Incidental Mutation 'IGL02648:Vmn1r75'
ID302015
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r75
Ensembl Gene ENSMUSG00000043308
Gene Namevomeronasal 1 receptor 75
SynonymsV1rg6
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.066) question?
Stock #IGL02648
Quality Score
Status
Chromosome7
Chromosomal Location11874630-11884307 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 11881164 bp
ZygosityHeterozygous
Amino Acid Change Phenylalanine to Leucine at position 274 (F274L)
Ref Sequence ENSEMBL: ENSMUSP00000154577 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000057229] [ENSMUST00000226622] [ENSMUST00000226855] [ENSMUST00000227611] [ENSMUST00000228268] [ENSMUST00000228463] [ENSMUST00000228646]
Predicted Effect probably benign
Transcript: ENSMUST00000057229
AA Change: F274L

PolyPhen 2 Score 0.040 (Sensitivity: 0.94; Specificity: 0.83)
SMART Domains Protein: ENSMUSP00000051510
Gene: ENSMUSG00000043308
AA Change: F274L

DomainStartEndE-ValueType
Pfam:TAS2R 1 294 2.9e-10 PFAM
Pfam:V1R 35 293 1e-29 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000226622
AA Change: F274L

PolyPhen 2 Score 0.040 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000226855
AA Change: F274L

PolyPhen 2 Score 0.040 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000227611
AA Change: F232L

PolyPhen 2 Score 0.032 (Sensitivity: 0.95; Specificity: 0.82)
Predicted Effect probably benign
Transcript: ENSMUST00000228268
AA Change: F232L

PolyPhen 2 Score 0.032 (Sensitivity: 0.95; Specificity: 0.82)
Predicted Effect probably benign
Transcript: ENSMUST00000228463
AA Change: F274L

PolyPhen 2 Score 0.040 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000228646
AA Change: F232L

PolyPhen 2 Score 0.032 (Sensitivity: 0.95; Specificity: 0.82)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 34 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aadacl4 A T 4: 144,617,822 probably null Het
Acp4 A G 7: 44,254,990 probably benign Het
Adgrv1 A T 13: 81,511,619 M1997K probably benign Het
Arhgdib T C 6: 136,933,649 D38G probably damaging Het
Bbox1 T G 2: 110,305,526 D36A probably damaging Het
Cacna1c T C 6: 118,757,496 K104R probably damaging Het
Cacna1i G A 15: 80,298,638 C75Y probably damaging Het
Ccdc14 T C 16: 34,697,158 L70S probably damaging Het
Ccdc88a T G 11: 29,501,051 V1580G probably benign Het
Cdadc1 C A 14: 59,586,363 D227Y probably damaging Het
Chd3 T C 11: 69,352,150 Y1415C probably damaging Het
Cngb3 A G 4: 19,428,489 N493S probably benign Het
Dock10 T A 1: 80,574,123 Y665F probably damaging Het
Gm10549 C A 18: 33,464,250 probably benign Het
Gm17677 A T 9: 35,741,109 M21L probably benign Het
Greb1 C T 12: 16,708,682 V678M probably damaging Het
Gucy2c G A 6: 136,729,213 R497* probably null Het
Itgad T C 7: 128,183,374 probably benign Het
Lgr4 C A 2: 110,012,373 T877K probably damaging Het
Lrig3 A G 10: 125,966,594 D40G probably benign Het
Myo3b T C 2: 70,105,372 probably benign Het
Neb A G 2: 52,271,081 Y2193H possibly damaging Het
Olfr1270 T A 2: 90,149,353 I218F possibly damaging Het
Olfr918 T C 9: 38,673,016 M143V probably benign Het
Pard6b A G 2: 168,098,927 Q278R probably benign Het
Pkd2l1 T C 19: 44,155,536 Y366C possibly damaging Het
Prl2c1 A G 13: 27,857,559 D188G probably benign Het
Prl3a1 G T 13: 27,270,235 M65I probably benign Het
Psg26 T A 7: 18,482,766 E49D probably benign Het
Rapgef3 G A 15: 97,758,392 R38W probably damaging Het
Rrn3 T C 16: 13,811,589 F590L probably benign Het
Serpina12 T C 12: 104,038,008 K122E probably benign Het
Slc39a6 T C 18: 24,582,367 I699V probably damaging Het
Tmem259 G A 10: 79,977,817 P443S probably damaging Het
Other mutations in Vmn1r75
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01901:Vmn1r75 APN 7 11880812 missense probably damaging 1.00
IGL02175:Vmn1r75 APN 7 11880847 missense probably damaging 1.00
IGL02399:Vmn1r75 APN 7 11881166 missense possibly damaging 0.82
IGL03372:Vmn1r75 APN 7 11880569 missense probably benign 0.29
R0538:Vmn1r75 UTSW 7 11880870 missense probably damaging 0.97
R0599:Vmn1r75 UTSW 7 11881262 unclassified probably null
R3910:Vmn1r75 UTSW 7 11880830 missense possibly damaging 0.92
R4491:Vmn1r75 UTSW 7 11880982 missense probably damaging 0.97
R5566:Vmn1r75 UTSW 7 11880480 missense probably damaging 1.00
R6051:Vmn1r75 UTSW 7 11881051 missense probably damaging 1.00
R6230:Vmn1r75 UTSW 7 11881039 missense probably damaging 0.98
R6490:Vmn1r75 UTSW 7 11881076 missense probably damaging 1.00
R6570:Vmn1r75 UTSW 7 11880956 missense probably damaging 0.98
R7184:Vmn1r75 UTSW 7 11880988 nonsense probably null
R7189:Vmn1r75 UTSW 7 11880548 missense possibly damaging 0.93
R7501:Vmn1r75 UTSW 7 11881070 missense possibly damaging 0.67
R7997:Vmn1r75 UTSW 7 11880673 missense probably damaging 1.00
Posted On2015-04-16