Incidental Mutation 'R4027:Parp10'
ID 313060
Institutional Source Beutler Lab
Gene Symbol Parp10
Ensembl Gene ENSMUSG00000063268
Gene Name poly (ADP-ribose) polymerase family, member 10
Synonyms
MMRRC Submission 040850-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.097) question?
Stock # R4027 (G1)
Quality Score 225
Status Validated
Chromosome 15
Chromosomal Location 76117195-76127640 bp(-) (GRCm39)
Type of Mutation critical splice donor site (2 bp from exon)
DNA Base Change (assembly) A to G at 76125354 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000129765 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000075689] [ENSMUST00000075689] [ENSMUST00000165738] [ENSMUST00000165738]
AlphaFold Q8CIE4
Predicted Effect probably null
Transcript: ENSMUST00000075689
SMART Domains Protein: ENSMUSP00000075110
Gene: ENSMUSG00000063268

DomainStartEndE-ValueType
Blast:RRM_2 9 72 1e-13 BLAST
PDB:2DHX|A 9 98 1e-30 PDB
low complexity region 183 193 N/A INTRINSIC
low complexity region 275 285 N/A INTRINSIC
low complexity region 566 575 N/A INTRINSIC
low complexity region 579 593 N/A INTRINSIC
UIM 605 624 9.27e1 SMART
UIM 628 647 1.88e1 SMART
low complexity region 728 738 N/A INTRINSIC
Pfam:PARP 766 954 8.1e-38 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000075689
SMART Domains Protein: ENSMUSP00000075110
Gene: ENSMUSG00000063268

DomainStartEndE-ValueType
Blast:RRM_2 9 72 1e-13 BLAST
PDB:2DHX|A 9 98 1e-30 PDB
low complexity region 183 193 N/A INTRINSIC
low complexity region 275 285 N/A INTRINSIC
low complexity region 566 575 N/A INTRINSIC
low complexity region 579 593 N/A INTRINSIC
UIM 605 624 9.27e1 SMART
UIM 628 647 1.88e1 SMART
low complexity region 728 738 N/A INTRINSIC
Pfam:PARP 766 954 8.1e-38 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000165738
SMART Domains Protein: ENSMUSP00000129765
Gene: ENSMUSG00000063268

DomainStartEndE-ValueType
Blast:RRM_2 9 72 1e-13 BLAST
PDB:2DHX|A 9 98 1e-30 PDB
low complexity region 183 193 N/A INTRINSIC
low complexity region 275 285 N/A INTRINSIC
low complexity region 566 575 N/A INTRINSIC
low complexity region 579 593 N/A INTRINSIC
UIM 605 624 9.27e1 SMART
UIM 628 647 1.88e1 SMART
low complexity region 728 738 N/A INTRINSIC
Pfam:PARP 766 954 8.1e-38 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000165738
SMART Domains Protein: ENSMUSP00000129765
Gene: ENSMUSG00000063268

