Incidental Mutation 'R0389:Xdh'
ID 31543
Institutional Source Beutler Lab
Gene Symbol Xdh
Ensembl Gene ENSMUSG00000024066
Gene Name xanthine dehydrogenase
Synonyms Xox-1, XO, Xor, Xox1, xanthine oxidase
MMRRC Submission 038595-MU
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.453) question?
Stock # R0389 (G1)
Quality Score 225
Status Not validated
Chromosome 17
Chromosomal Location 74190890-74257191 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 74205357 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Histidine to Leucine at position 1036 (H1036L)
Ref Sequence ENSEMBL: ENSMUSP00000024866 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000024866]
AlphaFold Q00519
Predicted Effect probably damaging
Transcript: ENSMUST00000024866
AA Change: H1036L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000024866
Gene: ENSMUSG00000024066
AA Change: H1036L

DomainStartEndE-ValueType
Pfam:Fer2 11 81 5e-12 PFAM
Pfam:Fer2_2 90 163 4.1e-31 PFAM
low complexity region 169 182 N/A INTRINSIC
Pfam:FAD_binding_5 234 414 4.9e-47 PFAM
CO_deh_flav_C 421 525 1.16e-24 SMART
Ald_Xan_dh_C 590 696 1.23e-46 SMART
Pfam:Ald_Xan_dh_C2 704 1239 1e-200 PFAM
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.1%
  • 10x: 95.9%
  • 20x: 91.5%
Validation Efficiency
MGI Phenotype FUNCTION: This gene encodes a member of the xanthine dehydrogenase protein family. The encoded protein has been identified as a moonlighting protein based on its ability to perform mechanistically distinct functions. The encoded protein exists as two distinct enzymatic forms, either as xanthine dehydrogenase, or as xanthine oxidase, and functions in purine degradation. Additional studies also suggest a role in adipogenesis, and a function as a structural protein in milk fat droplets in the lactating mammary gland. [provided by RefSeq, Jan 2014]
PHENOTYPE: Homozygotes for a null allele are small and die prematurely while heterozygous females show a lactation defect. Most homozygotes for another null allele die within the first month of renal failure associated with uric acid depletion, renal tubular damage, inflammation, fibrosis and oxidative stress. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 104 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930432M17Rik G A 3: 121,465,053 (GRCm39) E30K unknown Het
Abi3bp A T 16: 56,491,670 (GRCm39) T1319S possibly damaging Het
Adam18 T C 8: 25,119,653 (GRCm39) probably null Het
Adgre1 G A 17: 57,713,839 (GRCm39) D175N possibly damaging Het
Adgrf1 T C 17: 43,614,679 (GRCm39) probably null Het
Ankhd1 A G 18: 36,777,652 (GRCm39) S1612G possibly damaging Het
Anks1 A G 17: 28,214,926 (GRCm39) R458G possibly damaging Het
Cacna1g C T 11: 94,350,523 (GRCm39) V441M probably damaging Het
Cadps2 A T 6: 23,321,781 (GRCm39) V1037E possibly damaging Het
Casz1 T C 4: 149,033,368 (GRCm39) V1380A possibly damaging Het
