Incidental Mutation 'R3970:Zfp219'
ID 310939
Institutional Source Beutler Lab
Gene Symbol Zfp219
Ensembl Gene ENSMUSG00000049295
Gene Name zinc finger protein 219
Synonyms 2010302A17Rik
MMRRC Submission 040938-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R3970 (G1)
Quality Score 225
Status Validated
Chromosome 14
Chromosomal Location 52243534-52258190 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 52244421 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamine to Leucine at position 541 (Q541L)
Ref Sequence ENSEMBL: ENSMUSP00000153966 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000067549] [ENSMUST00000093813] [ENSMUST00000100639] [ENSMUST00000166169] [ENSMUST00000182061] [ENSMUST00000226522] [ENSMUST00000182760] [ENSMUST00000182909] [ENSMUST00000183208] [ENSMUST00000226527] [ENSMUST00000182905] [ENSMUST00000228580] [ENSMUST00000228747] [ENSMUST00000226964] [ENSMUST00000228162] [ENSMUST00000226605] [ENSMUST00000226554] [ENSMUST00000228051]
AlphaFold Q6IQX8
Predicted Effect probably benign
Transcript: ENSMUST00000067549
AA Change: Q586L

PolyPhen 2 Score 0.031 (Sensitivity: 0.95; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000068184
Gene: ENSMUSG00000049295
AA Change: Q586L

DomainStartEndE-ValueType
low complexity region 30 47 N/A INTRINSIC
ZnF_C2H2 61 83 6.23e-2 SMART
ZnF_C2H2 89 111 4.17e-3 SMART
low complexity region 113 146 N/A INTRINSIC
ZnF_C2H2 167 190 3.07e-1 SMART
ZnF_C2H2 193 216 1.51e0 SMART
low complexity region 229 276 N/A INTRINSIC
ZnF_C2H2 277 299 8.47e-4 SMART
ZnF_C2H2 305 327 1.38e-3 SMART
low complexity region 331 350 N/A INTRINSIC
low complexity region 354 379 N/A INTRINSIC
low complexity region 427 441 N/A INTRINSIC
ZnF_C2H2 501 523 3.63e-3 SMART
ZnF_C2H2 529 551 1.58e-3 SMART
low complexity region 560 570 N/A INTRINSIC
low complexity region 594 611 N/A INTRINSIC
low complexity region 637 648 N/A INTRINSIC
ZnF_C2H2 650 672 2.82e0 SMART
low complexity region 675 684 N/A INTRINSIC
low complexity region 695 714 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000093813
SMART Domains Protein: ENSMUSP00000091331
Gene: ENSMUSG00000004562

DomainStartEndE-ValueType
low complexity region 201 223 N/A INTRINSIC
low complexity region 306 320 N/A INTRINSIC
low complexity region 332 345 N/A INTRINSIC
low complexity region 351 395 N/A INTRINSIC
low complexity region 451 472 N/A INTRINSIC
low complexity region 550 564 N/A INTRINSIC
low complexity region 581 606 N/A INTRINSIC
low complexity region 773 792 N/A INTRINSIC
low complexity region 885 914 N/A INTRINSIC
low complexity region 958 996 N/A INTRINSIC
Pfam:RhoGEF 1087 1246 6.1e-9 PFAM
PH 1264 1372 3.97e-8 SMART
low complexity region 1403 1424 N/A INTRINSIC
low complexity region 1478 1491 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000100639
SMART Domains Protein: ENSMUSP00000098204
Gene: ENSMUSG00000004562

DomainStartEndE-ValueType
low complexity region 201 223 N/A INTRINSIC
low complexity region 306 320 N/A INTRINSIC
low complexity region 332 345 N/A INTRINSIC
low complexity region 351 395 N/A INTRINSIC
low complexity region 451 472 N/A INTRINSIC
low complexity region 550 564 N/A INTRINSIC
low complexity region 581 606 N/A INTRINSIC
low complexity region 773 792 N/A INTRINSIC
low complexity region 885 914 N/A INTRINSIC
low complexity region 958 996 N/A INTRINSIC
Pfam:RhoGEF 1087 1246 5.9e-9 PFAM
PH 1264 1372 3.97e-8 SMART
low complexity region 1430 1443 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000166169
AA Change: Q586L

PolyPhen 2 Score 0.031 (Sensitivity: 0.95; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000126854
Gene: ENSMUSG00000049295
AA Change: Q586L

