Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02676:Pramel21'

303117

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Pramel21

Ensembl Gene

ENSMUSG00000066688

Gene Name

PRAME like 21

Synonyms

Gm13083

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.067) question?

Stock #

IGL02676

Quality Score

Status

Chromosome

Chromosomal Location

143341573-143345165 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 143342667 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Serine at position 258 (F258S)

Ref Sequence

ENSEMBL: ENSMUSP00000101399 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000105773]

AlphaFold

A2AGW5

Predicted Effect

possibly damaging
Transcript: ENSMUST00000105773
AA Change: F258S

PolyPhen 2 Score 0.747 (Sensitivity: 0.85; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000101399
Gene: ENSMUSG00000066688
AA Change: F258S

Domain	Start	End	E-Value	Type
SCOP:d1a4ya_	223	431	7e-12	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000120556

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 48 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Apc	G	A	18: 34,448,687 (GRCm39)	S1827N	probably damaging	Het
Atrnl1	T	A	19: 57,680,316 (GRCm39)	C739S	probably damaging	Het
Cep350	T	C	1: 155,737,977 (GRCm39)	E2622G	possibly damaging	Het
Chd5	C	T	4: 152,440,530 (GRCm39)		probably benign	Het
Chst11	T	A	10: 83,027,563 (GRCm39)	L330Q	probably damaging	Het
Clcnka	A	T	4: 141,120,094 (GRCm39)	V275E	probably damaging	Het
Clip4	G	A	17: 72,135,616 (GRCm39)	S456N	probably damaging	Het
Cmya5	A	T	13: 93,229,361 (GRCm39)	I1909N	probably damaging	Het
Cyp26b1	A	G	6: 84,553,626 (GRCm39)	I176T	probably damaging	Het
Dst	A	G	1: 34,346,668 (GRCm39)	R7717G	probably damaging	Het
Eml2	C	T	7: 18,918,846 (GRCm39)	R99*	probably null	Het
Fibin	T	C	2: 110,192,929 (GRCm39)	Q71R	probably benign	Het
Fsip2	T	G	2: 82,812,501 (GRCm39)	I2940S	possibly damaging	Het
Gabrb3	G	T	7: 57,241,112 (GRCm39)		probably benign	Het
Gfra1	G	A	19: 58,441,787 (GRCm39)	T48I	probably damaging	Het
Gm6483	C	T	8: 19,743,675 (GRCm39)		noncoding transcript	Het
Hdgfl1	G	A	13: 26,953,348 (GRCm39)	R242C	possibly damaging	Het
Hmcn1	T	C	1: 150,494,760 (GRCm39)	T4110A	probably benign	Het
Lama2	T	G	10: 26,994,489 (GRCm39)	M1807L	probably benign	Het
Larp4	T	C	15: 99,888,302 (GRCm39)	V113A	possibly damaging	Het
Mkx	T	C	18: 7,000,640 (GRCm39)	T101A	probably benign	Het
Nfe2l1	A	G	11: 96,718,491 (GRCm39)	F15L	probably damaging	Het
Nherf2	A	T	17: 24,860,930 (GRCm39)	V204E	probably damaging	Het
Nif3l1	G	A	1: 58,494,895 (GRCm39)		probably null	Het
Nop14	A	G	5: 34,796,565 (GRCm39)	V764A	probably damaging	Het
Nosip	C	A	7: 44,726,752 (GRCm39)	A259E	probably damaging	Het
Ntn5	T	C	7: 45,341,300 (GRCm39)		probably benign	Het
Or9g20	T	C	2: 85,629,934 (GRCm39)	I227V	possibly damaging	Het
Phospho1	G	A	11: 95,721,714 (GRCm39)	G128D	probably damaging	Het
Ppp4r3a	G	A	12: 101,008,770 (GRCm39)	T703M	probably benign	Het
Pramel58	A	G	5: 94,831,730 (GRCm39)	T246A	possibly damaging	Het
Prdm8	G	A	5: 98,334,418 (GRCm39)	E662K	probably damaging	Het
Ralgapa1	A	G	12: 55,723,202 (GRCm39)	S1775P	probably damaging	Het
Rapgef6	T	C	11: 54,540,172 (GRCm39)		probably benign	Het
Rasef	T	C	4: 73,677,966 (GRCm39)	T87A	possibly damaging	Het
Scrn3	A	G	2: 73,160,215 (GRCm39)	Q286R	probably benign	Het
Sema3d	A	T	5: 12,620,945 (GRCm39)	Q517L	probably benign	Het
Taf6l	T	C	19: 8,752,413 (GRCm39)	Y425C	probably damaging	Het
Tbk1	T	C	10: 121,403,985 (GRCm39)	N254S	possibly damaging	Het
Tcf3	C	T	10: 80,256,925 (GRCm39)	G64R	probably damaging	Het
Tmco4	T	C	4: 138,750,380 (GRCm39)		probably null	Het
Trappc11	A	G	8: 47,946,448 (GRCm39)		probably benign	Het
Vmn1r19	A	T	6: 57,382,025 (GRCm39)	I193F	possibly damaging	Het
Vmn2r14	G	A	5: 109,367,882 (GRCm39)	T370I	probably benign	Het
Vmn2r65	T	A	7: 84,589,381 (GRCm39)	H845L	possibly damaging	Het
Vmn2r98	A	T	17: 19,285,521 (GRCm39)	T114S	probably benign	Het
Zfp280d	A	T	9: 72,242,356 (GRCm39)	R661S	probably damaging	Het
Zranb1	T	C	7: 132,568,410 (GRCm39)	I356T	probably benign	Het

