Incidental Mutation 'R4018:Cd300ld2'
ID 312030
Institutional Source Beutler Lab
Gene Symbol Cd300ld2
Ensembl Gene ENSMUSG00000089753
Gene Name CD300 molecule like family member D2
Synonyms Gm11709
MMRRC Submission 040848-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R4018 (G1)
Quality Score 225
Status Validated
Chromosome 11
Chromosomal Location 114901161-114907019 bp(-) (GRCm39)
Type of Mutation unclassified
DNA Base Change (assembly) G to T at 114903330 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000090120 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000092463] [ENSMUST00000106578]
AlphaFold A2A7W0
Predicted Effect probably benign
Transcript: ENSMUST00000092463
SMART Domains Protein: ENSMUSP00000090120
Gene: ENSMUSG00000089753

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
IG 25 124 2.11e-2 SMART
Predicted Effect unknown
Transcript: ENSMUST00000106578
AA Change: P172T
SMART Domains Protein: ENSMUSP00000102188
Gene: ENSMUSG00000089753
AA Change: P172T

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
IG 25 124 2.11e-2 SMART
low complexity region 131 201 N/A INTRINSIC
low complexity region 202 222 N/A INTRINSIC
transmembrane domain 240 262 N/A INTRINSIC
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.4%
  • 10x: 96.6%
  • 20x: 92.4%
Validation Efficiency 100% (33/33)
Allele List at MGI
Other mutations in this stock
Total: 29 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aga A G 8: 53,976,226 (GRCm39) K319R probably benign Het
Brip1 G T 11: 86,029,677 (GRCm39) T619K possibly damaging Het
Cd300lg A G 11: 101,932,420 (GRCm39) R2G probably damaging Het
Celsr2 C T 3: 108,302,281 (GRCm39) V2616I possibly damaging Het
Cfap251 A G 5: 123,460,517 (GRCm39) I1160V probably benign Het
Edem3 C T 1: 151,680,577 (GRCm39) probably benign Het
Endou T A 15: 97,616,818 (GRCm39) K235M probably damaging Het
Gm5431 T A 11: 48,779,995 (GRCm39) N309I probably damaging Het
Il4 T A 11: 53,504,806 (GRCm39) probably benign Het
Iws1 C A 18: 32,203,205 (GRCm39) S27* probably null Het
Kdm5d T C Y: 910,441 (GRCm39) probably benign Het
Ldb3 T C 14: 34,274,128 (GRCm39) probably benign Het
Llgl2 A G 11: 115,738,438 (GRCm39) T284A probably benign Het
Maml1 A T 11: 50,156,611 (GRCm39) N521K probably damaging Het
Mlxipl T C 5: 135,161,526 (GRCm39) Y482H probably damaging Het
Notch2 G T 3: 98,011,881 (GRCm39) C633F probably damaging Het
Oc90 T C 15: 65,759,457 (GRCm39) D232G probably benign Het
Or5b101 T C 19: 13,005,189 (GRCm39) E168G probably benign Het
Polr2a T C 11: 69,625,885 (GRCm39) Y1717C unknown Het
Prkca T A 11: 107,830,428 (GRCm39) I221F probably damaging Het
Rab3c T A 13: 110,220,728 (GRCm39) K144N probably damaging Het
Ryr2 T A 13: 11,933,300 (GRCm39) N57I probably damaging Het
Scyl3 A G 1: 163,764,068 (GRCm39) T145A possibly damaging Het
Septin4 G A 11: 87,475,947 (GRCm39) R162Q probably damaging Het
Slc25a39 A T 11: 102,295,850 (GRCm39) L127H probably damaging Het
Slc9a9 T C 9: 94,567,216 (GRCm39) V95A probably benign Het
Tsc2 T C 17: 24,844,255 (GRCm39) I279V probably damaging Het
