Incidental Mutation 'IGL02731:Mib1'
ID305475
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Mib1
Ensembl Gene ENSMUSG00000024294
Gene Namemindbomb E3 ubiquitin protein ligase 1
SynonymsMib, mind bomb-1, skeletrophin, E430019M12Rik
Accession Numbers
Is this an essential gene? Essential (E-score: 1.000) question?
Stock #IGL02731
Quality Score
Status
Chromosome18
Chromosomal Location10725548-10818704 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 10800115 bp
ZygosityHeterozygous
Amino Acid Change Glutamic Acid to Glycine at position 818 (E818G)
Ref Sequence ENSEMBL: ENSMUSP00000131712 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000052838] [ENSMUST00000165555]
Predicted Effect possibly damaging
Transcript: ENSMUST00000052838
AA Change: E818G

PolyPhen 2 Score 0.814 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000054428
Gene: ENSMUSG00000024294
AA Change: E818G

DomainStartEndE-ValueType
Pfam:MIB_HERC2 15 72 5.6e-21 PFAM
ZnF_ZZ 79 124 1.01e-10 SMART
Pfam:MIB_HERC2 154 219 4.9e-31 PFAM
ANK 430 460 1.63e3 SMART
ANK 463 492 2.1e-3 SMART
ANK 496 525 2.47e2 SMART
ANK 529 558 6.02e-4 SMART
ANK 562 591 1.14e-4 SMART
ANK 595 626 6.26e-2 SMART
ANK 631 661 1.24e-5 SMART
ANK 665 694 9.27e-5 SMART
ANK 698 729 1.04e2 SMART
RING 819 853 1.8e-1 SMART
RING 866 900 1.9e-1 SMART
RING 963 995 4.58e-4 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000124288
AA Change: E452G

PolyPhen 2 Score 0.244 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000114289
Gene: ENSMUSG00000024294
AA Change: E452G

DomainStartEndE-ValueType
ANK 65 95 1.63e3 SMART
ANK 98 127 2.1e-3 SMART
ANK 131 160 2.47e2 SMART
ANK 164 193 6.02e-4 SMART
ANK 197 226 1.14e-4 SMART
ANK 230 261 6.26e-2 SMART
ANK 266 296 1.24e-5 SMART
ANK 300 329 9.27e-5 SMART
ANK 333 364 1.04e2 SMART
RING 454 488 1.8e-1 SMART
RING 501 535 1.9e-1 SMART
RING 598 630 4.58e-4 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000150000
AA Change: E76G

PolyPhen 2 Score 0.090 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000122879
Gene: ENSMUSG00000024294
AA Change: E76G

DomainStartEndE-ValueType
Blast:ANK 2 27 5e-6 BLAST
RING 78 112 1.8e-1 SMART
RING 125 159 1.9e-1 SMART
RING 222 254 4.58e-4 SMART
Predicted Effect possibly damaging
Transcript: ENSMUST00000165555
AA Change: E818G

PolyPhen 2 Score 0.814 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000131712
Gene: ENSMUSG00000024294
AA Change: E818G