DomainStartEndE-ValueType
low complexity region 30 47 N/A INTRINSIC
ZnF_C2H2 61 83 6.23e-2 SMART
ZnF_C2H2 89 111 4.17e-3 SMART
low complexity region 113 146 N/A INTRINSIC
ZnF_C2H2 167 190 3.07e-1 SMART
ZnF_C2H2 193 216 1.51e0 SMART
low complexity region 229 276 N/A INTRINSIC
ZnF_C2H2 277 299 8.47e-4 SMART
ZnF_C2H2 305 327 1.38e-3 SMART
low complexity region 331 350 N/A INTRINSIC
low complexity region 354 379 N/A INTRINSIC
low complexity region 427 441 N/A INTRINSIC
ZnF_C2H2 501 523 3.63e-3 SMART
ZnF_C2H2 529 551 1.58e-3 SMART
low complexity region 560 570 N/A INTRINSIC
low complexity region 594 611 N/A INTRINSIC
low complexity region 637 648 N/A INTRINSIC
ZnF_C2H2 650 672 2.82e0 SMART
low complexity region 675 684 N/A INTRINSIC
low complexity region 695 714 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000182061
SMART Domains Protein: ENSMUSP00000138128
Gene: ENSMUSG00000004562

DomainStartEndE-ValueType
low complexity region 201 223 N/A INTRINSIC
low complexity region 306 320 N/A INTRINSIC
low complexity region 332 345 N/A INTRINSIC
low complexity region 351 395 N/A INTRINSIC
low complexity region 451 472 N/A INTRINSIC
low complexity region 550 564 N/A INTRINSIC
low complexity region 581 606 N/A INTRINSIC
low complexity region 773 792 N/A INTRINSIC
low complexity region 885 914 N/A INTRINSIC
low complexity region 958 996 N/A INTRINSIC
Pfam:RhoGEF 1087 1247 3.7e-9 PFAM
PH 1264 1372 3.97e-8 SMART
low complexity region 1430 1443 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000182217
Predicted Effect noncoding transcript
Transcript: ENSMUST00000182504
Predicted Effect noncoding transcript
Transcript: ENSMUST00000182931
Predicted Effect noncoding transcript
Transcript: ENSMUST00000182777
Predicted Effect noncoding transcript
Transcript: ENSMUST00000183213
Predicted Effect noncoding transcript
Transcript: ENSMUST00000182644
Predicted Effect noncoding transcript
Transcript: ENSMUST00000183022
Predicted Effect probably benign
Transcript: ENSMUST00000226522
AA Change: Q586L

PolyPhen 2 Score 0.031 (Sensitivity: 0.95; Specificity: 0.82)
Predicted Effect noncoding transcript
Transcript: ENSMUST00000226474
Predicted Effect probably benign
Transcript: ENSMUST00000182760
SMART Domains Protein: ENSMUSP00000138125
Gene: ENSMUSG00000004562

DomainStartEndE-ValueType
low complexity region 201 223 N/A INTRINSIC
low complexity region 306 320 N/A INTRINSIC
low complexity region 332 345 N/A INTRINSIC
low complexity region 351 395 N/A INTRINSIC
low complexity region 451 472 N/A INTRINSIC
low complexity region 550 564 N/A INTRINSIC
low complexity region 581 606 N/A INTRINSIC
low complexity region 782 801 N/A INTRINSIC
low complexity region 894 923 N/A INTRINSIC
low complexity region 967 1005 N/A INTRINSIC
Pfam:RhoGEF 1096 1256 5.9e-9 PFAM
PH 1273 1381 3.97e-8 SMART
low complexity region 1412 1433 N/A INTRINSIC
low complexity region 1487 1500 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000182828
Predicted Effect probably benign
Transcript: ENSMUST00000182909
SMART Domains Protein: ENSMUSP00000138635
Gene: ENSMUSG00000004562

DomainStartEndE-ValueType
low complexity region 201 223 N/A INTRINSIC
low complexity region 306 320 N/A INTRINSIC
low complexity region 332 345 N/A INTRINSIC
low complexity region 351 395 N/A INTRINSIC
low complexity region 451 472 N/A INTRINSIC
low complexity region 550 564 N/A INTRINSIC
low complexity region 581 606 N/A INTRINSIC
low complexity region 773 792 N/A INTRINSIC
low complexity region 885 914 N/A INTRINSIC
low complexity region 958 996 N/A INTRINSIC
Pfam:RhoGEF 1087 1247 3.9e-9 PFAM
PH 1264 1372 3.97e-8 SMART
low complexity region 1403 1424 N/A INTRINSIC
low complexity region 1478 1491 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000183208
SMART Domains Protein: ENSMUSP00000138354
Gene: ENSMUSG00000004562

