Incidental Mutation 'R3914:Ccdc174'
ID 309554
Institutional Source Beutler Lab
Gene Symbol Ccdc174
Ensembl Gene ENSMUSG00000034083
Gene Name coiled-coil domain containing 174
Synonyms C130022K22Rik
MMRRC Submission 040912-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R3914 (G1)
Quality Score 225
Status Validated
Chromosome 6
Chromosomal Location 91855034-91876824 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to T at 91876338 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Alanine to Serine at position 392 (A392S)
Ref Sequence ENSEMBL: ENSMUSP00000049280 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000037783] [ENSMUST00000136090] [ENSMUST00000205686]
AlphaFold no structure available at present
Predicted Effect possibly damaging
Transcript: ENSMUST00000037783
AA Change: A392S

PolyPhen 2 Score 0.705 (Sensitivity: 0.86; Specificity: 0.92)
SMART Domains Protein: ENSMUSP00000049280
Gene: ENSMUSG00000034083
AA Change: A392S

low complexity region 21 36 N/A INTRINSIC
coiled coil region 64 98 N/A INTRINSIC
low complexity region 137 152 N/A INTRINSIC
Pfam:DUF4078 215 303 4.4e-32 PFAM
low complexity region 323 340 N/A INTRINSIC
low complexity region 423 446 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000136090
Predicted Effect noncoding transcript
Transcript: ENSMUST00000147188
Predicted Effect noncoding transcript
Transcript: ENSMUST00000151378
Predicted Effect probably benign
Transcript: ENSMUST00000205686
Predicted Effect noncoding transcript
Transcript: ENSMUST00000205974
Meta Mutation Damage Score 0.0699 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.4%
  • 20x: 95.4%
Validation Efficiency 100% (36/36)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is found in the nucleus, where it interacts with eukaryotic translation initiation factor 4A, isoform 3. The encoded protein appears to be a part of the exon junction complex, which is involved in RNA processing, translation, and nonsense-mediated mRNA decay. A mutation in this gene has been associated with infantile hypotonia with psychomotor retardation. [provided by RefSeq, Mar 2016]
PHENOTYPE: Mice homozygous for a transgenic gene disruption may exhibit embryonic lethality at E7. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 36 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Atp8b2 A T 3: 89,861,755 (GRCm39) I266N probably damaging Het
AU041133 G A 10: 81,987,649 (GRCm39) R434Q probably damaging Het
Cdh18 T C 15: 23,410,771 (GRCm39) Y419H probably damaging Het
Col20a1 A G 2: 180,640,285 (GRCm39) K509R probably benign Het
Csmd2 A T 4: 128,215,117 (GRCm39) D513V probably benign Het
Disp1 A G 1: 182,870,666 (GRCm39) F585L probably benign Het
Entpd7 G A 19: 43,679,597 (GRCm39) R50Q probably benign Het
Exoc1 G A 5: 76,691,408 (GRCm39) S244N possibly damaging Het
Fam234b A G 6: 135,202,681 (GRCm39) D345G probably damaging Het
G530012D18Rik CAGAGAGA CAGAGAGAGA 1: 85,504,945 (GRCm39) probably null Het
Gprc6a T A 10: 51,504,371 (GRCm39) M158L probably benign Het
Hdc T C 2: 126,444,926 (GRCm39) T255A probably damaging Het
Hps5 T C 7: 46,432,950 (GRCm39) T257A probably damaging Het
Ice1 A G 13: 70,754,203 (GRCm39) C628R probably benign Het
Igkv2-137 A T 6: 67,532,968 (GRCm39) R44W probably damaging Het
Islr2 A T 9: 58,105,666 (GRCm39) Y531* probably null Het
Mast4 G A 13: 102,875,829 (GRCm39) R1112* probably null Het
Mrc2 T C 11: 105,238,058 (GRCm39) probably benign Het
Myo19 G A 11: 84,785,429 (GRCm39) R224H probably damaging Het
Nup58 A G 14: 60,469,596 (GRCm39) M375T possibly damaging Het
Phaf1 A G 8: 105,966,615 (GRCm39) N121D probably benign Het
Phldb2 T C 16: 45,577,526 (GRCm39) E1133G probably damaging Het
Rabl6 T C 2: 25,478,718 (GRCm39) T238A possibly damaging Het
Ranbp17 G A 11: 33,429,189 (GRCm39) A352V probably benign Het
Riok3 A G 18: 12,281,879 (GRCm39) I283V probably benign Het
Rrm1 A G 7: 102,106,381 (GRCm39) Y300C probably damaging Het
Shoc1 T A 4: 59,094,201 (GRCm39) R174S possibly damaging Het
Sipa1l3 T C 7: 29,099,510 (GRCm39) D253G probably benign Het
Slc22a8 T A 19: 8,585,550 (GRCm39) I305N probably damaging Het
Slc26a3 A T 12: 31,503,905 (GRCm39) E303D probably benign Het
Slc32a1 C T 2: 158,453,152 (GRCm39) probably benign Het
Tars3 C A 7: 65,333,556 (GRCm39) Q585K probably benign Het
Ttn T A 2: 76,585,168 (GRCm39) I22042F probably damaging Het
Ubqlnl A G 7: 103,798,813 (GRCm39) V228A probably benign Het
Wnt7b T A 15: 85,422,059 (GRCm39) D201V possibly damaging Het
Xpot A T 10: 121,440,443 (GRCm39) I596N possibly damaging Het
Other mutations in Ccdc174
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01633:Ccdc174 APN 6 91,857,343 (GRCm39) critical splice donor site probably null
IGL02391:Ccdc174 APN 6 91,875,263 (GRCm39) missense possibly damaging 0.72
IGL02619:Ccdc174 APN 6 91,876,538 (GRCm39) missense possibly damaging 0.70
IGL02698:Ccdc174 APN 6 91,867,834 (GRCm39) missense probably benign
R0482:Ccdc174 UTSW 6 91,872,247 (GRCm39) missense probably benign 0.08
R0612:Ccdc174 UTSW 6 91,867,873 (GRCm39) splice site probably benign
R0801:Ccdc174 UTSW 6 91,872,313 (GRCm39) missense possibly damaging 0.72
R1124:Ccdc174 UTSW 6 91,876,561 (GRCm39) missense probably benign 0.33
R1237:Ccdc174 UTSW 6 91,867,768 (GRCm39) splice site probably benign
R1388:Ccdc174 UTSW 6 91,858,225 (GRCm39) splice site probably null
R2176:Ccdc174 UTSW 6 91,865,070 (GRCm39) missense probably benign 0.01
R4342:Ccdc174 UTSW 6 91,862,337 (GRCm39) nonsense probably null
R4775:Ccdc174 UTSW 6 91,867,875 (GRCm39) splice site probably null
R4880:Ccdc174 UTSW 6 91,876,572 (GRCm39) unclassified probably benign
R5579:Ccdc174 UTSW 6 91,858,331 (GRCm39) splice site probably null
R5787:Ccdc174 UTSW 6 91,858,291 (GRCm39) nonsense probably null
R5869:Ccdc174 UTSW 6 91,862,399 (GRCm39) utr 3 prime probably benign
R6277:Ccdc174 UTSW 6 91,857,272 (GRCm39) missense probably damaging 1.00
R8492:Ccdc174 UTSW 6 91,865,138 (GRCm39) missense probably benign 0.03
RF008:Ccdc174 UTSW 6 91,876,347 (GRCm39) missense possibly damaging 0.73
Predicted Primers PCR Primer

Sequencing Primer
Posted On 2015-04-17