Incidental Mutation 'R3884:Lyg2'
ID310571
Institutional Source Beutler Lab
Gene Symbol Lyg2
Ensembl Gene ENSMUSG00000061584
Gene Namelysozyme G-like 2
SynonymsLOC332427
MMRRC Submission 040797-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.053) question?
Stock #R3884 (G1)
Quality Score225
Status Not validated
Chromosome1
Chromosomal Location37905923-37916493 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to G at 37910069 bp
ZygosityHeterozygous
Amino Acid Change Alanine to Proline at position 71 (A71P)
Ref Sequence ENSEMBL: ENSMUSP00000077422 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000078307]
Predicted Effect probably damaging
Transcript: ENSMUST00000078307
AA Change: A71P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000077422
Gene: ENSMUSG00000061584
AA Change: A71P

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
SCOP:d153l__ 39 213 5e-45 SMART
PDB:1LSP|A 40 213 2e-56 PDB
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.6%
  • 20x: 95.9%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene contains a SLT domain, a protein domain present in bacterial lytic transglycosylase (SLT) and in eukaryotic lysozymes (GEWL). SLT domain catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyglucosamine (GlcNAc). [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 37 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adcy6 G A 15: 98,597,174 S719F probably benign Het
Als2 A G 1: 59,185,568 V998A probably damaging Het
Ankmy1 T G 1: 92,886,152 E435A probably damaging Het
Ankrd52 A G 10: 128,388,955 E820G probably damaging Het
Arsi G A 18: 60,916,651 G202E probably benign Het
Atp6v0d2 T A 4: 19,910,677 D71V probably damaging Het
C3 T C 17: 57,217,173 probably null Het
Cnot7 A T 8: 40,510,130 M1K probably null Het
Cntn2 A G 1: 132,528,939 V123A probably damaging Het
Depdc5 G A 5: 32,944,077 E904K probably damaging Het
Dip2c G T 13: 9,551,858 L284F probably damaging Het
Epb41l3 C T 17: 69,274,116 R552* probably null Het
Gabra4 T C 5: 71,657,257 D40G probably benign Het
Gm9925 T C 18: 74,065,328 probably benign Het
Igf2r T A 17: 12,709,468 Q996L probably benign Het
Klk1b16 T C 7: 44,139,463 V40A possibly damaging Het
Lin9 G T 1: 180,688,065 G427* probably null Het
Lsmem1 GTACATACATACATACATACATACATACA GTACATACATACATACATACATACA 12: 40,185,261 probably null Het
Mycbp2 A C 14: 103,295,250 L390V probably damaging Het
Myl3 A G 9: 110,767,959 H129R probably damaging Het
Naa16 T C 14: 79,343,262 K604R probably damaging Het
Nedd4 C T 9: 72,725,077 P398S probably benign Het
Neurl1a T C 19: 47,253,446 V309A probably benign Het
Olfr714 A T 7: 107,073,903 Q25L possibly damaging Het
Olfr800 T C 10: 129,660,538 V244A probably damaging Het
Pacs1 T C 19: 5,155,759 Y301C probably damaging Het
Parl A T 16: 20,283,012 M90K probably damaging Het
Plxnc1 A T 10: 94,910,687 probably null Het
Prkd2 C A 7: 16,853,255 S375R probably benign Het
Prss44 T C 9: 110,814,696 I136T possibly damaging Het
Rock1 G A 18: 10,122,768 T351I probably damaging Het
Selenon T C 4: 134,539,770 N507S possibly damaging Het
Slc38a7 C T 8: 95,846,181 G141R probably damaging Het
Trpm4 C T 7: 45,321,998 probably null Het
Ttn T A 2: 76,730,361 N27486I probably damaging Het
Xylb T C 9: 119,380,687 M346T probably damaging Het
Zbtb17 T C 4: 141,464,575 F306L probably damaging Het
Other mutations in Lyg2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02834:Lyg2 APN 1 37909967 missense probably damaging 1.00
IGL03079:Lyg2 APN 1 37907646 missense possibly damaging 0.90
IGL03123:Lyg2 APN 1 37915764 utr 5 prime probably benign
R0543:Lyg2 UTSW 1 37911107 missense possibly damaging 0.94
R2250:Lyg2 UTSW 1 37915735 missense probably benign 0.25
R2258:Lyg2 UTSW 1 37908996 missense probably benign 0.00
R4807:Lyg2 UTSW 1 37911067 missense possibly damaging 0.54
R5991:Lyg2 UTSW 1 37915719 critical splice donor site probably null
R6328:Lyg2 UTSW 1 37911113 missense probably benign 0.33
R7439:Lyg2 UTSW 1 37911137 missense possibly damaging 0.46
Predicted Primers PCR Primer
(F):5'- TGCATCAAGCCAAACCTCTG -3'
(R):5'- TAGCCGTTTGCAAAGCTGG -3'

Sequencing Primer
(F):5'- AGCCAAACCTCTGCCCCTTATG -3'
(R):5'- TCAATGCAGCATCTTGGCAG -3'
Posted On2015-04-17