Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL02709:Acsm5'

304502

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Acsm5

Ensembl Gene

ENSMUSG00000030972

Gene Name

acyl-CoA synthetase medium-chain family member 5

Synonyms

C730027J19Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.235) question?

Stock #

IGL02709

Quality Score

Status

Chromosome

Chromosomal Location

119125354-119142583 bp(+) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

G to A at 119134041 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tryptophan to Stop codon at position 274 (W274*)

Ref Sequence

ENSEMBL: ENSMUSP00000146520 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000066465] [ENSMUST00000207307] [ENSMUST00000207381] [ENSMUST00000207387] [ENSMUST00000207440] [ENSMUST00000207796] [ENSMUST00000207813]

AlphaFold

Q8BGA8

Predicted Effect

probably null
Transcript: ENSMUST00000066465
AA Change: W274*

SMART Domains

Protein: ENSMUSP00000063416
Gene: ENSMUSG00000030972
AA Change: W274*

Domain	Start	End	E-Value	Type
low complexity region	26	32	N/A	INTRINSIC
Pfam:AMP-binding	65	477	2.9e-78	PFAM
Pfam:AMP-binding_C	485	565	3.3e-22	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000207307

Predicted Effect

probably benign
Transcript: ENSMUST00000207381

Predicted Effect

probably null
Transcript: ENSMUST00000207387
AA Change: W274*

Predicted Effect

probably null
Transcript: ENSMUST00000207440
AA Change: W274*

Predicted Effect

probably null
Transcript: ENSMUST00000207796
AA Change: W274*

Predicted Effect

probably benign
Transcript: ENSMUST00000207813

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadacl2fm2	A	G	3: 59,654,619 (GRCm39)	Y151C	probably damaging	Het
Aco1	G	A	4: 40,180,199 (GRCm39)	V367M	possibly damaging	Het
Ago1	G	A	4: 126,347,433 (GRCm39)	Q135*	probably null	Het
Bmpr1b	A	T	3: 141,562,314 (GRCm39)	L291Q	probably damaging	Het
Cdcp1	A	G	9: 123,002,879 (GRCm39)	Y731H	probably damaging	Het
Clrn2	A	G	5: 45,617,495 (GRCm39)	N122S	probably damaging	Het
Col4a3	G	T	1: 82,656,833 (GRCm39)	G751W	unknown	Het
Ctsc	C	T	7: 87,957,347 (GRCm39)	A294V	probably damaging	Het
Cyp26a1	T	C	19: 37,688,426 (GRCm39)	L316P	probably damaging	Het
Dennd6b	A	T	15: 89,075,125 (GRCm39)		probably benign	Het
Dnah10	T	A	5: 124,850,809 (GRCm39)	Y1659*	probably null	Het
Dspp	A	C	5: 104,325,116 (GRCm39)	D493A	unknown	Het
Dyrk1a	C	T	16: 94,486,102 (GRCm39)	A445V	probably benign	Het
E030025P04Rik	C	A	11: 109,030,324 (GRCm39)		probably benign	Het
Ecpas	A	G	4: 58,872,699 (GRCm39)	S201P	possibly damaging	Het
Foxd4	T	C	19: 24,876,973 (GRCm39)	H409R	probably damaging	Het
Fubp3	A	G	2: 31,485,343 (GRCm39)		probably benign	Het
Herc1	A	G	9: 66,404,962 (GRCm39)	K4511E	probably damaging	Het
Ifna1	A	G	4: 88,768,523 (GRCm39)	D67G	probably benign	Het
Map1lc3b	T	A	8: 122,322,768 (GRCm39)	L82Q	probably damaging	Het
Mcc	A	T	18: 44,578,877 (GRCm39)	S844T	possibly damaging	Het
Mccc1	A	T	3: 36,044,888 (GRCm39)	*85K	probably null	Het
Memo1	G	A	17: 74,552,027 (GRCm39)	L90F	probably damaging	Het
Mfrp	A	G	9: 44,014,561 (GRCm39)	H236R	probably benign	Het
Mmrn1	G	A	6: 60,950,030 (GRCm39)	D327N	probably damaging	Het
Mycbp2	T	C	14: 103,392,697 (GRCm39)	E3178G	probably damaging	Het
Pcsk9	A	G	4: 106,304,886 (GRCm39)		probably benign	Het
Pros1	T	C	16: 62,719,308 (GRCm39)	L110P	probably damaging	Het
Reck	A	G	4: 43,913,791 (GRCm39)	Y215C	probably damaging	Het
Ripk4	T	C	16: 97,544,766 (GRCm39)	D627G	probably damaging	Het
Rnf144a	G	T	12: 26,371,009 (GRCm39)	H151N	probably damaging	Het
Slc39a9	T	A	12: 80,713,421 (GRCm39)	H106Q	probably damaging	Het
Stab2	A	G	10: 86,682,029 (GRCm39)		probably benign	Het
Sympk	T	G	7: 18,781,463 (GRCm39)	H806Q	probably benign	Het
Tars2	C	A	3: 95,649,383 (GRCm39)		probably benign	Het
Thap3	T	A	4: 152,070,169 (GRCm39)	H75L	probably damaging	Het
Trappc8	T	C	18: 20,970,235 (GRCm39)	I918M	possibly damaging	Het
Ube2j2	T	C	4: 156,041,788 (GRCm39)	V249A	probably damaging	Het
Ubqln3	T	G	7: 103,790,543 (GRCm39)	T516P	probably benign	Het
Unc13c	A	G	9: 73,466,238 (GRCm39)	S1810P	probably benign	Het
Vmn1r4	T	A	6: 56,933,524 (GRCm39)	Y9*	probably null	Het
Vmn1r89	T	A	7: 12,954,131 (GRCm39)	M221K	probably damaging	Het
Vmn2r1	G	T	3: 64,012,355 (GRCm39)	V739F	probably benign	Het
Vmn2r25	C	T	6: 123,816,723 (GRCm39)	R286Q	possibly damaging	Het
Vmn2r91	T	A	17: 18,325,711 (GRCm39)	Y110N	possibly damaging	Het
Zbtb48	T	C	4: 152,105,851 (GRCm39)	H418R	probably damaging	Het

