Incidental Mutation 'IGL02668:Ccdc66'
| ID |
302793 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Ccdc66
|
| Ensembl Gene |
ENSMUSG00000046753 |
| Gene Name |
coiled-coil domain containing 66 |
| Synonyms |
E230015L20Rik |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.153)
|
| Stock # |
IGL02668
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
14 |
| Chromosomal Location |
27203047-27230417 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 27219298 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Lysine to Glutamic Acid
at position 309
(K309E)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000153023
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000050480]
[ENSMUST00000223689]
|
| AlphaFold |
Q6NS45 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000050480
AA Change: K153E
PolyPhen 2
Score 0.082 (Sensitivity: 0.93; Specificity: 0.85)
|
| SMART Domains |
Protein: ENSMUSP00000052546
Gene: ENSMUSG00000046753
AA Change: K153E
| Domain | Start | End | E-Value | Type |
|---|
|
coiled coil region
|
252 |
284 |
N/A |
INTRINSIC |
|
Pfam:CCDC66
|
409 |
561 |
1e-49 |
PFAM |
|
low complexity region
|
715 |
721 |
N/A |
INTRINSIC |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000223689
AA Change: K309E
PolyPhen 2
Score 0.936 (Sensitivity: 0.80; Specificity: 0.94)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
PHENOTYPE: Mice homozygous for a null mutation display slowly progressing photoreceptor degeneration. [provided by MGI curators]
|
| Allele List at MGI |
All alleles(6) : Gene trapped(6)
|
| Other mutations in this stock |
Total: 43 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4930596D02Rik |
A |
G |
14: 35,532,074 (GRCm39) |
M167T |
probably benign |
Het |
| Abcc4 |
G |
T |
14: 118,848,887 (GRCm39) |
S488R |
probably damaging |
Het |
| Adprm |
G |
T |
11: 66,931,073 (GRCm39) |
D230E |
possibly damaging |
Het |
| Atp2a3 |
C |
A |
11: 72,866,165 (GRCm39) |
H262N |
probably benign |
Het |
| Bltp3a |
A |
C |
17: 28,105,549 (GRCm39) |
I692L |
possibly damaging |
Het |
| Cyb561d2 |
C |
T |
9: 107,417,371 (GRCm39) |
A127T |
probably benign |
Het |
| Dctn1 |
T |
A |
6: 83,168,030 (GRCm39) |
M357K |
possibly damaging |
Het |
| Diras2 |
T |
C |
13: 52,661,806 (GRCm39) |
N167S |
probably benign |
Het |
| Dmgdh |
T |
G |
13: 93,840,418 (GRCm39) |
V283G |
probably damaging |
Het |
| Dmxl2 |
A |
T |
9: 54,324,229 (GRCm39) |
W1052R |
probably damaging |
Het |
| Dnah6 |
A |
T |
6: 73,098,806 (GRCm39) |
V2083D |
possibly damaging |
Het |
| Dnai7 |
G |
T |
6: 145,150,983 (GRCm39) |
R30S |
unknown |
Het |
| Exoc4 |
T |
G |
6: 33,898,467 (GRCm39) |
F895L |
probably benign |
Het |
| Fsip1 |
G |
T |
2: 118,082,206 (GRCm39) |
A76E |
probably benign |
Het |
| Fsip2 |
A |
G |
2: 82,828,662 (GRCm39) |
I6820V |
probably benign |
Het |
| Hdac10 |
G |
A |
15: 89,009,847 (GRCm39) |
P395L |
probably benign |
Het |
| Ing3 |
A |
G |
6: 21,950,058 (GRCm39) |
D17G |
probably damaging |
Het |
| Map3k4 |
A |
T |
17: 12,454,840 (GRCm39) |
F1383L |
possibly damaging |
Het |
| Myct1 |
C |
A |
10: 5,554,513 (GRCm39) |
P127T |
probably damaging |
Het |
| Or52s1 |
A |
T |
7: 102,861,942 (GRCm39) |
I281F |
possibly damaging |
Het |
| Osbpl7 |
G |
T |
11: 96,958,031 (GRCm39) |
A625S |
possibly damaging |
Het |
| Padi2 |
C |
T |
4: 140,677,191 (GRCm39) |
R660C |
probably benign |
Het |
| Paip1 |
A |
T |
13: 119,574,607 (GRCm39) |
I185F |
probably damaging |
Het |
| Pals2 |
C |
T |
6: 50,171,509 (GRCm39) |
T386I |
probably damaging |
Het |
| Phykpl |
G |
A |
11: 51,484,514 (GRCm39) |
|
probably null |
Het |
| Plekhg6 |
G |
A |
6: 125,349,766 (GRCm39) |
|
probably benign |
Het |
| Plxna1 |
A |
T |
6: 89,334,251 (GRCm39) |
L126* |
probably null |
Het |
| Rchy1 |
A |
T |
5: 92,110,577 (GRCm39) |
M1K |
probably null |
Het |
| Rfx3 |
T |
C |
19: 27,793,014 (GRCm39) |
|
probably benign |
Het |
| Sdr9c7 |
T |
C |
10: 127,738,267 (GRCm39) |
F182L |
probably damaging |
Het |
| Sgpl1 |
A |
C |
10: 60,941,229 (GRCm39) |
V294G |
probably damaging |
Het |
| Sh2b1 |
A |
G |
7: 126,071,646 (GRCm39) |
S180P |
possibly damaging |
Het |
| Sorbs1 |
T |
C |
19: 40,303,125 (GRCm39) |
D488G |
probably damaging |
Het |
| Stab2 |
A |
G |
10: 86,682,027 (GRCm39) |
|
probably benign |
Het |
| Sycp1 |
A |
C |
3: 102,727,847 (GRCm39) |
|
probably benign |
Het |
| Tmem245 |
T |
C |
4: 56,925,081 (GRCm39) |
