E404G probably benign Het
Pde7a C A 3: 19,256,867 probably benign Het
Perm1 G T 4: 156,218,586 G529V probably damaging Het
Pik3c2a T C 7: 116,372,814 T794A probably benign Het
Ppfibp1 A G 6: 147,022,440 Y722C probably damaging Het
Ppm1m A T 9: 106,196,883 I241N probably damaging Het
Psd T C 19: 46,323,395 Y282C probably damaging Het
Rpl27 T A 11: 101,445,491 probably benign Het
Scaf1 A G 7: 45,005,933 probably benign Het
Sec14l2 A T 11: 4,103,380 probably benign Het
Smchd1 T A 17: 71,360,021 probably benign Het
Sptb A T 12: 76,605,617 D1615E probably damaging Het
Stt3a A C 9: 36,752,353 C198G possibly damaging Het
Tas2r144 T C 6: 42,215,853 S176P possibly damaging Het
Tlr13 A G X: 106,156,897 D80G probably benign Het
Tmco4 A G 4: 139,010,609 probably benign Het
Tnpo2 T A 8: 85,044,480 C132S possibly damaging Het
Vmn2r125 G A 4: 156,350,999 R224Q probably benign Het
Zfp524 C A 7: 5,017,480 D2E probably damaging Het
Other mutations in Tubgcp3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00424:Tubgcp3 APN 8 12621809 missense probably benign 0.00
IGL00583:Tubgcp3 APN 8 12621906 nonsense probably null
IGL01289:Tubgcp3 APN 8 12639625 missense probably damaging 1.00
IGL01578:Tubgcp3 APN 8 12661297 splice site probably benign
IGL01716:Tubgcp3 APN 8 12641094 splice site probably benign
IGL01943:Tubgcp3 APN 8 12654301 missense probably damaging 1.00
IGL02020:Tubgcp3 APN 8 12637780 missense possibly damaging 0.46
IGL02345:Tubgcp3 APN 8 12625056 missense probably damaging 1.00
IGL02555:Tubgcp3 APN 8 12639595 missense probably benign 0.36
IGL02976:Tubgcp3 APN 8 12632300 missense probably damaging 1.00
IGL03240:Tubgcp3 APN 8 12649797 missense probably benign 0.07
IGL03287:Tubgcp3 APN 8 12639630 missense possibly damaging 0.77
Tinky_winky UTSW 8 12650171 missense probably damaging 1.00
R0145:Tubgcp3 UTSW 8 12657561 missense probably benign 0.01
R0379:Tubgcp3 UTSW 8 12641116 missense probably damaging 0.97
R0558:Tubgcp3 UTSW 8 12653462 missense probably benign 0.00
R1490:Tubgcp3 UTSW 8 12639550 missense probably damaging 1.00
R1709:Tubgcp3 UTSW 8 12639532 nonsense probably null
R1768:Tubgcp3 UTSW 8 12649686 unclassified probably benign
R1921:Tubgcp3 UTSW 8 12621932 nonsense probably null
R1928:Tubgcp3 UTSW 8 12663988 missense possibly damaging 0.94
R2161:Tubgcp3 UTSW 8 12632292 missense probably benign 0.22
R3120:Tubgcp3 UTSW 8 12657626 missense possibly damaging 0.51
R3434:Tubgcp3 UTSW 8 12658381 splice site probably null
R4011:Tubgcp3 UTSW 8 12639634 nonsense probably null
R4162:Tubgcp3 UTSW 8 12639547 missense possibly damaging 0.46
R4300:Tubgcp3 UTSW 8 12657600 missense probably damaging 0.99
R4350:Tubgcp3 UTSW 8 12641117 missense probably benign 0.19
R4529:Tubgcp3 UTSW 8 12663932 missense probably damaging 0.98
R4530:Tubgcp3 UTSW 8 12663932 missense probably damaging 0.98
R4531:Tubgcp3 UTSW 8 12663932 missense probably damaging 0.98
R4676:Tubgcp3 UTSW 8 12650171 missense probably damaging 1.00
R4730:Tubgcp3 UTSW 8 12657654 missense probably benign 0.03
R4828:Tubgcp3 UTSW 8 12671987 missense probably benign
R4860:Tubgcp3 UTSW 8 12649722 missense probably benign 0.03
R4860:Tubgcp3 UTSW 8 12649722 missense probably benign 0.03
R5610:Tubgcp3 UTSW 8 12639577 missense probably damaging 1.00
R5625:Tubgcp3 UTSW 8 12624888 missense possibly damaging 0.46
R5650:Tubgcp3 UTSW 8 12648670 missense probably damaging 0.98
R5775:Tubgcp3 UTSW 8 12625056 missense probably damaging 1.00
R6257:Tubgcp3 UTSW 8 12649835 splice site probably null
R6314:Tubgcp3 UTSW 8 12648625 missense probably benign 0.02
R6970:Tubgcp3 UTSW 8 12637000 missense probably damaging 0.98
R7173:Tubgcp3 UTSW 8 12639259 intron probably null
R7408:Tubgcp3 UTSW 8 12661359 nonsense probably null
R7502:Tubgcp3 UTSW 8 12641207 missense probably damaging 0.99
R7701:Tubgcp3 UTSW 8 12655974 missense probably benign
R7739:Tubgcp3 UTSW 8 12657561 missense probably benign 0.01
R8169:Tubgcp3 UTSW 8 12616099 missense probably benign
R8327:Tubgcp3 UTSW 8 12654343 missense probably benign 0.11
Posted On2015-04-16