Incidental Mutation 'R3973:Scrn3'
ID 312923
Institutional Source Beutler Lab
Gene Symbol Scrn3
Ensembl Gene ENSMUSG00000008226
Gene Name secernin 3
Synonyms 4833415E20Rik
MMRRC Submission 040841-MU
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock # R3973 (G1)
Quality Score 225
Status Validated
Chromosome 2
Chromosomal Location 73312601-73337818 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to C at 73335777 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Serine to Proline at position 385 (S385P)
Ref Sequence ENSEMBL: ENSMUSP00000088320 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000090811]
AlphaFold Q3TMH2
Predicted Effect possibly damaging
Transcript: ENSMUST00000090811
AA Change: S385P

PolyPhen 2 Score 0.656 (Sensitivity: 0.87; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000088320
Gene: ENSMUSG00000008226
AA Change: S385P

DomainStartEndE-ValueType
Pfam:Peptidase_C69 50 268 4.7e-13 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000123621
Meta Mutation Damage Score 0.0855 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.4%
  • 10x: 96.8%
  • 20x: 93.3%
Validation Efficiency 98% (61/62)
Allele List at MGI
Other mutations in this stock
Total: 58 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2510039O18Rik T C 4: 147,945,031 I486T probably damaging Het
4921501E09Rik A T 17: 33,066,431 S466T probably benign Het
4933427D14Rik T C 11: 72,198,741 R106G probably damaging Het
Cfap54 A G 10: 92,839,471 S2863P possibly damaging Het
Copa T A 1: 172,121,245 S1155T probably benign Het
Crot T C 5: 8,977,541 T264A probably benign Het
Ddx3y G A Y: 1,267,170 A232V probably damaging Het
Dst T G 1: 34,011,898 V25G probably benign Het
Ehbp1 C T 11: 22,137,867 A406T probably benign Het
Eml5 A T 12: 98,802,465 probably benign Het
Eps8 A T 6: 137,509,155 M453K probably benign Het
Galnt3 T C 2: 66,107,030 D112G possibly damaging Het
Glra4 C T X: 136,762,793 A336T probably damaging Het
Gmppb A G 9: 108,050,139 D95G probably benign Het
Gprc6a T C 10: 51,628,448 Y100C possibly damaging Het
Gpx6 C A 13: 21,317,658 S150Y probably damaging Het
Hsd17b3 A T 13: 64,059,486 V247D probably damaging Het
Htr7 T C 19: 36,056,760 D165G probably damaging Het
Igha T C 12: 113,256,352 probably benign Het
Igsf10 A G 3: 59,331,924 C279R probably damaging Het
Irak4 A G 15: 94,554,740 E182G possibly damaging Het
Lipo3 A T 19: 33,558,323 V274E probably damaging Het
Lrpprc A C 17: 84,770,841 probably null Het
Mast1 T C 8: 84,918,764 Y684C probably damaging Het
Mdn1 T C 4: 32,722,363 F2382L probably benign Het
Mepe C T 5: 104,337,078 P28L probably benign Het
Mrgpra3 T A 7: 47,589,666 I171F probably benign Het
Muc2 T A 7: 141,746,804 probably benign Het
Myh3 C T 11: 67,096,436 Q1371* probably null Het
Nodal T A 10: 61,423,054 V90E probably benign Het
Npas4 A T 19: 4,986,551 H528Q probably benign Het
Nt5dc3 T C 10: 86,824,236 V382A probably damaging Het
Pcdh18 G A 3: 49,754,586 T293I probably damaging Het
Phf20l1 A G 15: 66,641,816 D947G probably damaging Het
Pla2r1 A G 2: 60,448,962 V758A probably benign Het
Plod2 G T 9: 92,598,619 G422* probably null Het
Ppp1r12a T C 10: 108,253,480 V660A probably benign Het
Prdm6 T C 18: 53,540,206 I186T possibly damaging Het
Prkd3 G A 17: 78,959,141 probably benign Het
Prrc2a A G 17: 35,157,932 L734P probably damaging Het
Rnf128 C A X: 139,664,522 L282I probably damaging Het
Rnf213 A G 11: 119,469,053 N4424S Het
Serpina1d A T 12: 103,767,848 S66T probably benign Het
Setd3 T C 12: 108,165,158 K3R possibly damaging Het
Slc2a7 A G 4: 150,158,210 probably null Het
Smad4 G T 18: 73,677,736 T59K possibly damaging Het
Spc25 A G 2: 69,202,601 L60P probably damaging Het
Stam A C 2: 14,138,961 H354P probably damaging Het
Tesk1 C T 4: 43,445,786 P280S possibly damaging Het
Tmem120a C G 5: 135,736,277 R254P probably benign Het
Traf5 T C 1: 191,997,876 T405A probably benign Het
Trav7-4 A G 14: 53,461,662 S89G probably benign Het
Tsc22d1 T C 14: 76,418,609 S761P probably damaging Het
Ugt1a10 C A 1: 88,216,140 H361N probably damaging Het
Ugt2b1 C A 5: 86,917,675 V502L probably benign Het
Vip T A 10: 5,642,590 S77T possibly damaging Het
Wdr72 A T 9: 74,218,697 M1025L probably benign Het
Zfp541 A G 7: 16,072,222 D94G probably damaging Het
Other mutations in Scrn3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02012:Scrn3 APN 2 73318429 critical splice donor site probably null
IGL02676:Scrn3 APN 2 73329871 missense probably benign
PIT4445001:Scrn3 UTSW 2 73318329 missense possibly damaging 0.90
PIT4519001:Scrn3 UTSW 2 73318424 missense possibly damaging 0.78
PIT4519001:Scrn3 UTSW 2 73331003 missense possibly damaging 0.95
R2105:Scrn3 UTSW 2 73329852 missense probably damaging 0.96
R3974:Scrn3 UTSW 2 73335777 missense possibly damaging 0.66
R3975:Scrn3 UTSW 2 73335777 missense possibly damaging 0.66
R4206:Scrn3 UTSW 2 73319501 critical splice donor site probably null
R5340:Scrn3 UTSW 2 73335810 nonsense probably null
R5545:Scrn3 UTSW 2 73335781 missense possibly damaging 0.64
R5852:Scrn3 UTSW 2 73331005 missense probably damaging 1.00
R6819:Scrn3 UTSW 2 73319482 missense probably damaging 0.98
R7664:Scrn3 UTSW 2 73319370 missense possibly damaging 0.90
R8260:Scrn3 UTSW 2 73335858 missense probably damaging 1.00
R8350:Scrn3 UTSW 2 73329769 missense possibly damaging 0.95
R8450:Scrn3 UTSW 2 73329769 missense possibly damaging 0.95
R8906:Scrn3 UTSW 2 73331008 missense probably benign 0.34
R8906:Scrn3 UTSW 2 73331011 missense possibly damaging 0.75
R8915:Scrn3 UTSW 2 73318292 missense probably damaging 0.99
R9355:Scrn3 UTSW 2 73335733 missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- AAGCTGCCTGTTCATTGGTACC -3'
(R):5'- TAATCAGATCTCCTTAGCATAGCTC -3'

Sequencing Primer
(F):5'- CTGAAGGTCCTGAGTTAAATCCCAG -3'
(R):5'- GCTCTATATCATTACCAGGGCAGTG -3'
Posted On 2015-04-30