DomainStartEndE-ValueType
low complexity region 201 223 N/A INTRINSIC
low complexity region 306 320 N/A INTRINSIC
low complexity region 332 345 N/A INTRINSIC
low complexity region 351 395 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000182667
Predicted Effect probably benign
Transcript: ENSMUST00000226527
Predicted Effect probably benign
Transcript: ENSMUST00000182905
SMART Domains Protein: ENSMUSP00000138797
Gene: ENSMUSG00000004562

DomainStartEndE-ValueType
low complexity region 201 223 N/A INTRINSIC
low complexity region 306 320 N/A INTRINSIC
low complexity region 332 345 N/A INTRINSIC
low complexity region 351 395 N/A INTRINSIC
low complexity region 451 472 N/A INTRINSIC
low complexity region 550 564 N/A INTRINSIC
low complexity region 581 606 N/A INTRINSIC
low complexity region 773 792 N/A INTRINSIC
low complexity region 885 914 N/A INTRINSIC
low complexity region 958 996 N/A INTRINSIC
SCOP:d1kz7a1 1073 1162 4e-7 SMART
Blast:RhoGEF 1087 1157 1e-8 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000228580
AA Change: Q541L

PolyPhen 2 Score 0.052 (Sensitivity: 0.94; Specificity: 0.83)
Predicted Effect probably benign
Transcript: ENSMUST00000228747
Predicted Effect probably benign
Transcript: ENSMUST00000226964
Predicted Effect probably benign
Transcript: ENSMUST00000228162
Predicted Effect probably benign
Transcript: ENSMUST00000226605
Predicted Effect probably benign
Transcript: ENSMUST00000226554
Predicted Effect probably benign
Transcript: ENSMUST00000228051
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.1%
  • 20x: 94.4%
Validation Efficiency 96% (53/55)
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2510039O18Rik T C 4: 148,029,779 (GRCm39) M583T probably damaging Het
Actn4 T C 7: 28,661,457 (GRCm39) K51R probably benign Het
Adamts15 T C 9: 30,821,898 (GRCm39) Y513C probably benign Het
Akap13 T A 7: 75,219,699 (GRCm39) L34* probably null Het
Akap6 A T 12: 53,188,236 (GRCm39) K1883N probably damaging Het
Ano1 T C 7: 144,161,700 (GRCm39) N749D probably benign Het
Armcx6 G T X: 133,650,505 (GRCm39) H109N possibly damaging Het
Camk4 T A 18: 33,312,634 (GRCm39) I258N possibly damaging Het
Cdhr2 A T 13: 54,874,271 (GRCm39) N781I probably damaging Het
Cherp T C 8: 73,223,795 (GRCm39) H196R possibly damaging Het
Chia1 T G 3: 106,028,951 (GRCm39) probably null Het
Col11a1 A T 3: 113,890,838 (GRCm39) T392S unknown Het
Commd9 C A 2: 101,727,486 (GRCm39) N93K probably benign Het
Csf2rb T C 15: 78,225,667 (GRCm39) V286A probably benign Het
Dnah17 G A 11: 117,931,984 (GRCm39) probably benign Het
E2f1 C G 2: 154,405,942 (GRCm39) G144R probably damaging Het
Fcho2 A T 13: 98,871,564 (GRCm39) S551T probably benign Het
Flna A T X: 73,279,273 (GRCm39) V1253E probably damaging Het
Gm12185 A T 11: 48,798,172 (GRCm39) C774S probably benign Het
Gm14401 T C 2: 176,778,789 (GRCm39) Y292H possibly damaging Het
Insyn2b A T 11: 34,369,739 (GRCm39) Q481L probably damaging Het
Kif5c A G 2: 49,578,756 (GRCm39) E128G probably damaging Het
Lama3 A T 18: 12,713,398 (GRCm39) K3230M probably damaging Het
Myof C T 19: 37,889,711 (GRCm39) V1287M probably damaging Het
Myof T G 19: 38,011,058 (GRCm39) D60A possibly damaging Het
Myrf A G 19: 10,200,601 (GRCm39) L332P probably damaging Het
Nampt T A 12: 32,883,095 (GRCm39) D93E probably benign Het
Narf A T 11: 121,129,247 (GRCm39) E10D possibly damaging Het
Nlrp6 C A 7: 140,501,568 (GRCm39) A45E probably damaging Het
Obscn G A 11: 58,942,488 (GRCm39) P4898L probably damaging Het
Or8c11 T C 9: 38,289,222 (GRCm39) V15A probably damaging Het
