Incidental Mutation 'R4007:Dhx37'
| ID |
311517 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Dhx37
|
| Ensembl Gene |
ENSMUSG00000029480 |
| Gene Name |
DEAH-box helicase 37 |
| Synonyms |
LOC208144, LOC381671 |
| MMRRC Submission |
041610-MU
|
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.466)
|
| Stock # |
R4007 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
5 |
| Chromosomal Location |
125490922-125511185 bp(-) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
G to A
at 125501995 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000169485]
|
| AlphaFold |
Q6NZL1 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000169485
|
| SMART Domains |
Protein: ENSMUSP00000131734
Gene: ENSMUSG00000029480
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
51 |
66 |
N/A |
INTRINSIC |
|
low complexity region
|
156 |
173 |
N/A |
INTRINSIC |
|
low complexity region
|
199 |
231 |
N/A |
INTRINSIC |
|
DEXDc
|
246 |
438 |
3.55e-27 |
SMART |
|
AAA
|
263 |
463 |
9.3e-3 |
SMART |
|
HELICc
|
554 |
669 |
1.56e-14 |
SMART |
|
Blast:DEXDc
|
678 |
717 |
1e-10 |
BLAST |
|
HA2
|
729 |
852 |
3.32e-25 |
SMART |
|
Pfam:OB_NTP_bind
|
886 |
1004 |
1.1e-25 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000198746
|
| Meta Mutation Damage Score |
0.0898 |
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.5%
- 10x: 96.9%
- 20x: 93.8%
|
| Validation Efficiency |
98% (49/50) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a DEAD box protein. DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 47 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| A1cf |
T |
C |
19: 31,895,524 (GRCm39) |
|
probably null |
Het |
| Aff1 |
A |
T |
5: 103,932,088 (GRCm39) |
K243N |
probably benign |
Het |
| Aknad1 |
T |
C |
3: 108,682,598 (GRCm39) |
I558T |
probably benign |
Het |
| Ampd1 |
A |
G |
3: 102,999,776 (GRCm39) |
I460V |
probably damaging |
Het |
| Atp10b |
A |
T |
11: 43,150,679 (GRCm39) |
H1459L |
probably benign |
Het |
| Card9 |
T |
A |
2: 26,243,012 (GRCm39) |
R459W |
possibly damaging |
Het |
| Chd3 |
A |
T |
11: 69,239,827 (GRCm39) |
I1667N |
probably benign |
Het |
| Col6a3 |
A |
G |
1: 90,730,291 (GRCm39) |
S1672P |
probably damaging |
Het |
| Cul4a |
A |
G |
8: 13,172,859 (GRCm39) |
N164S |
probably benign |
Het |
| Dnah1 |
T |
C |
14: 31,025,741 (GRCm39) |
|
probably benign |
Het |
| Elp1 |
G |
A |
4: 56,794,139 (GRCm39) |
T168I |
probably damaging |
Het |
| Erbb4 |
C |
A |
1: 68,779,560 (GRCm39) |
R72L |
probably damaging |
Het |
| F11r |
A |
G |
1: 171,288,916 (GRCm39) |
K178R |
probably benign |
Het |
| Fan1 |
A |
G |
7: 64,016,309 (GRCm39) |
L605P |
probably damaging |
Het |
| Fcna |
A |
G |
2: 25,516,018 (GRCm39) |
|
probably null |
Het |
| Filip1 |
A |
G |
9: 79,726,009 (GRCm39) |
I870T |
possibly damaging |
Het |
| Gm11595 |
C |
T |
11: 99,662,861 (GRCm39) |
C273Y |
unknown |
Het |
| Gml |
T |
A |
15: 74,685,548 (GRCm39) |
I146L |
possibly damaging |
Het |
| Gprc5b |
G |
A |
7: 118,583,437 (GRCm39) |
A144V |
possibly damaging |
Het |
| Htr2a |
A |
T |
14: 74,879,581 (GRCm39) |
H70L |
probably benign |
Het |
| Ifitm6 |
T |
A |
7: 140,596,627 (GRCm39) |
I69F |
possibly damaging |
Het |
| Iqsec3 |
A |
G |
6: 121,353,187 (GRCm39) |
S1144P |
probably damaging |
Het |
| Kazn |
T |
C |
4: 141,834,203 (GRCm39) |
T618A |
unknown |
Het |
| Mrps5 |
C |
A |
2: 127,433,755 (GRCm39) |
T48K |
possibly damaging |
Het |
| Mst1 |
A |
G |
9: 107,960,147 (GRCm39) |
E377G |
possibly damaging |
Het |
| Nup188 |
G |
A |
2: 30,199,890 (GRCm39) |
D305N |
probably damaging |
Het |
| Opn4 |
A |
T |
14: 34,321,789 (GRCm39) |
S43T |
probably benign |
Het |
| Or8k35 |
T |
C |
2: 86,424,908 (GRCm39) |
D88G |
probably benign |
Het |
| Plcb2 |
T |
C |
2: 118,541,274 (GRCm39) |
E1021G |
probably damaging |
Het |
| Pramex1 |
A |
T |
X: 134,514,374 (GRCm39) |
L305Q |
probably damaging |
Het |
| Rbsn |
T |
A |
6: 92,166,800 (GRCm39) |
T615S |
probably benign |
Het |
| Reg1 |
A |
G |
6: 78,404,013 (GRCm39) |
D60G |
probably null |
Het |
| Ros1 |
A |
T |
10: 51,994,328 (GRCm39) |
D1317E |
probably damaging |
Het |
| Rpap2 |
A |
G |
5: 107,751,738 (GRCm39) |
I129V |
probably damaging |
Het |
| Rubcnl |
G |
T |
14: 75,287,143 (GRCm39) |