Cenpq T C 17: 41,244,085 (GRCm39) probably benign Het
Chrac1 T C 15: 72,965,376 (GRCm39) I93T possibly damaging Het
Cntnap2 T A 6: 45,986,571 (GRCm39) S359T probably benign Het
Col6a6 C A 9: 105,661,403 (GRCm39) M235I probably benign Het
Crat T C 2: 30,293,640 (GRCm39) probably benign Het
Cyp1a2 T C 9: 57,589,308 (GRCm39) N169D probably benign Het
Dennd1c T A 17: 57,374,649 (GRCm39) T499S probably benign Het
Dst A G 1: 34,333,631 (GRCm39) probably null Het
Dync2h1 G T 9: 7,167,244 (GRCm39) probably null Het
Eif3h C A 15: 51,662,660 (GRCm39) V129F probably damaging Het
Eno2 A G 6: 124,739,654 (GRCm39) F380L probably damaging Het
Ergic2 T A 6: 148,084,700 (GRCm39) I34F probably benign Het
Ergic3 G A 2: 155,858,707 (GRCm39) V278M probably benign Het
Fam185a C T 5: 21,664,283 (GRCm39) T339M probably damaging Het
Fam20b A T 1: 156,509,023 (GRCm39) D396E probably benign Het
Fasn G T 11: 120,707,008 (GRCm39) D881E probably damaging Het
Fat1 C A 8: 45,403,385 (GRCm39) H45Q probably benign Het
Fbxw16 A T 9: 109,261,550 (GRCm39) C439S probably benign Het
Garin1a T A 6: 29,281,391 (GRCm39) V43E possibly damaging Het
Gba2 A T 4: 43,570,832 (GRCm39) F280Y probably damaging Het
Gfm1 A G 3: 67,365,251 (GRCm39) I517V probably benign Het
Gng13 C T 17: 25,937,696 (GRCm39) Q8* probably null Het
Golga1 A T 2: 38,908,453 (GRCm39) S749T probably damaging Het
Gphn A T 12: 78,637,433 (GRCm39) I381F probably damaging Het
Grm3 T C 5: 9,554,794 (GRCm39) N833D probably damaging Het
Gstt2 G T 10: 75,668,266 (GRCm39) T163K probably damaging Het
Gusb A T 5: 130,026,927 (GRCm39) V388E probably damaging Het
Hcrtr2 A T 9: 76,153,662 (GRCm39) Y243* probably null Het
Hspg2 A G 4: 137,242,734 (GRCm39) T650A possibly damaging Het
Ints2 C T 11: 86,139,677 (GRCm39) V306I probably damaging Het
Itga1 T A 13: 115,128,996 (GRCm39) D554V probably benign Het
Itgam C T 7: 127,680,806 (GRCm39) A245V probably damaging Het
Kcnk15 A G 2: 163,700,243 (GRCm39) T161A probably benign Het
Klhl18 A T 9: 110,257,749 (GRCm39) C564S probably benign Het
Krt40 T A 11: 99,432,540 (GRCm39) R159* probably null Het
L3mbtl4 G A 17: 68,762,775 (GRCm39) V103M probably damaging Het
Lnx2 C A 5: 146,955,850 (GRCm39) V649L possibly damaging Het
Lpp A T 16: 24,426,991 (GRCm39) Q39H probably damaging Het
Lrpprc A T 17: 85,060,540 (GRCm39) probably null Het
Map3k19 A T 1: 127,750,152 (GRCm39) N1066K probably benign Het
Mbtps2 G T X: 156,351,364 (GRCm39) T134K probably benign Het
Mfng C T 15: 78,648,637 (GRCm39) V147M possibly damaging Het
Mks1 T C 11: 87,748,754 (GRCm39) S273P probably benign Het
Myh2 T C 11: 67,071,647 (GRCm39) L488P probably damaging Het
Myo15a A G 11: 60,369,364 (GRCm39) N708S probably benign Het
Myo6 A T 9: 80,199,748 (GRCm39) N1019I probably damaging Het
Myrf G C 19: 10,195,526 (GRCm39) T428S probably benign Het
Ncoa1 T G 12: 4,345,976 (GRCm39) N457T probably benign Het
Neb T C 2: 52,051,489 (GRCm39) probably null Het