DomainStartEndE-ValueType
Blast:RRM_2 9 72 1e-13 BLAST
PDB:2DHX|A 9 98 1e-30 PDB
low complexity region 183 193 N/A INTRINSIC
low complexity region 275 285 N/A INTRINSIC
low complexity region 566 575 N/A INTRINSIC
low complexity region 579 593 N/A INTRINSIC
UIM 605 624 9.27e1 SMART
UIM 628 647 1.88e1 SMART
low complexity region 728 738 N/A INTRINSIC
Pfam:PARP 766 954 8.1e-38 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000166151
Meta Mutation Damage Score 0.9582 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.5%
  • 10x: 97.0%
  • 20x: 94.2%
Validation Efficiency 97% (60/62)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Poly(ADP-ribose) polymerases (PARPs), such as PARP10, regulate gene transcription by altering chromatin organization by adding ADP-ribose to histones. PARPs can also function as transcriptional cofactors (Yu et al., 2005 [PubMed 15674325]).[supplied by OMIM, Mar 2008]
Allele List at MGI
Other mutations in this stock
Total: 58 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930402F06Rik A G 2: 35,270,408 (GRCm39) F98L probably damaging Het
Adam26b T C 8: 43,973,409 (GRCm39) N531S probably benign Het
Ahdc1 T C 4: 132,791,476 (GRCm39) S906P possibly damaging Het
Ank A G 15: 27,544,343 (GRCm39) N35D probably damaging Het
Ano10 A G 9: 122,081,994 (GRCm39) probably benign Het
Atp4a T C 7: 30,424,377 (GRCm39) probably null Het
C030005K15Rik T C 10: 97,561,404 (GRCm39) Y109C unknown Het
Carmil1 T A 13: 24,251,206 (GRCm39) probably benign Het
Ccl2 A G 11: 81,927,885 (GRCm39) R110G probably benign Het
Cntnap2 C A 6: 46,833,062 (GRCm39) F758L probably benign Het
Cog6 A C 3: 52,909,950 (GRCm39) D267E possibly damaging Het
Cyp4f37 G T 17: 32,850,646 (GRCm39) E366D probably benign Het
Dcun1d4 A G 5: 73,691,980 (GRCm39) D89G probably damaging Het
Dpep1 T C 8: 123,920,892 (GRCm39) V24A probably benign Het
Eefsec T C 6: 88,353,232 (GRCm39) I48V probably benign Het
Elmo2 G A 2: 165,136,169 (GRCm39) Q195* probably null Het
Ephb3 A G 16: 21,040,447 (GRCm39) D561G probably damaging Het
Erich2 C A 2: 70,343,134 (GRCm39) probably benign Het
Gatm A G 2: 122,427,927 (GRCm39) V362A probably damaging Het
Gdf10 A G 14: 33,654,572 (GRCm39) M360V probably damaging Het
Gpr141 T C 13: 19,935,995 (GRCm39) N260S probably benign Het
Hectd1 T A 12: 51,849,219 (GRCm39) probably null Het
Insrr A G 3: 87,716,906 (GRCm39) E682G probably benign Het
Itgax A G 7: 127,740,438 (GRCm39) I742V possibly damaging Het
Kcnh1 T C 1: 191,959,007 (GRCm39) V187A probably benign Het
Kdm6b G T 11: 69,297,094 (GRCm39) S419R possibly damaging Het
Kmt2a A T 9: 44,747,990 (GRCm39) probably benign Het
Krt10 A G 11: 99,277,019 (GRCm39) probably benign Het
Lct G A 1: 128,212,918 (GRCm39) R1912C probably benign Het
Lefty1 T C 1: 180,765,346 (GRCm39) S305P probably benign Het
Mast3 A G 8: 71,240,552 (GRCm39) L279P probably damaging Het
Mfsd4b3-ps T C 10: 39,823,343 (GRCm39) T306A probably benign Het
Mgam G A 6: 40,731,836 (GRCm39) R1351Q probably damaging Het
Mknk1 T A 4: 115,721,758 (GRCm39) F101I probably damaging Het
Mlc1 T C 15: 88,850,697 (GRCm39) I154V probably benign Het
Myo5b T C 18: 74,892,311 (GRCm39) I1685T possibly damaging Het
Nacc2 T A 2: 25,950,348 (GRCm39) M463L probably benign Het
Nek11 A C 9: 105,121,589 (GRCm39) Y443* probably null Het
Nme4 T C 17: 26,313,196 (GRCm39) probably null Het
Nova1 A G 12: 46,863,801 (GRCm39) probably benign Het
Or52h9 A T 7: 104,202,530 (GRCm39) I135F possibly damaging Het