Usp34 C T 11: 23,439,033 (GRCm39) P3532S possibly damaging Het
Vmn2r6 T C 3: 64,463,893 (GRCm39) I314V probably benign Het
Other mutations in Cd300ld2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01012:Cd300ld2 APN 11 114,903,123 (GRCm39) missense probably benign 0.23
IGL01450:Cd300ld2 APN 11 114,903,369 (GRCm39) unclassified probably benign
IGL01452:Cd300ld2 APN 11 114,903,428 (GRCm39) unclassified probably benign
IGL02086:Cd300ld2 APN 11 114,903,384 (GRCm39) unclassified probably benign
IGL02111:Cd300ld2 APN 11 114,903,219 (GRCm39) unclassified probably benign
IGL02505:Cd300ld2 APN 11 114,904,513 (GRCm39) missense probably benign 0.11
IGL02517:Cd300ld2 APN 11 114,901,249 (GRCm39) missense possibly damaging 0.53
IGL02836:Cd300ld2 APN 11 114,904,576 (GRCm39) missense probably benign 0.07
IGL03081:Cd300ld2 APN 11 114,903,368 (GRCm39) unclassified probably benign
PIT4486001:Cd300ld2 UTSW 11 114,903,257 (GRCm39) small deletion probably benign
R0579:Cd300ld2 UTSW 11 114,903,125 (GRCm39) missense probably benign 0.23
R1065:Cd300ld2 UTSW 11 114,904,586 (GRCm39) missense probably damaging 1.00
R1393:Cd300ld2 UTSW 11 114,903,404 (GRCm39) unclassified probably benign
R1481:Cd300ld2 UTSW 11 114,903,459 (GRCm39) missense probably benign 0.36
R1583:Cd300ld2 UTSW 11 114,904,603 (GRCm39) missense probably benign 0.06
R1755:Cd300ld2 UTSW 11 114,904,601 (GRCm39) missense probably benign 0.01
R1865:Cd300ld2 UTSW 11 114,903,444 (GRCm39) unclassified probably benign
R5516:Cd300ld2 UTSW 11 114,903,270 (GRCm39) unclassified probably benign
R6065:Cd300ld2 UTSW 11 114,903,428 (GRCm39) unclassified probably benign
R6927:Cd300ld2 UTSW 11 114,904,619 (GRCm39) missense probably damaging 1.00
R7874:Cd300ld2 UTSW 11 114,903,257 (GRCm39) small deletion probably benign
R7883:Cd300ld2 UTSW 11 114,903,257 (GRCm39) small deletion probably benign
R8044:Cd300ld2 UTSW 11 114,904,545 (GRCm39) nonsense probably null
R8263:Cd300ld2 UTSW 11 114,903,192 (GRCm39) missense unknown
R8306:Cd300ld2 UTSW 11 114,904,648 (GRCm39) missense probably benign 0.04
R8424:Cd300ld2 UTSW 11 114,903,257 (GRCm39) small deletion probably benign
R8808:Cd300ld2 UTSW 11 114,903,257 (GRCm39) small deletion probably benign
R8847:Cd300ld2 UTSW 11 114,903,257 (GRCm39) small deletion probably benign
R9090:Cd300ld2 UTSW 11 114,904,550 (GRCm39) missense probably damaging 1.00
R9176:Cd300ld2 UTSW 11 114,904,772 (GRCm39) nonsense probably null
R9271:Cd300ld2 UTSW 11 114,904,550 (GRCm39) missense probably damaging 1.00
R9494:Cd300ld2 UTSW 11 114,901,249 (GRCm39) missense possibly damaging 0.53
R9564:Cd300ld2 UTSW 11 114,903,257 (GRCm39) small deletion probably benign
R9720:Cd300ld2 UTSW 11 114,903,118 (GRCm39) critical splice donor site probably null
R9727:Cd300ld2 UTSW 11 114,903,257 (GRCm39) small deletion probably benign
Predicted Primers PCR Primer
(F):5'- TGCCAATGCTCTCCATGGTTG -3'
(R):5'- TCGAGCTCCTTAATTCCTAGGG -3'

Sequencing Primer
(F):5'- CAATGCTCTCCATGGTTGGTGTTG -3'
(R):5'- TTCCTAGGGAAAGAACTTTAGGCC -3'
Posted On 2015-04-29