Other mutations in Acsm5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00498:Acsm5	APN	7	119,141,661 (GRCm39)	critical splice donor site	probably null
IGL01662:Acsm5	APN	7	119,137,511 (GRCm39)	missense	probably damaging	1.00
IGL02228:Acsm5	APN	7	119,131,089 (GRCm39)	missense	probably damaging	1.00
IGL02380:Acsm5	APN	7	119,136,509 (GRCm39)	missense	probably benign	0.05
P4717OSA:Acsm5	UTSW	7	119,131,195 (GRCm39)	missense	probably benign	0.12
R0506:Acsm5	UTSW	7	119,137,319 (GRCm39)	nonsense	probably null
R0518:Acsm5	UTSW	7	119,135,023 (GRCm39)	missense	possibly damaging	0.95
R0866:Acsm5	UTSW	7	119,140,123 (GRCm39)	missense	probably damaging	0.99
R1171:Acsm5	UTSW	7	119,140,075 (GRCm39)	missense	probably damaging	0.99
R2362:Acsm5	UTSW	7	119,127,649 (GRCm39)	start gained	probably benign
R2511:Acsm5	UTSW	7	119,129,677 (GRCm39)	missense	possibly damaging	0.80
R4670:Acsm5	UTSW	7	119,130,983 (GRCm39)	splice site	probably null
R4908:Acsm5	UTSW	7	119,137,314 (GRCm39)	missense	probably damaging	1.00
R4913:Acsm5	UTSW	7	119,133,566 (GRCm39)	missense	probably damaging	0.98
R5038:Acsm5	UTSW	7	119,134,034 (GRCm39)	missense	probably damaging	1.00
R5112:Acsm5	UTSW	7	119,136,502 (GRCm39)	missense	possibly damaging	0.95
R6337:Acsm5	UTSW	7	119,133,458 (GRCm39)	missense	probably benign	0.00
R6481:Acsm5	UTSW	7	119,134,104 (GRCm39)	missense	probably benign	0.02
R7268:Acsm5	UTSW	7	119,136,511 (GRCm39)	missense	probably benign	0.38
R7275:Acsm5	UTSW	7	119,136,511 (GRCm39)	missense	possibly damaging	0.81
R7509:Acsm5	UTSW	7	119,133,611 (GRCm39)	missense	probably benign
R7794:Acsm5	UTSW	7	119,137,352 (GRCm39)	unclassified	probably benign
R8021:Acsm5	UTSW	7	119,141,616 (GRCm39)	missense	possibly damaging	0.72
R8178:Acsm5	UTSW	7	119,141,618 (GRCm39)	missense	probably damaging	1.00
R8797:Acsm5	UTSW	7	119,137,374 (GRCm39)	missense	probably damaging	1.00
Z1088:Acsm5	UTSW	7	119,136,434 (GRCm39)	missense	probably damaging	0.96

Posted On

2015-04-16