Incidental Mutation 'IGL02745:Bpifb4'
| ID |
306098 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Bpifb4
|
| Ensembl Gene |
ENSMUSG00000074665 |
| Gene Name |
BPI fold containing family B, member 4 |
| Synonyms |
Gm1006, LOC381399 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.049)
|
| Stock # |
IGL02745
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
153780137-153805772 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 153789141 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Leucine to Glutamine
at position 316
(L316Q)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000105381
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000099181]
[ENSMUST00000109757]
[ENSMUST00000109759]
|
| AlphaFold |
A2BGH0 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000099181
AA Change: L102Q
PolyPhen 2
Score 0.975 (Sensitivity: 0.76; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000096786
Gene: ENSMUSG00000074665
AA Change: L102Q
| Domain | Start | End | E-Value | Type |
|---|
|
BPI1
|
2 |
177 |
3.47e-25 |
SMART |
|
BPI2
|
201 |
403 |
3.62e-78 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000109757
AA Change: L316Q
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000105379
Gene: ENSMUSG00000074665
AA Change: L316Q
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
17 |
N/A |
INTRINSIC |
|
BPI1
|
171 |
391 |
1.23e-48 |
SMART |
|
BPI2
|
415 |
617 |
3.62e-78 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000109759
AA Change: L316Q
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000105381
Gene: ENSMUSG00000074665
AA Change: L316Q
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
17 |
N/A |
INTRINSIC |
|
BPI1
|
171 |
391 |
1.23e-48 |
SMART |
|
BPI2
|
415 |
617 |
3.62e-78 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000154281
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000155239
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 45 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| A4galt |
T |
C |
15: 83,112,282 (GRCm39) |
E167G |
probably benign |
Het |
| Aldh1a1 |
A |
G |
19: 20,614,028 (GRCm39) |
|
probably benign |
Het |
| Ankrd44 |
T |
C |
1: 54,805,950 (GRCm39) |
H152R |
probably damaging |
Het |
| C2cd5 |
A |
T |
6: 142,987,256 (GRCm39) |
L155I |
probably benign |
Het |
| Chrdl2 |
T |
A |
7: 99,670,170 (GRCm39) |
C98S |
probably damaging |
Het |
| Clnk |
A |
G |
5: 38,893,662 (GRCm39) |
S232P |
probably benign |
Het |
| Csf3 |
A |
G |
11: 98,593,303 (GRCm39) |
D140G |
probably damaging |
Het |
| Dnah7b |
T |
A |
1: 46,234,189 (GRCm39) |
|
probably benign |
Het |
| Fetub |
T |
C |
16: 22,756,676 (GRCm39) |
V259A |
probably damaging |
Het |
| Gga2 |
G |
T |
7: 121,607,592 (GRCm39) |
R108S |
probably damaging |
Het |
| Hip1r |
C |
A |
5: 124,129,002 (GRCm39) |
|
probably null |
Het |
| Hsd17b3 |
A |
G |
13: 64,234,990 (GRCm39) |
F62L |
probably benign |
Het |
| Krt16 |
A |
T |
11: 100,137,162 (GRCm39) |
|
probably benign |
Het |
| Man1a |
C |
T |
10: 53,853,206 (GRCm39) |
R304Q |
probably damaging |
Het |
| Med17 |
A |
G |
9: 15,176,642 (GRCm39) |
|
probably benign |
Het |
| Mrgprb4 |
T |
C |
7: 47,848,106 (GRCm39) |
Y274C |
probably damaging |
Het |
| Myh8 |
C |
T |
11: 67,188,327 (GRCm39) |
T996I |
possibly damaging |
Het |
| Niban3 |
G |
T |
8: 72,057,682 (GRCm39) |
|
probably null |
Het |
| Nlrp4e |
T |
A |
7: 23,020,716 (GRCm39) |
L401Q |
probably damaging |
Het |
| Oas1h |
G |
A |
5: 120,999,542 (GRCm39) |
R9Q |
probably benign |
Het |
| Or4c111 |
A |
G |
2: 88,844,232 (GRCm39) |
Y59H |
probably damaging |
Het |
| Or4d10b |
C |
T |
19: 12,036,565 (GRCm39) |
V184I |
probably benign |
Het |
| Or8g51 |
T |
C |
9: 38,609,494 (GRCm39) |
H56R |
probably damaging |
Het |
| Otor |
A |
G |
2: 142,923,076 (GRCm39) |
D122G |
possibly damaging |
Het |
| Pcdh18 |
T |
A |
3: 49,710,340 (GRCm39) |
Q325L |
probably damaging |
Het |
| Ppfibp1 |
T |
C |
6: 146,923,852 (GRCm39) |
|
probably benign |
Het |
| Pramel16 |
A |
T |
4: 143,677,294 (GRCm39) |
L95Q |
probably damaging |
Het |
| Prlr |
T |
A |
15: 10,328,680 (GRCm39) |
I385N |