V604L |
possibly damaging |
Het |
| Slc26a4 |
T |
A |
12: 31,590,532 (GRCm39) |
K374* |
probably null |
Het |
| Slc4a4 |
T |
A |
5: 89,362,452 (GRCm39) |
S854R |
probably damaging |
Het |
| Sv2c |
A |
G |
13: 96,123,341 (GRCm39) |
|
probably benign |
Het |
| Syce1 |
C |
A |
7: 140,359,809 (GRCm39) |
L83F |
probably damaging |
Het |
| Tnik |
A |
G |
3: 28,658,430 (GRCm39) |
S572G |
probably damaging |
Het |
| Trbv13-3 |
T |
C |
6: 41,107,120 (GRCm39) |
C14R |
probably benign |
Het |
| Ttc7 |
G |
A |
17: 87,597,679 (GRCm39) |
D84N |
possibly damaging |
Het |
| Ubtd1 |
G |
T |
19: 42,020,555 (GRCm39) |
G100* |
probably null |
Het |
| Vmn2r18 |
A |
T |
5: 151,508,711 (GRCm39) |
W138R |
probably damaging |
Het |
| Zan |
T |
C |
5: 137,462,201 (GRCm39) |
T993A |
unknown |
Het |
| Zfp385b |
C |
T |
2: 77,549,836 (GRCm39) |
G83D |
probably benign |
Het |
| Zfp493 |
A |
G |
13: 67,932,038 (GRCm39) |
|
probably benign |
Het |
|
| Other mutations in Dhx37 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01123:Dhx37
|
APN |
5 |
125,496,152 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
IGL02010:Dhx37
|
APN |
5 |
125,495,777 (GRCm39) |
missense |
possibly damaging |
0.58 |
|
IGL02412:Dhx37
|
APN |
5 |
125,508,692 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL02484:Dhx37
|
APN |
5 |
125,496,401 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
IGL02986:Dhx37
|
APN |
5 |
125,496,379 (GRCm39) |
missense |
probably damaging |
1.00 |
|
FR4304:Dhx37
|
UTSW |
5 |
125,504,594 (GRCm39) |
unclassified |
probably benign |
|
|
R0010:Dhx37
|
UTSW |
5 |
125,508,680 (GRCm39) |
missense |
probably benign |
0.02 |
|
R0019:Dhx37
|
UTSW |
5 |
125,507,098 (GRCm39) |
missense |
probably benign |
0.36 |
|
R0485:Dhx37
|
UTSW |
5 |
125,499,295 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0959:Dhx37
|
UTSW |
5 |
125,500,496 (GRCm39) |
missense |
probably benign |
|
|
R1101:Dhx37
|
UTSW |
5 |
125,492,216 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1132:Dhx37
|
UTSW |
5 |
125,498,103 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R1309:Dhx37
|
UTSW |
5 |
125,494,502 (GRCm39) |
nonsense |
probably null |
|
|
R1777:Dhx37
|
UTSW |
5 |
125,506,995 (GRCm39) |
missense |
probably benign |
|
|
R2001:Dhx37
|
UTSW |
5 |
125,504,528 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2116:Dhx37
|
UTSW |
5 |
125,498,166 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R3826:Dhx37
|
UTSW |
5 |
125,508,677 (GRCm39) |
missense |
probably benign |
0.04 |
|
R3829:Dhx37
|
UTSW |
5 |
125,508,677 (GRCm39) |
missense |
probably benign |
0.04 |
|
R3830:Dhx37
|
UTSW |
5 |
125,508,677 (GRCm39) |
missense |
probably benign |
0.04 |
|
R5058:Dhx37
|
UTSW |
5 |
125,499,295 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5158:Dhx37
|
UTSW |
5 |
125,492,216 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5436:Dhx37
|
UTSW |
5 |
125,506,867 (GRCm39) |
missense |
probably benign |
|
|
R5789:Dhx37
|
UTSW |
5 |
125,498,103 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R5834:Dhx37
|
UTSW |
5 |
125,502,794 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6066:Dhx37
|
UTSW |
5 |
125,501,730 (GRCm39) |
missense |
probably benign |
0.18 |
|
R6490:Dhx37
|
UTSW |
5 |
125,496,196 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6967:Dhx37
|
UTSW |
5 |
125,499,231 (GRCm39) |
missense |
probably benign |
0.07 |
|
R7101:Dhx37
|
UTSW |
5 |
125,502,006 (GRCm39) |
nonsense |
probably null |
|
|
R8036:Dhx37
|
UTSW |
5 |
125,501,739 (GRCm39) |
missense |
probably benign |
|
|
R9177:Dhx37
|
UTSW |
5 |
125,507,958 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9294:Dhx37
|
UTSW |
5 |
125,499,736 (GRCm39) |
missense |
probably benign |
|
|
Z1088:Dhx37
|
UTSW |
5 |
125,493,655 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
Z1177:Dhx37
|
UTSW |
5 |
125,502,536 (GRCm39) |
missense |
probably benign |
0.01 |
|
Z1177:Dhx37
|
UTSW |
5 |
125,502,044 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
| Predicted Primers |
PCR Primer
(F):5'- GGAAAAGACTTCTGTAGCCAACG -3'
(R):5'- TCTGGGTCCTAGCTCCTGAATG -3'
Sequencing Primer
(F):5'- GCAGCTGGCACTTTACTCCTG -3'
(R):5'- TGAATGTCCCAGGCCGTCAG -3'
|
| Posted On |
2015-04-29 |
Incidental Mutation