DomainStartEndE-ValueType
Pfam:MIB_HERC2 15 74 5.7e-25 PFAM
ZnF_ZZ 79 124 1.01e-10 SMART
Pfam:MIB_HERC2 154 221 5.5e-31 PFAM
ANK 430 460 1.63e3 SMART
ANK 463 492 2.1e-3 SMART
ANK 496 525 2.47e2 SMART
ANK 529 558 6.02e-4 SMART
ANK 562 591 1.14e-4 SMART
ANK 595 626 6.26e-2 SMART
ANK 631 661 1.24e-5 SMART
ANK 665 694 9.27e-5 SMART
ANK 698 729 1.04e2 SMART
RING 819 853 1.8e-1 SMART
RING 866 900 1.9e-1 SMART
RING 963 995 4.58e-4 SMART
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein containing multiple ankyrin repeats and RING finger domains that functions as an E3 ubiquitin ligase. The encoded protein positively regulates Notch signaling by ubiquitinating the Notch receptors, thereby facilitating their endocytosis. This protein may also promote the ubiquitination and degradation of death-associated protein kinase 1 (DAPK1). [provided by RefSeq, Jun 2013]
PHENOTYPE: Homozygous null mice display embryonic lethality during organogenesis, failure of heart looping, impaired angiogenesis and arterial specification, premature neuronal precursor differentiation, posterior truncation, and abnormal somitogenesis with loss ofposterior markers. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Akap10 A T 11: 61,893,476 D515E possibly damaging Het
Ankrd13b A T 11: 77,476,219 S9R probably damaging Het
Ano9 G A 7: 141,107,204 A374V probably damaging Het
Cdc45 C T 16: 18,798,729 M200I probably benign Het
Cep78 T A 19: 15,956,306 H636L probably benign Het
Chd2 A G 7: 73,493,456 V563A probably damaging Het
Cndp1 G T 18: 84,631,958 D203E probably damaging Het
Col16a1 G A 4: 130,053,530 probably benign Het
Copa T C 1: 172,102,218 V284A possibly damaging Het
Dlec1 A G 9: 119,147,120 T1656A probably benign Het
Dopey1 T C 9: 86,487,381 I89T probably damaging Het
Eif2ak4 T C 2: 118,388,814 S36P probably benign Het
Ep300 A T 15: 81,648,414 I1618F unknown Het
Fan1 G A 7: 64,372,993 L171F possibly damaging Het
Fancm A G 12: 65,088,305 T291A probably benign Het
Gm14325 T C 2: 177,832,986 K101R probably damaging Het
Hmx3 A T 7: 131,543,963 probably null Het
Htt G T 5: 34,803,793 V255L probably benign Het
L3mbtl3 C T 10: 26,344,176 probably null Het
Lmbr1l A G 15: 98,917,896 L9P probably damaging Het
Lyzl6 A T 11: 103,635,077 Y72* probably null Het
Neb T C 2: 52,160,703 T6405A probably damaging Het
Npas3 A G 12: 54,067,795 D482G probably benign Het
Nuak2 C A 1: 132,316,357 A43E probably damaging Het
Olfr1123 G A 2: 87,418,707 V220I probably benign Het
Olfr1242 T C 2: 89,493,457 Y285C probably damaging Het
Olfr1289 A T 2: 111,483,528 I33L probably benign Het
Olfr1434 T C 19: 12,283,842 S265P probably damaging Het
Pde11a C A 2: 75,991,239 A899S probably benign Het
Ppfibp2 A T 7: 107,746,422 I884F possibly damaging Het
Pus7l A G 15: 94,523,464 V655A probably benign Het
Rad51ap2 A G 12: 11,456,896 D273G probably damaging Het
Rc3h2 T C 2: 37,382,811 D751G probably benign Het
Sdk1 C T 5: 142,172,544 A1863V probably damaging Het
Spns3 T C 11: 72,529,577 Y361C probably damaging Het
Srp72 T A 5: 76,994,215 I372N probably damaging Het
Srrm1 G A 4: 135,325,104 P658L unknown Het
Tcf20 A G 15: 82,853,237 S1338P probably benign Het
Tcte1 G A 17: 45,539,886 V363I probably benign Het
Vmn1r42 T C 6: 89,845,425 K54R probably benign Het
Vps13b A G 15: 35,917,128 N3706S probably benign Het
Vwde T C 6: 13,192,614 Y430C probably damaging Het
Wdr55 A G 18: 36,763,382 E375G probably benign Het
Zfp959 G A 17: 55,895,956 probably benign Het
Other mutations in Mib1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00673:Mib1 APN 18 10798490 missense probably benign 0.02
IGL02300:Mib1 APN 18 10741016 missense probably damaging 1.00
IGL02701:Mib1 APN 18 10747357 missense probably damaging 0.98
IGL03002:Mib1 APN 18 10798356 missense possibly damaging 0.87
IGL03083:Mib1 APN 18 10752029 critical splice donor site probably null
PIT4466001:Mib1 UTSW 18 10775541 missense probably benign 0.01
PIT4468001:Mib1 UTSW 18 10798463 missense possibly damaging 0.86
R0496:Mib1 UTSW 18 10804773 missense probably benign
R1015:Mib1 UTSW 18 10726409 missense probably damaging 1.00
R1237:Mib1 UTSW 18 10768149 missense probably damaging 1.00
R1557:Mib1 UTSW 18 10798474 missense probably damaging 1.00
R1918:Mib1 UTSW 18 10740972 splice site probably null
R1952:Mib1 UTSW 18 10812077 missense possibly damaging 0.94
R1982:Mib1 UTSW 18 10812064 missense probably damaging 1.00
R2009:Mib1 UTSW 18 10812118 missense probably damaging 1.00
R2372:Mib1 UTSW 18 10812045 missense probably damaging 1.00
R2422:Mib1 UTSW 18 10751906 missense probably damaging 1.00
R2922:Mib1 UTSW 18 10760831 nonsense probably null
R2923:Mib1 UTSW 18 10760831 nonsense probably null
R2938:Mib1 UTSW 18 10752033 splice site probably benign
R3814:Mib1 UTSW 18 10763281 missense probably benign 0.09
R3858:Mib1 UTSW 18 10798409 missense possibly damaging 0.56
R4356:Mib1 UTSW 18 10751844 missense probably benign 0.03
R4357:Mib1 UTSW 18 10751844 missense probably benign 0.03
R4358:Mib1 UTSW 18 10751844 missense probably benign 0.03
R4406:Mib1 UTSW 18 10763289 missense probably damaging 1.00
R4497:Mib1 UTSW 18 10811985 missense possibly damaging 0.75
R4593:Mib1 UTSW 18 10768191 missense possibly damaging 0.89
R4623:Mib1 UTSW 18 10808086 missense probably benign 0.02
R5068:Mib1 UTSW 18 10793002 missense probably damaging 0.99
R5069:Mib1 UTSW 18 10793002 missense probably damaging 0.99
R5070:Mib1 UTSW 18 10793002 missense probably damaging 0.99
R5258:Mib1 UTSW 18 10795856 splice site probably null
R5322:Mib1 UTSW 18 10792975 missense probably damaging 1.00
R5589:Mib1 UTSW 18 10794488 missense probably benign 0.00
R5622:Mib1 UTSW 18 10794503 missense possibly damaging 0.90
R6401:Mib1 UTSW 18 10795802 missense probably benign
R6928:Mib1 UTSW 18 10802282 missense probably benign 0.02
R7242:Mib1 UTSW 18 10741011 missense probably damaging 1.00
R7870:Mib1 UTSW 18 10798446 missense possibly damaging 0.75
R7912:Mib1 UTSW 18 10778187 missense probably damaging 1.00
R7953:Mib1 UTSW 18 10798446 missense possibly damaging 0.75
R7993:Mib1 UTSW 18 10778187 missense probably damaging 1.00
Posted On2015-04-16