K347E |
possibly damaging |
Het |
| Tnk1 |
A |
G |
11: 69,747,749 (GRCm39) |
M51T |
probably damaging |
Het |
| Trpm2 |
C |
T |
10: 77,771,776 (GRCm39) |
R621H |
probably damaging |
Het |
| Ubd |
G |
T |
17: 37,506,420 (GRCm39) |
R102L |
probably benign |
Het |
| Vmn2r103 |
G |
T |
17: 20,014,389 (GRCm39) |
A394S |
probably benign |
Het |
| Zfp324 |
T |
A |
7: 12,704,773 (GRCm39) |
C321S |
probably damaging |
Het |
| Zfp488 |
G |
T |
14: 33,692,777 (GRCm39) |
Q129K |
probably benign |
Het |
| Zmpste24 |
T |
A |
4: 120,918,297 (GRCm39) |
N442Y |
probably damaging |
Het |
|
| Other mutations in Ccdc66 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00516:Ccdc66
|
APN |
14 |
27,220,413 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01333:Ccdc66
|
APN |
14 |
27,215,272 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
IGL01684:Ccdc66
|
APN |
14 |
27,222,206 (GRCm39) |
missense |
possibly damaging |
0.66 |
|
IGL02327:Ccdc66
|
APN |
14 |
27,215,343 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02698:Ccdc66
|
APN |
14 |
27,212,749 (GRCm39) |
nonsense |
probably null |
|
|
IGL03293:Ccdc66
|
APN |
14 |
27,212,628 (GRCm39) |
missense |
probably damaging |
1.00 |
|
1mM(1):Ccdc66
|
UTSW |
14 |
27,220,732 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
IGL02796:Ccdc66
|
UTSW |
14 |
27,208,523 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R0374:Ccdc66
|
UTSW |
14 |
27,220,430 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0381:Ccdc66
|
UTSW |
14 |
27,213,890 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0498:Ccdc66
|
UTSW |
14 |
27,222,197 (GRCm39) |
critical splice donor site |
probably null |
|
|
R0831:Ccdc66
|
UTSW |
14 |
27,219,313 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0969:Ccdc66
|
UTSW |
14 |
27,219,319 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1558:Ccdc66
|
UTSW |
14 |
27,208,463 (GRCm39) |
missense |
probably benign |
0.41 |
|
R2203:Ccdc66
|
UTSW |
14 |
27,208,790 (GRCm39) |
missense |
probably benign |
0.03 |
|
R4015:Ccdc66
|
UTSW |
14 |
27,205,793 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4225:Ccdc66
|
UTSW |
14 |
27,212,736 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4584:Ccdc66
|
UTSW |
14 |
27,222,468 (GRCm39) |
missense |
probably benign |
0.31 |
|
R4600:Ccdc66
|
UTSW |
14 |
27,222,377 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4601:Ccdc66
|
UTSW |
14 |
27,222,377 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4603:Ccdc66
|
UTSW |
14 |
27,222,377 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4610:Ccdc66
|
UTSW |
14 |
27,222,377 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4611:Ccdc66
|
UTSW |
14 |
27,222,377 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4832:Ccdc66
|
UTSW |
14 |
27,222,524 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5098:Ccdc66
|
UTSW |
14 |
27,220,750 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5322:Ccdc66
|
UTSW |
14 |
27,204,484 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5586:Ccdc66
|
UTSW |
14 |
27,228,668 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5681:Ccdc66
|
UTSW |
14 |
27,208,698 (GRCm39) |
missense |
probably benign |
0.07 |
|
R5788:Ccdc66
|
UTSW |
14 |
27,220,448 (GRCm39) |
missense |
probably benign |
0.10 |
|
R5790:Ccdc66
|
UTSW |
14 |
27,222,404 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R6329:Ccdc66
|
UTSW |
14 |
27,208,441 (GRCm39) |
missense |
probably benign |
0.20 |
|
R7171:Ccdc66
|
UTSW |
14 |
27,215,229 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R7268:Ccdc66
|
UTSW |
14 |
27,208,880 (GRCm39) |
missense |
probably benign |
0.24 |
|
R7337:Ccdc66
|
UTSW |
14 |
27,222,290 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7348:Ccdc66
|
UTSW |
14 |
27,222,293 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7552:Ccdc66
|
UTSW |
14 |
27,220,820 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R8698:Ccdc66
|
UTSW |
14 |
27,212,647 (GRCm39) |
missense |
probably benign |
0.07 |
|
R8990:Ccdc66
|
UTSW |
14 |
27,208,655 (GRCm39) |
missense |
probably benign |
0.34 |
|
R9065:Ccdc66
|
UTSW |
14 |
27,213,850 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9455:Ccdc66
|
UTSW |
14 |
27,208,872 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9599:Ccdc66
|
UTSW |
14 |
27,219,381 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2015-04-16 |
Incidental Mutation