possibly damaging |
Het |
| Rap1gds1 |
A |
G |
3: 138,662,002 (GRCm39) |
V418A |
probably damaging |
Het |
| Rdh1 |
A |
T |
10: 127,601,288 (GRCm39) |
T279S |
probably benign |
Het |
| Slc17a3 |
C |
A |
13: 24,026,469 (GRCm39) |
Q13K |
probably benign |
Het |
| Slc22a20 |
T |
C |
19: 6,022,901 (GRCm39) |
N414S |
probably damaging |
Het |
| Slc4a1 |
C |
A |
11: 102,247,093 (GRCm39) |
C498F |
probably damaging |
Het |
| Sp8 |
G |
A |
12: 118,813,326 (GRCm39) |
G394S |
probably damaging |
Het |
| Ssh2 |
C |
T |
11: 77,346,233 (GRCm39) |
T1406I |
probably damaging |
Het |
| Stra6 |
T |
A |
9: 58,059,321 (GRCm39) |
D561E |
probably damaging |
Het |
| Stxbp5l |
G |
A |
16: 37,007,016 (GRCm39) |
Q726* |
probably null |
Het |
| Synpo2 |
G |
A |
3: 122,907,261 (GRCm39) |
T685I |
probably damaging |
Het |
| Tasor2 |
A |
T |
13: 3,635,140 (GRCm39) |
S556T |
probably benign |
Het |
| Ttc27 |
A |
G |
17: 75,046,728 (GRCm39) |
D263G |
probably benign |
Het |
| Ttn |
G |
A |
2: 76,594,332 (GRCm39) |
P18793S |
possibly damaging |
Het |
| Vmn2r109 |
A |
G |
17: 20,761,512 (GRCm39) |
V615A |
probably damaging |
Het |
| Vmn2r76 |
T |
G |
7: 85,879,495 (GRCm39) |
K268N |
probably benign |
Het |
| Zeb2 |
A |
G |
2: 44,884,487 (GRCm39) |
|
probably benign |
Het |
| Zfp286 |
C |
A |
11: 62,671,700 (GRCm39) |
K124N |
probably damaging |
Het |
|
| Other mutations in Bpifb4 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01567:Bpifb4
|
APN |
2 |
153,789,198 (GRCm39) |
splice site |
probably benign |
|
|
IGL01641:Bpifb4
|
APN |
2 |
153,784,601 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
IGL01653:Bpifb4
|
APN |
2 |
153,786,703 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0106:Bpifb4
|
UTSW |
2 |
153,782,888 (GRCm39) |
missense |
probably benign |
0.02 |
|
R0309:Bpifb4
|
UTSW |
2 |
153,801,603 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R0561:Bpifb4
|
UTSW |
2 |
153,786,742 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0601:Bpifb4
|
UTSW |
2 |
153,789,203 (GRCm39) |
splice site |
probably benign |
|
|
R1937:Bpifb4
|
UTSW |
2 |
153,785,996 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R2433:Bpifb4
|
UTSW |
2 |
153,801,597 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R2679:Bpifb4
|
UTSW |
2 |
153,790,544 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R2896:Bpifb4
|
UTSW |
2 |
153,796,357 (GRCm39) |
splice site |
probably benign |
|
|
R4701:Bpifb4
|
UTSW |
2 |
153,792,305 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4772:Bpifb4
|
UTSW |
2 |
153,784,903 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R5403:Bpifb4
|
UTSW |
2 |
153,785,912 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5695:Bpifb4
|
UTSW |
2 |
153,784,843 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5894:Bpifb4
|
UTSW |
2 |
153,782,852 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
R6007:Bpifb4
|
UTSW |
2 |
153,784,480 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
R6302:Bpifb4
|
UTSW |
2 |
153,801,587 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6351:Bpifb4
|
UTSW |
2 |
153,799,054 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R6755:Bpifb4
|
UTSW |
2 |
153,799,658 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6796:Bpifb4
|
UTSW |
2 |
153,803,467 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6932:Bpifb4
|
UTSW |
2 |
153,784,547 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
R7489:Bpifb4
|
UTSW |
2 |
153,785,924 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7986:Bpifb4
|
UTSW |
2 |
153,799,650 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8826:Bpifb4
|
UTSW |
2 |
153,783,817 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9019:Bpifb4
|
UTSW |
2 |
153,790,607 (GRCm39) |
nonsense |
probably null |
|
|
RF061:Bpifb4
|
UTSW |
2 |
153,799,048 (GRCm39) |
critical splice acceptor site |
probably benign |
|
|
X0018:Bpifb4
|
UTSW |
2 |
153,785,981 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1176:Bpifb4
|
UTSW |
2 |
153,784,752 (GRCm39) |
missense |
probably benign |
0.33 |
|
| Posted On |
2015-04-16 |
Incidental Mutation