Incidental Mutation 'R4151:Vmn2r104'
ID 314921
Institutional Source Beutler Lab
Gene Symbol Vmn2r104
Ensembl Gene ENSMUSG00000090315
Gene Name vomeronasal 2, receptor 104
Synonyms V2r7
MMRRC Submission 040861-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.108) question?
Stock # R4151 (G1)
Quality Score 225
Status Not validated
Chromosome 17
Chromosomal Location 20249687-20268467 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 20250147 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Asparagine at position 708 (I708N)
Ref Sequence ENSEMBL: ENSMUSP00000129895 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000168050]
AlphaFold E9Q2J5
Predicted Effect probably damaging
Transcript: ENSMUST00000168050
AA Change: I708N

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000129895
Gene: ENSMUSG00000090315
AA Change: I708N

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 85 457 4e-38 PFAM
Pfam:NCD3G 512 565 2.1e-20 PFAM
Pfam:7tm_3 598 833 1.7e-52 PFAM
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.5%
  • 20x: 95.9%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ano10 C T 9: 122,090,601 (GRCm39) W237* probably null Het
Armc9 C T 1: 86,092,497 (GRCm39) T87M probably damaging Het
Astn2 C T 4: 65,647,557 (GRCm39) probably null Het
Atxn7l1 G A 12: 33,414,481 (GRCm39) V506M probably damaging Het
Cenpe A G 3: 134,920,914 (GRCm39) N36D probably benign Het
Cfap45 T A 1: 172,359,788 (GRCm39) I96N probably damaging Het
Cyp8b1 A T 9: 121,745,134 (GRCm39) V66D probably damaging Het
Dnajb6 C G 5: 29,961,234 (GRCm39) L118V probably benign Het
Dpy19l4 A G 4: 11,309,485 (GRCm39) S44P possibly damaging Het
Dync2li1 A G 17: 84,935,763 (GRCm39) H20R probably benign Het
Ecpas A T 4: 58,836,254 (GRCm39) S695R possibly damaging Het
Eif3g T C 9: 20,806,429 (GRCm39) D220G probably benign Het
Fbxo38 GTGCTGCTGCTGCTGCTGCTGC GTGCTGCTGCTGCTGCTGC 18: 62,648,399 (GRCm39) probably benign Het
Gata2 T A 6: 88,176,620 (GRCm39) H26Q probably damaging Het
Gle1 T C 2: 29,834,056 (GRCm39) I434T probably damaging Het
Gm5145 A G 17: 20,791,360 (GRCm39) E246G probably damaging Het
Ints10 T A 8: 69,247,250 (GRCm39) probably null Het
Kdr G T 5: 76,117,761 (GRCm39) A664E possibly damaging Het
Klhl1 A C 14: 96,755,752 (GRCm39) M1R probably null Het
Lama4 T A 10: 38,881,424 (GRCm39) F71Y probably benign Het
Madd C A 2: 90,973,428 (GRCm39) R1410L probably benign Het
Magi2 T C 5: 19,432,290 (GRCm39) S2P probably damaging Het
Map4k3 T C 17: 80,951,963 (GRCm39) K228R probably damaging Het
Mrpl43 A G 19: 44,994,175 (GRCm39) L148P possibly damaging Het
Msi2 G C 11: 88,608,870 (GRCm39) S16C probably damaging Het
Myo1e G T 9: 70,204,633 (GRCm39) G78* probably null Het
Notch2 T C 3: 98,054,387 (GRCm39) L2350S possibly damaging Het
Nptn G T 9: 58,550,825 (GRCm39) S168I probably benign Het
Nsmce2 A G 15: 59,473,214 (GRCm39) T244A probably benign Het
Or5aq6 C T 2: 86,923,514 (GRCm39) V76I probably benign Het
Ostn T A 16: 27,140,152 (GRCm39) S22T probably benign Het
Plekhb2 T G 1: 34,903,564 (GRCm39) F102V probably benign Het
Prkdc A G 16: 15,634,637 (GRCm39) D3594G probably benign Het
Psmd6 G C 14: 14,120,157 (GRCm38) L61V probably benign Het
Rbm33 C T 5: 28,592,938 (GRCm39) P573S probably damaging Het