Nlrp4e C A 7: 23,054,628 (GRCm39) N927K probably damaging Het
Npffr2 T C 5: 89,730,613 (GRCm39) M181T probably benign Het
Nxf7 A T X: 134,485,132 (GRCm39) C495S possibly damaging Het
Oas1g T C 5: 121,025,592 (GRCm39) T12A probably benign Het
Or11g2 T A 14: 50,856,036 (GRCm39) L119Q probably damaging Het
Or1e17 T A 11: 73,831,879 (GRCm39) V269E probably benign Het
Or2g7 C G 17: 38,378,562 (GRCm39) R167G possibly damaging Het
Or52s1b A T 7: 102,822,490 (GRCm39) V118E possibly damaging Het
Or5p60 A G 7: 107,724,023 (GRCm39) V149A probably benign Het
Papln C T 12: 83,830,153 (GRCm39) Q1008* probably null Het
Pcdhb10 A C 18: 37,545,485 (GRCm39) D187A probably damaging Het
Phf2 T A 13: 48,957,965 (GRCm39) E1016D unknown Het
Phf8 T A X: 150,335,618 (GRCm39) D197E probably benign Het
Pikfyve A G 1: 65,235,865 (GRCm39) H179R probably damaging Het
Prkcz T A 4: 155,353,597 (GRCm39) D250V probably damaging Het
Prpf4 A G 4: 62,340,842 (GRCm39) Y419C probably damaging Het
Prr15l C A 11: 96,825,440 (GRCm39) Y23* probably null Het
Prr5 T A 15: 84,587,152 (GRCm39) S301T probably benign Het
Psg16 T A 7: 16,829,088 (GRCm39) I224N probably benign Het
Radil A G 5: 142,529,226 (GRCm39) F186L probably damaging Het
Reg3g A T 6: 78,445,544 (GRCm39) M1K probably null Het
Rps6ka3 A G X: 158,100,963 (GRCm39) Y76C probably damaging Het
Rtl1 C T 12: 109,556,797 (GRCm39) V1681I possibly damaging Het
Sfmbt1 C T 14: 30,533,464 (GRCm39) R614C probably damaging Het
Slc12a4 A G 8: 106,678,599 (GRCm39) S244P probably benign Het
Sp140l2 T A 1: 85,247,773 (GRCm39) N5Y probably benign Het
Sptbn1 T C 11: 30,089,250 (GRCm39) T671A possibly damaging Het
Supt16 A T 14: 52,411,570 (GRCm39) N604K probably damaging Het
Synj2 G A 17: 6,080,058 (GRCm39) V1096I probably benign Het
Tas2r129 G T 6: 132,928,159 (GRCm39) C32F probably benign Het
Tbc1d25 T C X: 8,039,108 (GRCm39) Y140C probably damaging Het
Tdrd7 A G 4: 46,016,987 (GRCm39) D709G probably benign Het
Tfap2d C T 1: 19,174,591 (GRCm39) R15C possibly damaging Het
Tgfbi C A 13: 56,777,515 (GRCm39) T333N probably benign Het
Tnk1 T C 11: 69,746,508 (GRCm39) Y235C probably damaging Het
Ttc17 A G 2: 94,208,439 (GRCm39) F144S probably benign Het
Twnk G T 19: 44,996,578 (GRCm39) G337V possibly damaging Het
Unc13a A G 8: 72,110,676 (GRCm39) F464L probably benign Het
Usp17le C A 7: 104,417,667 (GRCm39) A492S probably damaging Het
Vmn1r213 A T 13: 23,195,932 (GRCm39) M172L probably benign Het
Vmn1r71 G A 7: 10,482,238 (GRCm39) T84I probably benign Het
Vmn2r109 C T 17: 20,761,336 (GRCm39) V674M probably damaging Het
Vmn2r19 A T 6: 123,312,945 (GRCm39) I672F possibly damaging Het
Vmn2r77 T C 7: 86,450,702 (GRCm39) V196A probably benign Het
Zfp930 T A 8: 69,680,948 (GRCm39) Y214* probably null Het
Other mutations in Xdh
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00493:Xdh APN 17 74,230,101 (GRCm39) missense possibly damaging 0.58