Other mutations in Pramel21

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02052:Pramel21	APN	4	143,341,643 (GRCm39)	missense	probably benign	0.00
IGL02390:Pramel21	APN	4	143,341,895 (GRCm39)	missense	probably benign	0.29
IGL03381:Pramel21	APN	4	143,343,625 (GRCm39)	splice site	probably benign
IGL03410:Pramel21	APN	4	143,341,851 (GRCm39)	missense	probably benign	0.02
H8562:Pramel21	UTSW	4	143,341,920 (GRCm39)	splice site	probably benign
PIT4151001:Pramel21	UTSW	4	143,342,722 (GRCm39)	nonsense	probably null
R0157:Pramel21	UTSW	4	143,342,366 (GRCm39)	missense	probably damaging	0.98
R0352:Pramel21	UTSW	4	143,342,559 (GRCm39)	missense	possibly damaging	0.92
R0494:Pramel21	UTSW	4	143,342,726 (GRCm39)	missense	probably benign	0.33
R0688:Pramel21	UTSW	4	143,343,927 (GRCm39)	missense	probably benign	0.00
R0884:Pramel21	UTSW	4	143,341,754 (GRCm39)	missense	probably benign	0.01
R1267:Pramel21	UTSW	4	143,342,304 (GRCm39)	missense	possibly damaging	0.95
R1418:Pramel21	UTSW	4	143,342,604 (GRCm39)	missense	probably benign	0.15
R1761:Pramel21	UTSW	4	143,342,438 (GRCm39)	missense	probably benign	0.00
R3148:Pramel21	UTSW	4	143,344,047 (GRCm39)	missense	probably benign	0.30
R4063:Pramel21	UTSW	4	143,342,559 (GRCm39)	missense	possibly damaging	0.77
R4115:Pramel21	UTSW	4	143,344,026 (GRCm39)	missense	probably benign	0.06
R4760:Pramel21	UTSW	4	143,343,801 (GRCm39)	missense	probably benign	0.04
R5516:Pramel21	UTSW	4	143,342,253 (GRCm39)	missense	possibly damaging	0.49
R5603:Pramel21	UTSW	4	143,344,066 (GRCm39)	nonsense	probably null
R5724:Pramel21	UTSW	4	143,344,026 (GRCm39)	missense	probably benign	0.06
R5796:Pramel21	UTSW	4	143,341,778 (GRCm39)	missense	probably benign	0.12
R5879:Pramel21	UTSW	4	143,344,161 (GRCm39)	missense	possibly damaging	0.64
R6181:Pramel21	UTSW	4	143,342,828 (GRCm39)	critical splice donor site	probably null
R7155:Pramel21	UTSW	4	143,342,735 (GRCm39)	missense	probably benign	0.01
R7492:Pramel21	UTSW	4	143,342,744 (GRCm39)	missense	not run
R7913:Pramel21	UTSW	4	143,341,615 (GRCm39)	missense	possibly damaging	0.87
R7995:Pramel21	UTSW	4	143,342,570 (GRCm39)	missense	possibly damaging	0.89
R8126:Pramel21	UTSW	4	143,343,635 (GRCm39)	missense	possibly damaging	0.87
R8901:Pramel21	UTSW	4	143,343,677 (GRCm39)	missense	probably benign	0.00
R9061:Pramel21	UTSW	4	143,342,741 (GRCm39)	missense	possibly damaging	0.94
R9095:Pramel21	UTSW	4	143,341,760 (GRCm39)	missense	probably damaging	1.00
R9170:Pramel21	UTSW	4	143,341,600 (GRCm39)	missense	possibly damaging	0.78
R9445:Pramel21	UTSW	4	143,343,795 (GRCm39)	missense	probably damaging	1.00
R9666:Pramel21	UTSW	4	143,341,699 (GRCm39)	missense	probably benign	0.00
Z1088:Pramel21	UTSW	4	143,341,802 (GRCm39)	missense	possibly damaging	0.78
Z1177:Pramel21	UTSW	4	143,342,730 (GRCm39)	missense	probably benign	0.05

Posted On

2015-04-16