Rfk A C 19: 17,372,672 (GRCm39) I65L probably benign Het
Rnf141 A T 7: 110,436,406 (GRCm39) D7E probably benign Het
Shank2 A T 7: 143,608,565 (GRCm39) K153M probably damaging Het
Slc30a2 A T 4: 134,071,359 (GRCm39) I31F probably benign Het
Slco3a1 G T 7: 74,009,586 (GRCm39) A243E probably damaging Het
Stab2 G A 10: 86,838,847 (GRCm39) T73I probably benign Het
Sufu G A 19: 46,438,411 (GRCm39) probably null Het
Sync C T 4: 129,187,519 (GRCm39) Q184* probably null Het
Tnfrsf25 G T 4: 152,204,258 (GRCm39) A376S probably damaging Het
Tnpo1 A T 13: 98,989,407 (GRCm39) I765N probably damaging Het
Ube2d2b A T 5: 107,978,747 (GRCm39) K133* probably null Het
Ulk3 C T 9: 57,499,650 (GRCm39) S217L possibly damaging Het
Upf2 C A 2: 5,966,516 (GRCm39) Q379K unknown Het
Vegfc T A 8: 54,530,824 (GRCm39) L4Q unknown Het
Other mutations in Vmn2r104
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00427:Vmn2r104 APN 17 20,258,501 (GRCm39) missense probably damaging 0.98
IGL01098:Vmn2r104 APN 17 20,268,358 (GRCm39) missense probably benign 0.27
IGL01333:Vmn2r104 APN 17 20,263,055 (GRCm39) missense probably benign 0.17
IGL01527:Vmn2r104 APN 17 20,263,158 (GRCm39) missense possibly damaging 0.82
IGL01773:Vmn2r104 APN 17 20,260,930 (GRCm39) missense probably benign 0.10
IGL01939:Vmn2r104 APN 17 20,250,187 (GRCm39) missense probably damaging 0.99
IGL02121:Vmn2r104 APN 17 20,262,056 (GRCm39) nonsense probably null
IGL02305:Vmn2r104 APN 17 20,263,118 (GRCm39) missense probably benign 0.09
IGL02374:Vmn2r104 APN 17 20,263,048 (GRCm39) missense probably benign 0.34
IGL03260:Vmn2r104 APN 17 20,263,083 (GRCm39) missense probably benign 0.05
IGL03366:Vmn2r104 APN 17 20,249,866 (GRCm39) missense probably damaging 1.00
R0091:Vmn2r104 UTSW 17 20,262,075 (GRCm39) missense possibly damaging 0.79
R0125:Vmn2r104 UTSW 17 20,250,069 (GRCm39) missense probably damaging 0.98
R0257:Vmn2r104 UTSW 17 20,249,889 (GRCm39) missense probably damaging 1.00
R0381:Vmn2r104 UTSW 17 20,268,264 (GRCm39) nonsense probably null
R0709:Vmn2r104 UTSW 17 20,263,166 (GRCm39) missense probably damaging 1.00
R0786:Vmn2r104 UTSW 17 20,262,987 (GRCm39) missense probably benign
R1575:Vmn2r104 UTSW 17 20,262,477 (GRCm39) missense probably damaging 1.00
R1827:Vmn2r104 UTSW 17 20,262,497 (GRCm39) missense probably damaging 0.97
R1932:Vmn2r104 UTSW 17 20,261,031 (GRCm39) missense probably damaging 1.00
R1956:Vmn2r104 UTSW 17 20,262,313 (GRCm39) missense probably damaging 0.98
R2203:Vmn2r104 UTSW 17 20,250,083 (GRCm39) missense probably benign 0.05
R2205:Vmn2r104 UTSW 17 20,250,083 (GRCm39) missense probably benign 0.05
R2859:Vmn2r104 UTSW 17 20,268,455 (GRCm39) missense possibly damaging 0.82
R3701:Vmn2r104 UTSW 17 20,249,818 (GRCm39) missense probably damaging 1.00
R3834:Vmn2r104 UTSW 17 20,250,183 (GRCm39) missense probably benign 0.02
R4470:Vmn2r104 UTSW 17 20,262,503 (GRCm39) missense probably damaging 1.00
R4625:Vmn2r104 UTSW 17 20,268,443 (GRCm39) missense probably benign 0.00
R4754:Vmn2r104 UTSW 17 20,261,030 (GRCm39) nonsense probably null
R4911:Vmn2r104 UTSW 17 20,250,288 (GRCm39) missense probably benign 0.00
R5270:Vmn2r104 UTSW 17 20,258,528 (GRCm39) missense probably damaging 1.00