Pkd1l3 T A 8: 110,350,603 (GRCm39) S483T possibly damaging Het
Plce1 T C 19: 38,512,709 (GRCm39) S3P probably damaging Het
Pnldc1 T C 17: 13,109,666 (GRCm39) D400G probably benign Het
Polr2b G A 5: 77,496,252 (GRCm39) R1141H possibly damaging Het
Prmt6 A G 3: 110,157,257 (GRCm39) I344T probably damaging Het
Psmd2 G A 16: 20,481,955 (GRCm39) G896D probably damaging Het
Ranbp17 C T 11: 33,450,718 (GRCm39) R73Q possibly damaging Het
Rcn1 G T 2: 105,229,395 (GRCm39) Y52* probably null Het
Reck T C 4: 43,922,931 (GRCm39) I402T probably damaging Het
Tecpr1 C A 5: 144,143,077 (GRCm39) A735S probably benign Het
Tshz1 T C 18: 84,032,954 (GRCm39) K485E possibly damaging Het
Ube4a G A 9: 44,861,198 (GRCm39) probably benign Het
Vldlr A G 19: 27,215,713 (GRCm39) T237A probably benign Het
Vmn1r74 C A 7: 11,580,898 (GRCm39) T66K probably damaging Het
Wdr49 C A 3: 75,230,972 (GRCm39) L563F probably benign Het
Zmym1 C T 4: 126,943,672 (GRCm39) V239I probably benign Het
Zmym5 T A 14: 57,035,268 (GRCm39) T267S probably benign Het
Other mutations in Parp10
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01376:Parp10 APN 15 76,125,877 (GRCm39) missense probably benign 0.09
IGL01419:Parp10 APN 15 76,125,588 (GRCm39) missense probably damaging 1.00
PIT4687001:Parp10 UTSW 15 76,125,122 (GRCm39) missense probably benign 0.00
R0053:Parp10 UTSW 15 76,126,446 (GRCm39) missense probably damaging 1.00
R0053:Parp10 UTSW 15 76,126,446 (GRCm39) missense probably damaging 1.00
R0126:Parp10 UTSW 15 76,127,266 (GRCm39) missense probably damaging 0.98
R0207:Parp10 UTSW 15 76,126,833 (GRCm39) missense probably benign 0.00
R1300:Parp10 UTSW 15 76,126,190 (GRCm39) missense possibly damaging 0.93
R1412:Parp10 UTSW 15 76,127,284 (GRCm39) missense probably damaging 0.99
R1510:Parp10 UTSW 15 76,125,617 (GRCm39) missense probably damaging 1.00
R1670:Parp10 UTSW 15 76,126,270 (GRCm39) missense probably benign 0.01
R1875:Parp10 UTSW 15 76,127,051 (GRCm39) missense probably damaging 1.00
R2219:Parp10 UTSW 15 76,117,783 (GRCm39) missense probably damaging 1.00
R2351:Parp10 UTSW 15 76,127,056 (GRCm39) missense probably benign
R4659:Parp10 UTSW 15 76,127,185 (GRCm39) missense probably damaging 1.00
R4763:Parp10 UTSW 15 76,117,627 (GRCm39) missense probably damaging 0.99
R4828:Parp10 UTSW 15 76,127,281 (GRCm39) missense probably benign 0.00
R5066:Parp10 UTSW 15 76,125,146 (GRCm39) splice site probably benign
R5090:Parp10 UTSW 15 76,125,925 (GRCm39) missense probably damaging 0.97
R5495:Parp10 UTSW 15 76,127,366 (GRCm39) missense probably benign
R6271:Parp10 UTSW 15 76,126,202 (GRCm39) missense probably benign
R6335:Parp10 UTSW 15 76,126,388 (GRCm39) missense probably benign 0.00
R6503:Parp10 UTSW 15 76,126,684 (GRCm39) missense probably damaging 1.00
R6606:Parp10 UTSW 15 76,124,308 (GRCm39) missense possibly damaging 0.66
R6868:Parp10 UTSW 15 76,127,306 (GRCm39) missense probably damaging 1.00
R7197:Parp10 UTSW 15 76,126,616 (GRCm39) missense probably damaging 1.00
R8496:Parp10 UTSW 15 76,117,749 (GRCm39) missense probably damaging 1.00
R8678:Parp10 UTSW 15 76,117,599 (GRCm39) missense probably damaging 1.00
R9053:Parp10 UTSW 15 76,125,964 (GRCm39) missense possibly damaging 0.95
X0027:Parp10 UTSW 15 76,125,704 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CTCGGACGTCCTCTAAAGAC -3'
(R):5'- AGATGGAGTTCTACCTTTGTCC -3'

Sequencing Primer
(F):5'- TCGGACGTCCTCTAAAGACAAAGG -3'
(R):5'- TCTTCCCACAGACAGATC -3'
Posted On 2015-04-30