Incidental Mutation 'IGL02652:Cnnm2'
| ID |
302187 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Cnnm2
|
| Ensembl Gene |
ENSMUSG00000064105 |
| Gene Name |
cyclin M2 |
| Synonyms |
Acdp2 |
| Accession Numbers |
|
| Essential gene? |
Essential
(E-score: 1.000)
|
| Stock # |
IGL02652
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
19 |
| Chromosomal Location |
46750035-46868631 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 46751650 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Arginine to Glutamine
at position 480
(R480Q)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000096972
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000077666]
[ENSMUST00000099373]
|
| AlphaFold |
Q3TWN3 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000077666
AA Change: R480Q
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000076850
Gene: ENSMUSG00000064105
AA Change: R480Q
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
28 |
39 |
N/A |
INTRINSIC |
|
low complexity region
|
41 |
54 |
N/A |
INTRINSIC |
|
low complexity region
|
56 |
67 |
N/A |
INTRINSIC |
|
low complexity region
|
194 |
227 |
N/A |
INTRINSIC |
|
Pfam:DUF21
|
257 |
431 |
7.8e-39 |
PFAM |
|
Blast:CBS
|
455 |
505 |
3e-14 |
BLAST |
|
Pfam:CBS
|
514 |
578 |
7.6e-6 |
PFAM |
|
Blast:cNMP
|
649 |
805 |
2e-49 |
BLAST |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000099373
AA Change: R480Q
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000096972
Gene: ENSMUSG00000064105
AA Change: R480Q
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
28 |
39 |
N/A |
INTRINSIC |
|
low complexity region
|
41 |
54 |
N/A |
INTRINSIC |
|
low complexity region
|
56 |
67 |
N/A |
INTRINSIC |
|
low complexity region
|
194 |
227 |
N/A |
INTRINSIC |
|
Pfam:DUF21
|
257 |
431 |
2.6e-39 |
PFAM |
|
Blast:CBS
|
455 |
505 |
3e-14 |
BLAST |
|
Pfam:CBS
|
514 |
578 |
1.1e-5 |
PFAM |
|
Blast:cNMP
|
649 |
827 |
1e-46 |
BLAST |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the ancient conserved domain containing protein family. Members of this protein family contain a cyclin box motif and have structural similarity to the cyclins. The encoded protein may play an important role in magnesium homeostasis by mediating the epithelial transport and renal reabsorption of Mg2+. Mutations in this gene are associated with renal hypomagnesemia. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Dec 2011]
|
| Allele List at MGI |
All alleles(90) : Gene trapped(90) |
| Other mutations in this stock |
Total: 41 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Arhgap28 |
A |
T |
17: 68,191,795 (GRCm39) |
D139E |
probably benign |
Het |
| Asph |
C |
T |
4: 9,529,984 (GRCm39) |
V347I |
probably benign |
Het |
| Ccdc138 |
A |
T |
10: 58,348,901 (GRCm39) |
D149V |
probably benign |
Het |
| Cep192 |
A |
G |
18: 67,991,921 (GRCm39) |
|
probably benign |
Het |
| Col24a1 |
C |
A |
3: 145,198,056 (GRCm39) |
S1321* |
probably null |
Het |
| Cops6 |
T |
G |
5: 138,159,700 (GRCm39) |
|
probably null |
Het |
| Crim1 |
G |
A |
17: 78,623,106 (GRCm39) |
A435T |
probably damaging |
Het |
| Cttn |
G |
T |
7: 143,995,468 (GRCm39) |
Q382K |
probably benign |
Het |
| Dhx38 |
A |
G |
8: 110,282,761 (GRCm39) |
L635P |
probably damaging |
Het |
| Dmtf1 |
T |
A |
5: 9,171,853 (GRCm39) |
T458S |
probably benign |
Het |
| Dnah5 |
T |
C |
15: 28,366,333 (GRCm39) |
F2682S |
probably damaging |
Het |
| Dnah6 |
T |
A |
6: 73,072,087 (GRCm39) |
Q2413L |
probably damaging |
Het |
| Dock10 |
T |
C |
1: 80,570,561 (GRCm39) |
|
probably null |
Het |
| Engase |
C |
T |
11: 118,369,776 (GRCm39) |
P63S |
probably damaging |
Het |
| Grik4 |
A |
G |
9: 42,586,573 (GRCm39) |
V94A |
possibly damaging |
Het |
| Heatr6 |
T |
C |
11: 83,660,558 (GRCm39) |
V566A |
probably damaging |
Het |
| Hydin |
A |
C |
8: 111,316,154 (GRCm39) |
T4349P |
possibly damaging |
Het |
| Inpp4b |
G |
A |
8: 82,497,429 (GRCm39) |
|
probably benign |
Het |
| Mertk |
A |
G |
2: 128,643,190 (GRCm39) |
E863G |
probably benign |
Het |
| Muc19 |
T |
A |
15: 91,762,009 (GRCm39) |
|
noncoding transcript |
Het |
| Myo9a |
T |
A |
9: 59,771,211 (GRCm39) |
F928I |
probably damaging |
Het |
| Nyap2 |
T |
C |
1: 81,219,435 (GRCm39) |
Y486H |
probably damaging |
Het |
| Oas1e |
T |
C |
5: 120,933,470 (GRCm39) |
R32G |
probably damaging |
Het |
| Or14j2 |
A |
T |
17: 37,885,836 (GRCm39) |
Y159* |
probably null |
Het |