Pabpc5 A G X: 118,838,321 (GRCm39) E212G probably benign Het
Pcdh8 C T 14: 80,007,706 (GRCm39) G286S possibly damaging Het
Pcdha2 C A 18: 37,073,750 (GRCm39) Y460* probably null Het
Pcdhga4 G T 18: 37,820,654 (GRCm39) L734F possibly damaging Het
Pecr G A 1: 72,315,468 (GRCm39) T94I probably damaging Het
Piezo2 A T 18: 63,144,767 (GRCm39) V2776E probably damaging Het
Pign A C 1: 105,583,728 (GRCm39) S125A probably damaging Het
Pik3r2 G A 8: 71,223,065 (GRCm39) R452C probably benign Het
Pkd1l1 C T 11: 8,824,218 (GRCm39) E1566K probably damaging Het
Plcb2 A G 2: 118,546,171 (GRCm39) probably benign Het
Ppl T C 16: 4,918,196 (GRCm39) probably null Het
Pramel4 A T 4: 143,795,044 (GRCm39) N477I possibly damaging Het
Psd C T 19: 46,312,845 (GRCm39) R175H probably benign Het
Sema3g T C 14: 30,948,478 (GRCm39) probably null Het
Sf3b1 G A 1: 55,051,341 (GRCm39) R196* probably null Het
Slc26a4 G T 12: 31,578,686 (GRCm39) H656N probably damaging Het
Slc6a7 A C 18: 61,136,417 (GRCm39) L328R possibly damaging Het
Stab2 T C 10: 86,714,750 (GRCm39) T139A probably damaging Het
Tiam2 T A 17: 3,479,106 (GRCm39) I613N probably damaging Het
Tlk1 A G 2: 70,546,996 (GRCm39) V695A probably damaging Het
Trpc2 A G 7: 101,733,531 (GRCm39) D160G probably damaging Het
Uhrf2 T C 19: 30,057,315 (GRCm39) V491A probably damaging Het
Vwa7 G A 17: 35,236,684 (GRCm39) A84T probably damaging Het
Other mutations in Zfp219
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02134:Zfp219 APN 14 52,246,758 (GRCm39) missense probably damaging 1.00
Bart UTSW 14 52,244,163 (GRCm39) missense probably damaging 0.99
Bert UTSW 14 52,244,395 (GRCm39) missense probably benign 0.02
R0019:Zfp219 UTSW 14 52,246,485 (GRCm39) missense probably damaging 1.00
R0103:Zfp219 UTSW 14 52,244,163 (GRCm39) missense probably damaging 0.99
R0811:Zfp219 UTSW 14 52,244,395 (GRCm39) missense probably benign 0.02
R0812:Zfp219 UTSW 14 52,244,395 (GRCm39) missense probably benign 0.02
R1677:Zfp219 UTSW 14 52,246,512 (GRCm39) missense probably damaging 1.00
R1773:Zfp219 UTSW 14 52,244,563 (GRCm39) missense probably damaging 0.99
R1921:Zfp219 UTSW 14 52,245,691 (GRCm39) missense probably benign 0.00
R2929:Zfp219 UTSW 14 52,246,436 (GRCm39) missense probably benign 0.00
R4485:Zfp219 UTSW 14 52,244,841 (GRCm39) missense probably damaging 0.99
R5020:Zfp219 UTSW 14 52,247,112 (GRCm39) missense probably damaging 1.00
R5206:Zfp219 UTSW 14 52,247,022 (GRCm39) missense probably benign 0.40
R5244:Zfp219 UTSW 14 52,245,999 (GRCm39) missense possibly damaging 0.64
R5907:Zfp219 UTSW 14 52,244,606 (GRCm39) critical splice acceptor site probably null
R6903:Zfp219 UTSW 14 52,244,118 (GRCm39) missense probably benign 0.31
R7409:Zfp219 UTSW 14 52,244,570 (GRCm39) nonsense probably null
R8725:Zfp219 UTSW 14 52,244,899 (GRCm39) missense possibly damaging 0.58
R8937:Zfp219 UTSW 14 52,244,224 (GRCm39) missense probably damaging 0.98
R9135:Zfp219 UTSW 14 52,244,598 (GRCm39) missense probably damaging 1.00
R9157:Zfp219 UTSW 14 52,246,200 (GRCm39) missense probably damaging 0.99
R9203:Zfp219 UTSW 14 52,246,405 (GRCm39) missense probably damaging 0.98
R9297:Zfp219 UTSW 14 52,246,494 (GRCm39) missense probably damaging 0.98
R9313:Zfp219 UTSW 14 52,246,200 (GRCm39) missense probably damaging 0.99
R9717:Zfp219 UTSW 14 52,247,049 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- ATGCAAGGCCATGAGCTCAG -3'
(R):5'- TGTCCACACTGCGACTATGC -3'

Sequencing Primer
(F):5'- TCAGGAGCTCCAGTGGCAAAG -3'
(R):5'- ACTATGCAGGTACCCAGTCG -3'
Posted On 2015-04-29