Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00163:Trgv3'

306584

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Trgv3

Ensembl Gene

ENSMUSG00000076750

Gene Name

T cell receptor gamma, variable 3

Synonyms

vgamma3, Tcrg-V3

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.053) question?

Stock #

IGL00163

Quality Score

Status

Chromosome

Chromosomal Location

19427015-19427471 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 19427381 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Asparagine at position 88 (S88N)

Ref Sequence

ENSEMBL: ENSMUSP00000142927 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000103559] [ENSMUST00000198663]

AlphaFold

A0A075B5Z1

Predicted Effect

probably benign
Transcript: ENSMUST00000103559
AA Change: S87N

PolyPhen 2 Score 0.440 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000100339
Gene: ENSMUSG00000076750
AA Change: S87N

Domain	Start	End	E-Value	Type
IGv	34	114	4.92e-12	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000198663
AA Change: S88N

PolyPhen 2 Score 0.440 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000142927
Gene: ENSMUSG00000076750
AA Change: S88N

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
IGv	35	115	2e-14	SMART

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930553M12Rik	G	A	4: 88,786,310 (GRCm39)	Q103*	probably null	Het
4933406P04Rik	C	A	10: 20,186,970 (GRCm39)		probably benign	Het
Adgrg6	T	C	10: 14,343,194 (GRCm39)	E251G	probably damaging	Het
Ago2	T	C	15: 72,998,302 (GRCm39)	H292R	probably benign	Het
Akr1c6	T	C	13: 4,498,977 (GRCm39)		probably benign	Het
Arhgap24	T	A	5: 103,008,265 (GRCm39)	M62K	possibly damaging	Het
Bicd1	A	G	6: 149,451,888 (GRCm39)	H834R	possibly damaging	Het
Ccdc77	G	T	6: 120,306,045 (GRCm39)		probably benign	Het
Cdadc1	G	T	14: 59,818,818 (GRCm39)	H337N	probably damaging	Het
Cep192	A	G	18: 68,013,871 (GRCm39)	T2424A	possibly damaging	Het
Cep78	T	C	19: 15,946,504 (GRCm39)	T443A	probably benign	Het
Chrna1	T	A	2: 73,400,986 (GRCm39)	E181D	probably benign	Het
Dmxl1	G	A	18: 49,984,534 (GRCm39)	D177N	probably damaging	Het
Eif3h	T	A	15: 51,650,195 (GRCm39)	I330F	probably damaging	Het
Fam184b	T	C	5: 45,697,091 (GRCm39)	E691G	probably benign	Het
Fastkd1	T	A	2: 69,537,893 (GRCm39)	S230C	probably benign	Het
Gipc2	T	C	3: 151,843,215 (GRCm39)	I141V	probably damaging	Het
Hsd17b2	A	T	8: 118,485,410 (GRCm39)	D291V	probably damaging	Het
Itpr2	G	A	6: 146,292,334 (GRCm39)	A420V	possibly damaging	Het
Jag1	C	T	2: 136,927,952 (GRCm39)		probably null	Het
Minar1	A	T	9: 89,473,150 (GRCm39)		probably benign	Het
Mmp1b	T	A	9: 7,387,946 (GRCm39)	Y16F	probably benign	Het
Muc4	G	T	16: 32,754,090 (GRCm38)	R1322M	probably benign	Het
Myo9b	T	C	8: 71,801,379 (GRCm39)	I1179T	probably benign	Het
Nos1ap	A	G	1: 170,342,175 (GRCm39)		probably benign	Het
Npc1l1	A	T	11: 6,174,199 (GRCm39)	V702E	probably damaging	Het
Or13d1	G	A	4: 52,971,058 (GRCm39)	V146M	possibly damaging	Het
Or1j21	A	G	2: 36,684,012 (GRCm39)	I255V	probably benign	Het
Or2ag17	T	A	7: 106,389,796 (GRCm39)	R137S	probably benign	Het
Or2y10	A	C	11: 49,454,747 (GRCm39)		probably benign	Het
Or4c31	A	T	2: 88,291,696 (GRCm39)	Y4F	probably benign	Het
Or4f7	A	C	2: 111,644,126 (GRCm39)		probably benign	Het
Osmr	A	T	15: 6,873,926 (GRCm39)	L157*	probably null	Het
Pdzph1	T	C	17: 59,281,791 (GRCm39)	T164A	possibly damaging	Het
Ptn	T	C	6: 36,720,424 (GRCm39)	K43E	probably benign	Het
Rbm45	T	C	2: 76,209,051 (GRCm39)	V340A	probably damaging	Het
Rnf5	C	T	17: 34,821,083 (GRCm39)	G83E	probably damaging	Het
Scin	G	T	12: 40,126,971 (GRCm39)	Q459K	probably benign	Het
Serpina5	C	A	12: 104,071,479 (GRCm39)	A362D	probably damaging	Het
Tex47	T	A	5: 7,355,468 (GRCm39)	Y216*	probably null	Het
Tll1	A	T	8: 64,469,170 (GRCm39)	H984Q	probably benign	Het
Tmem259	A	G	10: 79,815,568 (GRCm39)	V81A	probably benign	Het
Tns3	A	T	11: 8,401,066 (GRCm39)	S1077R	probably benign	Het
Ttc17	A	G	2: 94,153,428 (GRCm39)		probably benign	Het
Tubgcp2	T	C	7: 139,610,935 (GRCm39)	T149A	possibly damaging	Het
Ulk1	G	A	5: 110,935,738 (GRCm39)	A25V	probably damaging	Het
Vps13d	T	C	4: 144,895,110 (GRCm39)	E378G	probably damaging	Het
Vsig10	A	G	5: 117,476,479 (GRCm39)	N311S	probably benign	Het
Zfp511	T	C	7: 139,617,429 (GRCm39)	Y144H	possibly damaging	Het

Other mutations in Trgv3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02458:Trgv3	APN	13	19,427,423 (GRCm39)	missense	probably damaging	0.99
IGL03146:Trgv3	APN	13	19,427,337 (GRCm39)	nonsense	probably null
R6777:Trgv3	UTSW	13	19,427,450 (GRCm39)	missense	probably damaging	1.00
R7275:Trgv3	UTSW	13	19,427,188 (GRCm39)	missense	probably benign	0.20
R7491:Trgv3	UTSW	13	19,427,016 (GRCm39)	start codon destroyed	probably null	0.99
R8434:Trgv3	UTSW	13	19,427,036 (GRCm39)	missense	probably benign
R8965:Trgv3	UTSW	13	19,427,180 (GRCm39)	missense	probably damaging	1.00
R9307:Trgv3	UTSW	13	19,427,441 (GRCm39)	missense	probably damaging	0.99

Posted On

2015-04-16