IGL00556:Xdh APN 17 74,191,430 (GRCm39) makesense probably null
IGL01524:Xdh APN 17 74,230,132 (GRCm39) critical splice acceptor site probably null
IGL01604:Xdh APN 17 74,216,332 (GRCm39) missense probably benign 0.02
IGL01625:Xdh APN 17 74,223,781 (GRCm39) critical splice donor site probably null
IGL01778:Xdh APN 17 74,207,275 (GRCm39) missense probably benign 0.00
IGL01804:Xdh APN 17 74,199,754 (GRCm39) missense probably damaging 1.00
IGL01825:Xdh APN 17 74,198,240 (GRCm39) missense probably damaging 1.00
IGL01929:Xdh APN 17 74,241,850 (GRCm39) missense probably damaging 1.00
IGL02068:Xdh APN 17 74,220,945 (GRCm39) missense probably damaging 1.00
IGL02079:Xdh APN 17 74,198,272 (GRCm39) missense probably damaging 1.00
IGL02210:Xdh APN 17 74,250,890 (GRCm39) missense probably benign 0.00
IGL02261:Xdh APN 17 74,220,960 (GRCm39) missense possibly damaging 0.81
IGL02365:Xdh APN 17 74,250,885 (GRCm39) missense probably benign 0.14
IGL02424:Xdh APN 17 74,233,565 (GRCm39) missense probably benign 0.00
IGL02491:Xdh APN 17 74,193,459 (GRCm39) missense probably damaging 0.99
IGL02525:Xdh APN 17 74,231,990 (GRCm39) missense possibly damaging 0.91
IGL02578:Xdh APN 17 74,213,241 (GRCm39) missense probably damaging 1.00
IGL02793:Xdh APN 17 74,207,576 (GRCm39) missense probably damaging 1.00
IGL02939:Xdh APN 17 74,250,840 (GRCm39) critical splice donor site probably null
IGL03327:Xdh APN 17 74,223,787 (GRCm39) missense probably benign
IGL03345:Xdh APN 17 74,213,027 (GRCm39) missense probably damaging 0.98
IGL03353:Xdh APN 17 74,202,781 (GRCm39) missense possibly damaging 0.65
inky UTSW 17 74,228,346 (GRCm39) missense probably damaging 1.00
nucleus UTSW 17 74,206,007 (GRCm39) nonsense probably null
squidgame UTSW 17 74,246,831 (GRCm39) missense probably benign
R0018:Xdh UTSW 17 74,232,020 (GRCm39) missense probably benign 0.00
R0018:Xdh UTSW 17 74,232,020 (GRCm39) missense probably benign 0.00
R0033:Xdh UTSW 17 74,214,627 (GRCm39) missense probably benign 0.06
R0079:Xdh UTSW 17 74,198,213 (GRCm39) missense probably damaging 1.00
R0086:Xdh UTSW 17 74,191,433 (GRCm39) missense probably benign
R0319:Xdh UTSW 17 74,213,096 (GRCm39) splice site probably benign
R0336:Xdh UTSW 17 74,229,458 (GRCm39) missense possibly damaging 0.91
R0684:Xdh UTSW 17 74,250,886 (GRCm39) missense probably damaging 0.97
R0930:Xdh UTSW 17 74,230,077 (GRCm39) missense probably benign 0.00
R1073:Xdh UTSW 17 74,246,831 (GRCm39) missense probably benign
R1114:Xdh UTSW 17 74,248,144 (GRCm39) splice site probably benign
R1201:Xdh UTSW 17 74,225,413 (GRCm39) missense probably benign 0.05
R1230:Xdh UTSW 17 74,198,251 (GRCm39) missense probably damaging 1.00
R1351:Xdh UTSW 17 74,230,073 (GRCm39) missense probably benign 0.02
R1470:Xdh UTSW 17 74,198,107 (GRCm39) missense probably damaging 1.00
R1470:Xdh UTSW 17 74,198,107 (GRCm39) missense probably damaging 1.00