| Or4k48 |
A |
G |
2: 111,475,839 (GRCm39) |
F168L |
probably benign |
Het |
| Osbpl6 |
G |
A |
2: 76,423,798 (GRCm39) |
R848Q |
probably damaging |
Het |
| Piezo2 |
G |
A |
18: 63,157,546 (GRCm39) |
T2388I |
probably damaging |
Het |
| Prkdc |
A |
G |
16: 15,600,951 (GRCm39) |
T2871A |
probably benign |
Het |
| Ptpn12 |
T |
C |
5: 21,207,435 (GRCm39) |
K308E |
probably benign |
Het |
| Rgsl1 |
A |
G |
1: 153,701,236 (GRCm39) |
L441P |
probably damaging |
Het |
| Rictor |
T |
C |
15: 6,805,668 (GRCm39) |
|
probably null |
Het |
| Scn2a |
T |
A |
2: 65,532,382 (GRCm39) |
S665T |
possibly damaging |
Het |
| Scn8a |
A |
G |
15: 100,911,357 (GRCm39) |
I926V |
probably damaging |
Het |
| Snrpg |
T |
C |
6: 86,353,510 (GRCm39) |
I30T |
probably damaging |
Het |
| Spryd3 |
A |
T |
15: 102,027,425 (GRCm39) |
|
probably null |
Het |
| Svil |
A |
G |
18: 5,114,531 (GRCm39) |
D2036G |
probably damaging |
Het |
| Synj2 |
A |
T |
17: 6,067,868 (GRCm39) |
I551F |
probably damaging |
Het |
| Tiam2 |
A |
T |
17: 3,489,971 (GRCm39) |
|
probably benign |
Het |
| Tmem132b |
T |
C |
5: 125,864,639 (GRCm39) |
F915S |
probably damaging |
Het |
| Try5 |
C |
A |
6: 41,288,342 (GRCm39) |
V204L |
probably benign |
Het |
| Vmn2r6 |
T |
C |
3: 64,463,749 (GRCm39) |
T362A |
probably benign |
Het |
|
| Other mutations in Cnnm2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00493:Cnnm2
|
APN |
19 |
46,751,659 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01971:Cnnm2
|
APN |
19 |
46,860,115 (GRCm39) |
missense |
probably benign |
0.19 |
|
IGL02003:Cnnm2
|
APN |
19 |
46,856,998 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02068:Cnnm2
|
APN |
19 |
46,865,827 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
IGL02185:Cnnm2
|
APN |
19 |
46,751,434 (GRCm39) |
missense |
probably benign |
0.45 |
|
IGL02682:Cnnm2
|
APN |
19 |
46,750,515 (GRCm39) |
missense |
probably benign |
0.37 |
|
IGL03009:Cnnm2
|
APN |
19 |
46,865,794 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03378:Cnnm2
|
APN |
19 |
46,866,473 (GRCm39) |
missense |
possibly damaging |
0.76 |
|
R1581:Cnnm2
|
UTSW |
19 |
46,751,562 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3700:Cnnm2
|
UTSW |
19 |
46,750,990 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3892:Cnnm2
|
UTSW |
19 |
46,750,232 (GRCm39) |
nonsense |
probably null |
|
|
R3911:Cnnm2
|
UTSW |
19 |
46,866,375 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R4508:Cnnm2
|
UTSW |
19 |
46,865,709 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4678:Cnnm2
|
UTSW |
19 |
46,751,685 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R4878:Cnnm2
|
UTSW |
19 |
46,847,522 (GRCm39) |
missense |
probably benign |
0.45 |
|
R5154:Cnnm2
|
UTSW |
19 |
46,751,571 (GRCm39) |
missense |
probably benign |
0.02 |
|
R5445:Cnnm2
|
UTSW |
19 |
46,865,727 (GRCm39) |
missense |
possibly damaging |
0.66 |
|
R5771:Cnnm2
|
UTSW |
19 |
46,845,434 (GRCm39) |
splice site |
probably null |
|
|
R5914:Cnnm2
|
UTSW |
19 |
46,751,616 (GRCm39) |
missense |
probably benign |
0.07 |
|
R6263:Cnnm2
|
UTSW |
19 |
46,845,344 (GRCm39) |
missense |
probably benign |
0.30 |
|
R6715:Cnnm2
|
UTSW |
19 |
46,842,412 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6881:Cnnm2
|
UTSW |
19 |
46,865,658 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7022:Cnnm2
|
UTSW |
19 |
46,847,379 (GRCm39) |
splice site |
probably null |
|
|
R7022:Cnnm2
|
UTSW |
19 |
46,750,989 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7486:Cnnm2
|
UTSW |
19 |
46,750,513 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R7600:Cnnm2
|
UTSW |
19 |
46,750,506 (GRCm39) |
missense |
probably benign |
0.02 |
|
R7648:Cnnm2
|
UTSW |
19 |
46,866,339 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7800:Cnnm2
|
UTSW |
19 |
46,866,420 (GRCm39) |
missense |
probably benign |
0.28 |
|
R8867:Cnnm2
|
UTSW |
19 |
46,750,996 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8971:Cnnm2
|
UTSW |
19 |
46,845,362 (GRCm39) |
missense |
probably benign |
0.28 |
|
R9433:Cnnm2
|
UTSW |
19 |
46,750,807 (GRCm39) |
missense |
probably benign |
0.23 |
|
R9463:Cnnm2
|
UTSW |
19 |
46,750,990 (GRCm39) |
missense |
probably damaging |
1.00 |
|
X0017:Cnnm2
|
UTSW |
19 |
46,750,902 (GRCm39) |
missense |
probably benign |
0.05 |
|
X0018:Cnnm2
|
UTSW |
19 |
46,751,212 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2015-04-16 |
Incidental Mutation