R5279:Vmn2r104 UTSW 17 20,262,146 (GRCm39) missense probably benign 0.07
R5311:Vmn2r104 UTSW 17 20,250,163 (GRCm39) missense probably damaging 1.00
R5370:Vmn2r104 UTSW 17 20,250,450 (GRCm39) missense probably damaging 0.97
R5461:Vmn2r104 UTSW 17 20,250,343 (GRCm39) missense probably damaging 1.00
R5683:Vmn2r104 UTSW 17 20,260,981 (GRCm39) nonsense probably null
R5795:Vmn2r104 UTSW 17 20,250,372 (GRCm39) missense probably benign 0.02
R5795:Vmn2r104 UTSW 17 20,250,544 (GRCm39) missense possibly damaging 0.89
R5970:Vmn2r104 UTSW 17 20,249,733 (GRCm39) missense probably benign 0.01
R5983:Vmn2r104 UTSW 17 20,261,970 (GRCm39) missense probably damaging 1.00
R5992:Vmn2r104 UTSW 17 20,249,747 (GRCm39) missense probably damaging 1.00
R6066:Vmn2r104 UTSW 17 20,258,573 (GRCm39) missense possibly damaging 0.69
R6156:Vmn2r104 UTSW 17 20,261,909 (GRCm39) missense probably damaging 1.00
R6182:Vmn2r104 UTSW 17 20,250,507 (GRCm39) missense probably benign 0.16
R6245:Vmn2r104 UTSW 17 20,261,829 (GRCm39) missense possibly damaging 0.69
R6333:Vmn2r104 UTSW 17 20,249,848 (GRCm39) missense probably benign 0.30
R6573:Vmn2r104 UTSW 17 20,262,487 (GRCm39) missense probably damaging 1.00
R7101:Vmn2r104 UTSW 17 20,250,358 (GRCm39) missense possibly damaging 0.65
R7123:Vmn2r104 UTSW 17 20,261,088 (GRCm39) missense probably benign 0.12
R7485:Vmn2r104 UTSW 17 20,249,737 (GRCm39) missense probably benign 0.01
R7514:Vmn2r104 UTSW 17 20,249,791 (GRCm39) missense probably damaging 1.00
R7634:Vmn2r104 UTSW 17 20,261,971 (GRCm39) missense possibly damaging 0.48
R7958:Vmn2r104 UTSW 17 20,262,988 (GRCm39) missense probably benign
R8031:Vmn2r104 UTSW 17 20,263,048 (GRCm39) missense probably benign 0.34
R8094:Vmn2r104 UTSW 17 20,250,483 (GRCm39) missense possibly damaging 0.77
R8191:Vmn2r104 UTSW 17 20,250,465 (GRCm39) missense possibly damaging 0.89
R8308:Vmn2r104 UTSW 17 20,261,040 (GRCm39) missense possibly damaging 0.55
R8691:Vmn2r104 UTSW 17 20,262,110 (GRCm39) missense probably damaging 0.98
R8795:Vmn2r104 UTSW 17 20,262,988 (GRCm39) missense probably benign
R8900:Vmn2r104 UTSW 17 20,261,924 (GRCm39) missense probably damaging 0.99
R8913:Vmn2r104 UTSW 17 20,249,968 (GRCm39) missense probably damaging 1.00
R9180:Vmn2r104 UTSW 17 20,263,087 (GRCm39) missense probably benign 0.00
R9199:Vmn2r104 UTSW 17 20,262,097 (GRCm39) missense probably damaging 0.99
R9282:Vmn2r104 UTSW 17 20,261,098 (GRCm39) missense probably damaging 1.00
R9303:Vmn2r104 UTSW 17 20,268,439 (GRCm39) missense possibly damaging 0.90
R9305:Vmn2r104 UTSW 17 20,268,439 (GRCm39) missense possibly damaging 0.90
R9322:Vmn2r104 UTSW 17 20,263,087 (GRCm39) missense probably benign 0.00
R9325:Vmn2r104 UTSW 17 20,268,433 (GRCm39) missense possibly damaging 0.95
R9414:Vmn2r104 UTSW 17 20,250,250 (GRCm39) missense probably damaging 0.99
R9785:Vmn2r104 UTSW 17 20,268,409 (GRCm39) missense probably benign
RF007:Vmn2r104 UTSW 17 20,268,302 (GRCm39) missense probably benign 0.36
Z1177:Vmn2r104 UTSW 17 20,250,051 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- ATGGTATAACTCCCAAGGGCC -3'
(R):5'- TGTCAAGGCCAATAATCGGACTC -3'

Sequencing Primer
(F):5'- GGCCAAGAAACAGAGGTATCCC -3'
(R):5'- GGCCAATAATCGGACTCTAAGTTAC -3'
Posted On 2015-05-14