R1485:Xdh UTSW 17 74,221,014 (GRCm39) nonsense probably null
R1548:Xdh UTSW 17 74,220,896 (GRCm39) missense probably damaging 0.98
R1637:Xdh UTSW 17 74,207,573 (GRCm39) missense probably benign
R1641:Xdh UTSW 17 74,233,547 (GRCm39) missense probably benign
R1758:Xdh UTSW 17 74,217,204 (GRCm39) missense probably damaging 1.00
R1951:Xdh UTSW 17 74,214,653 (GRCm39) missense probably damaging 1.00
R1969:Xdh UTSW 17 74,199,746 (GRCm39) missense possibly damaging 0.55
R2024:Xdh UTSW 17 74,228,300 (GRCm39) missense possibly damaging 0.92
R2080:Xdh UTSW 17 74,216,320 (GRCm39) missense probably damaging 1.00
R2157:Xdh UTSW 17 74,229,532 (GRCm39) missense probably damaging 1.00
R2300:Xdh UTSW 17 74,198,260 (GRCm39) missense probably damaging 1.00
R3783:Xdh UTSW 17 74,200,590 (GRCm39) splice site probably benign
R3796:Xdh UTSW 17 74,214,653 (GRCm39) missense probably damaging 1.00
R3797:Xdh UTSW 17 74,214,653 (GRCm39) missense probably damaging 1.00
R3798:Xdh UTSW 17 74,214,653 (GRCm39) missense probably damaging 1.00
R3799:Xdh UTSW 17 74,214,653 (GRCm39) missense probably damaging 1.00
R3819:Xdh UTSW 17 74,213,720 (GRCm39) missense probably benign 0.35
R4085:Xdh UTSW 17 74,223,874 (GRCm39) missense probably benign 0.35
R4240:Xdh UTSW 17 74,202,790 (GRCm39) missense possibly damaging 0.72
R4356:Xdh UTSW 17 74,222,685 (GRCm39) missense probably benign 0.01
R4522:Xdh UTSW 17 74,205,339 (GRCm39) missense probably damaging 1.00
R4523:Xdh UTSW 17 74,205,339 (GRCm39) missense probably damaging 1.00
R4524:Xdh UTSW 17 74,205,339 (GRCm39) missense probably damaging 1.00
R4600:Xdh UTSW 17 74,217,195 (GRCm39) missense probably benign 0.19
R4617:Xdh UTSW 17 74,225,389 (GRCm39) missense probably damaging 0.99
R4756:Xdh UTSW 17 74,193,381 (GRCm39) missense probably benign 0.24
R4761:Xdh UTSW 17 74,217,262 (GRCm39) missense possibly damaging 0.91
R4815:Xdh UTSW 17 74,213,210 (GRCm39) missense probably damaging 1.00
R4850:Xdh UTSW 17 74,205,330 (GRCm39) missense probably damaging 1.00
R4896:Xdh UTSW 17 74,217,238 (GRCm39) missense probably damaging 0.96
R4897:Xdh UTSW 17 74,207,703 (GRCm39) missense probably benign
R4923:Xdh UTSW 17 74,231,931 (GRCm39) missense possibly damaging 0.72
R4977:Xdh UTSW 17 74,205,965 (GRCm39) missense probably benign 0.05
R5030:Xdh UTSW 17 74,198,288 (GRCm39) missense probably damaging 1.00
R5185:Xdh UTSW 17 74,232,006 (GRCm39) missense probably damaging 1.00
R5347:Xdh UTSW 17 74,232,027 (GRCm39) missense probably benign
R5556:Xdh UTSW 17 74,204,759 (GRCm39) missense probably benign 0.21
R5566:Xdh UTSW 17 74,200,617 (GRCm39) missense probably damaging 1.00
R5568:Xdh UTSW 17 74,250,880 (GRCm39) missense possibly damaging 0.90
R5635:Xdh UTSW 17 74,220,870 (GRCm39) missense possibly damaging 0.92
R5662:Xdh UTSW 17 74,248,110 (GRCm39) missense probably damaging 0.99
R5955:Xdh UTSW 17 74,205,315 (GRCm39) missense probably damaging 1.00
R6058:Xdh UTSW 17 74,213,264 (GRCm39) missense probably damaging 1.00
R6061:Xdh UTSW 17 74,228,342 (GRCm39) missense probably damaging 1.00
R6412:Xdh UTSW 17 74,242,902 (GRCm39) missense probably benign 0.09
R6526:Xdh UTSW 17 74,207,546 (GRCm39) missense probably damaging 0.97
R6558:Xdh UTSW 17 74,200,708 (GRCm39) missense possibly damaging 0.95
R6843:Xdh UTSW 17 74,230,125 (GRCm39) missense probably damaging 1.00
R6932:Xdh UTSW 17 74,229,557 (GRCm39) missense probably damaging 0.99
R7028:Xdh UTSW 17 74,250,868 (GRCm39) missense probably damaging 0.99
R7418:Xdh UTSW 17 74,220,960 (GRCm39) missense possibly damaging 0.81
R7503:Xdh UTSW 17 74,233,205 (GRCm39) missense probably damaging 1.00
R7653:Xdh UTSW 17 74,204,040 (GRCm39) missense probably benign 0.10
R7763:Xdh UTSW 17 74,241,829 (GRCm39) missense possibly damaging 0.69
R7768:Xdh UTSW 17 74,246,831 (GRCm39) missense probably benign
R7904:Xdh UTSW 17 74,229,467 (GRCm39) missense probably benign 0.09
R8010:Xdh UTSW 17 74,216,312 (GRCm39) nonsense probably null
R8067:Xdh UTSW 17 74,207,652 (GRCm39) missense probably benign 0.01
R8238:Xdh UTSW 17 74,193,412 (GRCm39) missense probably benign
R8253:Xdh UTSW 17 74,225,377 (GRCm39) missense possibly damaging 0.94
R8346:Xdh UTSW 17 74,220,938 (GRCm39) missense probably damaging 1.00
R8350:Xdh UTSW 17 74,241,837 (GRCm39) missense probably damaging 1.00
R8381:Xdh UTSW 17 74,219,456 (GRCm39) missense probably benign
R8427:Xdh UTSW 17 74,242,926 (GRCm39) missense probably damaging 1.00
R8465:Xdh UTSW 17 74,206,007 (GRCm39) nonsense probably null
R8478:Xdh UTSW 17 74,213,053 (GRCm39) missense probably benign 0.00
R8680:Xdh UTSW 17 74,229,500 (GRCm39) missense probably benign
R8802:Xdh UTSW 17 74,225,405 (GRCm39) missense probably benign 0.00
R8984:Xdh UTSW 17 74,228,346 (GRCm39) missense probably damaging 1.00
R8985:Xdh UTSW 17 74,228,346 (GRCm39) missense probably damaging 1.00
R8995:Xdh UTSW 17 74,205,369 (GRCm39) missense probably damaging 1.00
R9035:Xdh UTSW 17 74,217,222 (GRCm39) missense probably benign
R9149:Xdh UTSW 17 74,222,688 (GRCm39) missense probably benign
R9181:Xdh UTSW 17 74,232,006 (GRCm39) missense probably damaging 1.00
R9357:Xdh UTSW 17 74,233,541 (GRCm39) critical splice donor site probably null
R9357:Xdh UTSW 17 74,214,711 (GRCm39) missense probably damaging 0.97
R9609:Xdh UTSW 17 74,231,990 (GRCm39) missense possibly damaging 0.91
R9803:Xdh UTSW 17 74,229,455 (GRCm39) missense probably benign
X0019:Xdh UTSW 17 74,225,449 (GRCm39) missense probably damaging 1.00
Z1088:Xdh UTSW 17 74,193,423 (GRCm39) missense probably benign
Z1176:Xdh UTSW 17 74,230,037 (GRCm39) critical splice donor site probably null
Z1177:Xdh UTSW 17 74,204,690 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- ACGGCCATGTGTGATGTTTTCTCAG -3'
(R):5'- GCTACAAGACAGTCACTCGGCTTC -3'

Sequencing Primer
(F):5'- GGCCTGATGCTTCTCCTGG -3'
(R):5'- CCAAATGTTGTGGTTGGCCTT -3'
Posted On 2013-04-24